Search results for "Dop"

showing 10 items of 4870 documents

Glutathione deficiency of the Arabidopsis mutant pad2-1 affects oxidative stress-related events, defense gene expression and hypersensitive response

2011

L'article original est publié par The American Society of Plant Biologists; International audience; The Arabidopsis (Arabidopsis thaliana) phytoalexin-deficient mutant pad2-1 displays enhanced susceptibility to a broad range of pathogens and herbivorous insects that correlates with deficiencies in the production of camalexin, indole glucosinolates, and salicylic acid (SA). The pad2-1 mutation is localized in the GLUTAMATE-CYSTEINE LIGASE (GCL) gene encoding the first enzyme of glutathione biosynthesis. While pad2-1 glutathione deficiency is not caused by a decrease in GCL transcripts, analysis of GCL protein level revealed that pad2-1 plants contained only 48% of the wild-type protein amoun…

0106 biological sciencesPhysiologyMutantGlutathione reductaseArabidopsisOligosaccharidesPlant Science01 natural scienceschemistry.chemical_compoundAnti-Infective AgentsGene Expression Regulation PlantCamalexinArabidopsis thaliana0303 health sciencesGlutathioneBiochemistryHost-Pathogen InteractionsDisease SusceptibilitySalicylic AcidOxidation-ReductionSignal TransductionHypersensitive responsePhytophthoradisease resistanceBiologyNitric Oxiderespiratory burst oxidase homolog d[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesStress PhysiologicalGeneticsPlants Interacting with Other Organismsglutathione reductase030304 developmental biologyPlant DiseasesArabidopsis ProteinsCell MembraneWild typeGlutathioneHydrogen Peroxidebiology.organism_classificationMolecular biologyPlant LeavesOxidative StresschemistryMutationglutathione-s-transferaseIsochorismate synthasebiology.proteinglutamate-cysteine ligaseReactive Oxygen Species010606 plant biology & botany
researchProduct

Gene regulation in parthenocarpic tomato fruit.

2009

Parthenocarpy is potentially a desirable trait for many commercially grown fruits if undesirable changes to structure, flavour, or nutrition can be avoided. Parthenocarpic transgenic tomato plants (cv MicroTom) were obtained by the regulation of genes for auxin synthesis (iaaM) or responsiveness (rolB) driven by DefH9 or the INNER NO OUTER (INO) promoter from Arabidopsis thaliana. Fruits at a breaker stage were analysed at a transcriptomic and metabolomic level using microarrays, real-time reverse transcription-polymerase chain reaction (RT-PCR) and a Pegasus III TOF (time of flight) mass spectrometer. Although differences were observed in the shape of fully ripe fruits, no clear correlatio…

0106 biological sciencesPhysiologyParthenogenesisPlant Biologyseedless fruitPlant SciencetomatoParthenocarpy01 natural sciencesSolanum lycopersicumGene Expression Regulation PlantGene expressionArabidopsis thalianaHormone metabolismPlant Proteins2. Zero hungerchemistry.chemical_classification0303 health sciencesbiologyfood and beveragesRipeningPlantsPlants Genetically ModifiedResearch PapersBiochemistryMetabolomeBiotechnologyCrop and Pasture ProductionINOPlant Biology & Botanyfruit ripeningGenetically Modified03 medical and health sciencesparthenocarpicAuxinBotanyGeneticsGenetically modified tomatoLycopersicon esculentum030304 developmental biologyNutritionfruit quality fruit ripening INO parthenocarpic seedless fruit tomato.Arabidopsis Proteinsfungifruit qualityPlantbiology.organism_classificationSeedless fruitchemistryGene Expression RegulationFruit010606 plant biology & botanyTranscription Factors
researchProduct

Distinct lytic vacuolar compartments are embedded inside the protein storage vacuole of dry and germinating Arabidopsis thaliana seeds.

2011

International audience; Plant cell vacuoles are diverse and dynamic structures. In particular, during seed germination, the protein storage vacuoles are rapidly replaced by a central lytic vacuole enabling rapid elongation of embryo cells. In this study, we investigate the dynamic remodeling of vacuolar compartments during Arabidopsis seed germination using immunocytochemistry with antibodies against tonoplast intrinsic protein (TIP) isoforms as well as proteins involved in nutrient mobilization and vacuolar acidification. Our results confirm the existence of a lytic compartment embedded in the protein storage vacuole of dry seeds, decorated by γ-TIP, the vacuolar proton pumping pyrophospha…

0106 biological sciencesPhysiologyProtein storage vacuoleProton-pumping pyrophosphataseArabidopsisPlant ScienceVacuoleUNIQUEMESH: Protein Isoforms01 natural sciencesPYROPHOSPHATASEArabidopsisProtein IsoformsMESH: ArabidopsisH+-ATPASETONOPLAST INTRINSIC PROTEINPLANT-CELLSCation Transport ProteinsIN-VIVOPlant Proteinschemistry.chemical_classification0303 health sciencesMESH: Plant ProteinsGeneral MedicineCell biologyProtein TransportVacuolar acidificationLytic cycleSeedsPREVACUOLAR COMPARTMENTMESH: DesiccationVacuolar Proton-Translocating ATPasesMESH: Protein TransportMESH: Vacuolar Proton-Translocating ATPasesGerminationMESH: Arabidopsis ProteinsMESH: GerminationBiologyAquaporinsMESH: Vacuoles03 medical and health sciencesMESH: AquaporinsMESH: Cation Transport ProteinsStorage protein[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyLytic vacuoleDesiccation030304 developmental biologySeedArabidopsis ProteinsCell Biologybiology.organism_classificationTRANSPORTchemistryMESH: SeedsVacuolesVacuoleMEMBRANEMOBILIZATION010606 plant biology & botany
researchProduct

RNA interference in Lepidoptera: an overview of successful and unsuccessful studies and implications for experimental design.

2011

International audience; Gene silencing through RNA interference (RNAi) has revolutionized the study of gene function, particularly in non-model insects. However, in Lepidoptera (moths and butterflies) RNAi has many times proven to be difficult to achieve. Most of the negative results have been anecdotal and the positive experiments have not been collected in such a way that they are possible to analyze. In this review, we have collected detailed data from more than 150 experiments including all to date published and many unpublished experiments. Despite a large variation in the data, trends that are found are that RNAi is particularly successful in the family Saturniidae and in genes involv…

0106 biological sciencesPhysiology[SDV]Life Sciences [q-bio]Tissue uptakeBioinformatics01 natural sciencesRNA interferenceRNA interferenceDatabases GeneticDelivery methodsCaenorhabditis elegansRegulation of gene expression0303 health sciencesIMMUNE-RESPONSESMANDUCA-SEXTALepidopteraRNA silencingSILKWORM BOMBYX-MORIResearch DesignInsect ProteinsRNA InterferenceMESSENGER-RNAHELICOVERPA-ARMIGERADOUBLE-STRANDED-RNAComputational biologyBiologyLepidoptera genitaliadsRNA properties03 medical and health sciencesBACILLUS-THURINGIENSISSMALL SILENCING RNASGene silencingAnimalsGene SilencingGene030304 developmental biologyRNA Double-StrandedMechanism (biology)fungiBiology and Life SciencesARMYWORM SPODOPTERA-FRUGIPERDAbiology.organism_classificationImmunity Innate010602 entomologyGene Expression RegulationInsect ScienceEpidermisCAENORHABDITIS-ELEGANSGene functionJournal of insect physiology
researchProduct

Interactions between dark septate endophytes, ectomycorrhizal fungi and root pathogens in vitro

2019

ABSTRACT Dark septate endophytes (DSEs) are widely distributed worldwide and can promote plant growth. Therefore, they are considered potentially important plant allies, especially in stressful environments. Previous studies have reported that DSEs cohabit roots with other microorganisms such as ectomycorrhizal (ECM), endophytic and pathogenic fungi/oomycetes. However, interactions between different DSE species have not yet been reported, and studies on the interactions between DSEs and other fungi are scarce. Using a simple and reproducible pairwise growth assay in vitro, we studied the synergistic/antagonistic interactions between eight DSEs, two ECM fungi and three root pathogens. Most o…

0106 biological sciencesPhytophthora citricolaectomycorrhizal fungiMicroorganismroot pathogenic fungiPhialophora mustea[SDV]Life Sciences [q-bio]Heterobasidion annosumBiological pest controlPhialocephala fortiniiContext (language use)FungusDark septate endophytePlant Roots01 natural sciencesMicrobiology03 medical and health sciencesCadophora spMycorrhizaePhialophoraBotanyEndophytesGeneticsSymbiosisMolecular Biology030304 developmental biology2. Zero hunger0303 health sciencesLeptodontidium spbiologyFungifood and beveragesDark septate endophyte15. Life on landbiology.organism_classificationPhenotype010606 plant biology & botany
researchProduct

Current view of nitric oxide-responsive genes in plants

2009

International audience; Significant efforts have been directed towards the identification of genes differentially regulated through nitric oxide (NO)-dependent processes. These efforts comprise the use of medium- and large-scale transcriptomic analyses including microarray and cDNA-amplification fragment length polymorphism (AFLP) approaches. Numerous putative NO-responsive genes have been identified in plant tissues and cell suspensions with transcript levels altered by artificially released NO, or endogenously produced. Comparative analysis of the data from such transcriptomic analyses in Arabidopsis reveals that a significant part of these genes encode proteins related to plant adaptive …

0106 biological sciencesPlant ScienceBiology01 natural sciencesNitric oxide synthase-like enzymeTranscriptomic analysisTranscriptome03 medical and health sciencesL-NAME[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyTranscription (biology)Complementary DNAArabidopsisGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyGeneTranscription factor030304 developmental biologyGenetics0303 health sciencesBiotic and abiotic stressesNitric oxide-responsive genesPromoterNitric oxideGeneral Medicinebiology.organism_classificationStress biotiqueDNA microarrayAgronomy and Crop Science010606 plant biology & botany
researchProduct

The first confirmed population of the globally endangered Pilularia minuta (Marsileaceae) in Sicily

2016

Based on a recent collection made by the authors, the presence of the endangered Pilularia minuta Durieu in Sicily (Italy) is confirmed. Critical review of relevant literature and herbarium specimens suggests that the only previous report for the island, made in 1887, can, fairly confidently, be considered to be the result of a misidentification. There is an urgent need to protect the wetland at Anguillara (near Calatafimi), where the species was found.

0106 biological sciencesPopulationEndangered speciesWetlandConservationPlant Science010603 evolutionary biology01 natural sciencesPilularia minutaPilularia minutaeducationEcology Evolution Behavior and Systematicseducation.field_of_studygeography.geographical_feature_categoryPteridophytebiologyEcologyMarsileaceaeEcologySettore BIO/02 - Botanica SistematicaForestrybiology.organism_classificationEcology Evolution Behavior and SystematicwetlandGeographyHerbariumMarsileaceaeSettore BIO/03 - Botanica Ambientale E Applicata010606 plant biology & botany
researchProduct

Viral fitness determines the magnitude of transcriptomic and epigenomic reprograming of defense responses in plants

2020

Although epigenetic factors may influence the expression of defense genes in plants, their role in antiviral responses and the impact of viral adaptation and evolution in shaping these interactions are still poorly explored. We used two isolates of turnip mosaic potyvirus with varying degrees of adaptation to Arabidopsis thaliana to address these issues. One of the isolates was experimentally evolved in the plant and presented increased load and virulence relative to the ancestral isolate. The magnitude of the transcriptomic responses was larger for the evolved isolate and indicated a role of innate immunity systems triggered by molecular patterns and effectors in the infection process. Sev…

0106 biological sciencesPotyvirusAdaptation BiologicalArabidopsisTurnip mosaic virus01 natural sciencesEpigenesis Genetic03 medical and health sciencesEpigenomeBiotic stressGeneticsPlant–virus interactionTurnip mosaic virusEpigeneticsMolecular BiologyGeneRNA-Directed DNA MethylationEcology Evolution Behavior and Systematics030304 developmental biologyEpigenomicsGenetics0303 health sciencesbiologyRNA-directed DNA methylationsystems biologyEpigenomevirus adaptationDNA Methylationbiology.organism_classificationBiological EvolutionRNA silencingExperimental evolutionHost-Pathogen InteractionsDNA methylationMethylomeGenetic FitnessTranscriptome010606 plant biology & botany
researchProduct

An early Ca2+ influx is a prerequisite to thaxtomin A-induced cell death in Arabidopsis thaliana cells

2008

International audience; The pathogenicity of various Streptomyces scabies isolates involved in potato scab disease was correlated with the production of thaxtomin A. Since calcium is known as an essential second messenger associated with pathogen-induced plant responses and cell death, it was investigated whether thaxtomin A could induce a Ca 2+ influx related to cell death and to other putative plant responses using Arabidopsis thaliana suspension cells, which is a convenient model to study plant–microbe interactions. A. thaliana cells were treated with micromolar concentrations of thaxto-min A. Cell death was quantified and ion flux variations were analysed from electrophysiological measu…

0106 biological sciencesProgrammed cell death[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyCellchemistry.chemical_element[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC]Plant ScienceBiologyCalcium01 natural sciences03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN][SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]medicineArabidopsis thaliana[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM][SDV.BDD.GAM]Life Sciences [q-bio]/Development Biology/Gametogenesis030304 developmental biology0303 health sciencesVoltage-dependent calcium channelfood and beverages[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology[SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular Networks [q-bio.MN]Streptomyces scabiesbiology.organism_classificationplant pathogenStreptomyces[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingcell deaththaxtomin A[CHIM.POLY]Chemical Sciences/Polymersmedicine.anatomical_structureBiochemistrychemistryion channelSecond messenger systemCalciumSignal transduction010606 plant biology & botanyJournal of Experimental Botany
researchProduct

Reticulon-like proteins in Arabidopsis thaliana: structural organization and ER localization

2007

International audience; Reticulons are proteins that have been found predominantly associated with the endoplasmic reticulum in yeast and mammalian cells. While their functions are still poorly understood, recent findings suggest that they participate in the shaping of the tubular endoplamic reticulum (ER). Although reticulon-like proteins have been identified in plants, very little is known about their cellular localization and functions. Here, we characterized the reticulon-like protein family of Arabidopsis thaliana. Three subfamilies can be distinguished on the basis of structural organization and sequence homology. We investigated the subcellular localization of two members of the larg…

0106 biological sciencesProtein familyMolecular Sequence DataBiophysicsArabidopsis[SDV.BC]Life Sciences [q-bio]/Cellular BiologyRTLNB01 natural sciencesBiochemistryPlant Epidermis03 medical and health sciencesProtein structureStructural BiologyArabidopsisGeneticsArabidopsis thalianaAmino Acid SequenceMolecular BiologyCellular localizationConserved SequencePhylogeny030304 developmental biology0303 health sciencesbiologySequence Homology Amino AcidArabidopsis ProteinsEndoplasmic reticulumENDOPLASMIC RETICULUMCHLOROPLASTARABIDOPSIS THALIANACell BiologySubcellular localizationbiology.organism_classificationRETICULONBiochemistryReticulonRETICULON-LIKE PROTEIN BSequence Alignment010606 plant biology & botany
researchProduct