Search results for "EAD"
showing 10 items of 5911 documents
CUSHAW2-GPU: Empowering Faster Gapped Short-Read Alignment Using GPU Computing
2014
We present CUSHAW2-GPU to accelerate the CUSHAW2 algorithm using compute unified device architecture (CUDA)-enabled GPUs. Two critical GPU computing techniques, namely intertask hybrid CPU-GPU parallelism and tile-based Smith-Waterman map backtracking using CUDA, are investigated to facilitate fast alignments. By aligning both simulated and real reads to the human genome, our aligner yields comparable or better performance compared to BWA-SW, Bowtie2, and GEM. Furthermore, CUSHAW2-GPU with a Tesla K20c GPU achieves significant speedups over the multithreaded CUSHAW2, BWA-SW, Bowtie2, and GEM on the 12 cores of a high-end CPU for both single-end and paired-end alignment.
Adaptive discontinuous evolution Galerkin method for dry atmospheric flow
2014
We present a new adaptive genuinely multidimensional method within the framework of the discontinuous Galerkin method. The discontinuous evolution Galerkin (DEG) method couples a discontinuous Galerkin formulation with approximate evolution operators. The latter are constructed using the bicharacteristics of multidimensional hyperbolic systems, such that all of the infinitely many directions of wave propagation are considered explicitly. In order to take into account multiscale phenomena that typically appear in atmospheric flows nonlinear fluxes are split into a linear part governing the acoustic and gravitational waves and a nonlinear part that models advection. Time integration is realiz…
A new styracosternan hadrosauroid (Dinosauria: Ornithischia) from the Early Cretaceous of Portell, Spain
2021
A new styracosternan ornithopod genus and species is described based on the right dentary of a single specimen from the Mirambell Formation (Early Cretaceous, early Barremian) at the locality of Portell, (Castellón, Spain).Portellsaurus sosbaynatigen. et sp. nov. is diagnosed by two autapomorphic features as well as a unique combination of characters. The autapomorphies include: the absence of a bulge along the ventral margin directly ventral to the base of the coronoid process and the presence of a deep oval cavity on the medial surface of the mandibular adductor fossa below the eleventh-twelfth tooth position. Phylogenetic analyses reveal that the new Iberian form is more closely related …
Dental disease and dietary isotopes of individuals from St Gertrude Church cemetery, Riga, Latvia.
2018
This research explores oral health indicators and stable carbon and nitrogen isotope data to explore diet, and differences in diet, between people buried in the four different contexts of the St Gertrude Church cemetery (15th– 17th centuries AD): the general cemetery, two mass graves, and a collective mass burial pit within the general cemetery. The main aim is to assess whether people buried in the mass graves were rural immigrants, or if they were more likely to be the victims of plague (or another epidemic) who lived in Riga and its suburbs. The data produced (from dental disease assessments and isotope analyses) were compared within, as well as between, the contexts. Most differences em…
Proposals for improvement of Annex I of Directive 92/43/ EEC: Central Italy
2021
The main purpose of the 92/43/EEC Habitats Directive is to contribute to the conservation of biodiversity, understood as habitat types and species of the flora and fauna of the European Union. To achieve this goal, natural and semi-natural biodiversity as a whole must be recognized and included in its annexes. As for the conservation of biotopes, named habitat types, Italy is unfortunately lacking as it the Annex I does not include important ecosystems that are typical of its territory, rare for biogeographical reasons or threatened. Therefore, the opportunity to identify a first list of significant habitats for central Italy is discussed here. For each of the new proposed types (new habita…
Tempo-controlled resistance training of the hip abductors and ankle dorsiflexors with light loads does not improve postural sway in older adults.
2022
The force steadiness capabilities of the hip abductors and ankle dorsiflexors can explain a significant amount of the variance in postural sway during four types of standing balance tests. Control over balance, as well as force steadiness, generally worsens with aging, although the latter can be improved with unique training interventions. The purpose of our study was to assess how tempo-controlled, light-load resistance training of the hip abductors and ankle dorsiflexors influences performance in clinical movement tests, postural sway, muscle strength, and force steadiness in older adults. Participants (n = 28, 70 +/- 7 years, 8 men) completed nine training sessions for either the hip abd…
Factors affecting peak impact force during soccer headers and implications for the mitigation of head injuries
2020
It has been documented that up to 22% of all soccer injuries are concussions. This is in part due to players purposely using their head to direct the ball during play. To provide a more complete understanding of head trauma in soccer athletes, this study characterized the effects of four soccer ball characteristics (size, inflation pressure, mass, velocity) on the resulting peak impact force as it relates to the potential for incurring neurophysiological changes. A total of six hundred trials were performed on size 4 and 5 soccer balls as well as a novel lightweight soccer ball. Impact force was measured with a force plate and ball velocity was determined using motion capture. These data we…
Mitochondrial DNA Portrait of Latvians: Towards the Understanding of the Genetic Structure of Baltic-Speaking Populations
2005
Summary Mitochondrial DNA (mtDNA) variation was investigated in a sample of 299 Latvians, a Baltic-speaking population from Eastern Europe. Sequencing of the first hypervariable segment (HVS-I) in combination with analysis of informative coding region markers revealed that the vast majority of observed mtDNAs belong to haplogroups (hgs) common to most European populations. Analysis of the spatial distribution of mtDNA haplotypes found in Latvians, as well as in Baltic-speaking populations in general, revealed that they share haplotypes with all neighbouring populations irrespective of their linguistic affiliation. Hence, the results of our mtDNA analysis show that the previously described s…
Cloning and characterization of the phenylalanyl-tRNA synthetase β subunit gene fromCandida albicans
1998
A Candida albicans expression library was constructed from RNA isolated from regenerating protoplasts. A 1.4-kb cDNA clone was used to isolate a genomic fragment. Sequence analysis revealed an open reading frame of 593 amino acids with an overall identity of 63.6% with the phenylalanyl-tRNA synthetase beta subunit (FRS1) of Saccharomyces cerevisiae. We named it CaFRS1. It is located in a single copy in chromosome R, SfiI fragment M. Its expression showed a decrease during the cell wall regeneration process in protoplasts of both yeast and mycelial cells of C. albicans, suggesting its requirement thereof in initial steps of the cell wall synthesis.
Service discovery protocols in D2D-enabled cellular networks: Reactive versus proactive
2014
Device-to-Device (D2D) communication, which allows access services offered by nearby devices bypassing the base station, has been regarded as an essential component of the emerging 5G mobile networks. Many advantages can be provided by this direct communication paradigm such as high data rate, traffic offloading, range extension, as well as proximity services and social networking. In such a context, service discovery approaches need to be investigated. In this paper, we propose two protocols for service discovery, namely, reactive (pull) discovery and proactive (push) discovery in infrastructure-coordinated D2D networks. The protocol overhead is calculated and numerical results are provide…