Search results for "EB"

showing 10 items of 15658 documents

VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy

2017

The possibility of integrating viral vectors to become a persistent part of the host genome makes them a crucial element of clinical gene therapy. However, viral integration has associated risks, such as the unintentional activation of oncogenes that can result in cancer. Therefore, the analysis of integration sites of retroviral vectors is a crucial step in developing safer vectors for therapeutic use. Here we present VISMapper, a vector integration site analysis web server, to analyze next-generation sequencing data for retroviral vector integration sites. VISMapper can be found at: http://vismapper.babelomics.org . Because it uses novel mapping algorithms VISMapper is remarkably faster t…

0301 basic medicineWeb serverVirus IntegrationGenetic enhancementGenetic VectorsContext (language use)Computational biologyBiologyGenoma humàlcsh:Computer applications to medicine. Medical informaticscomputer.software_genreBiochemistryGenome viewerViral vectorViral integrationUser-Computer Interface03 medical and health sciencesGene therapyStructural BiologySAFERViral insertionSequence mappingHumansUltra fastGens Mapatgelcsh:QH301-705.5Molecular BiologyGeneticsInternetBase SequenceApplied MathematicsHigh-Throughput Nucleotide SequencingGenetic Therapy3. Good healthComputer Science Applications030104 developmental biologylcsh:Biology (General)lcsh:R858-859.7Viral integrationDNA microarraycomputerSoftware
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Optimization of electrospraying conditions for the microencapsulation of probiotics and evaluation of their resistance during storage and in-vitro di…

2016

Electrospraying has recently emerged as a novel microencapsulation technique with potential for the protection of probiotics. However, research efforts are still needed to minimize the viability loss observed during the processing of sensitive strains, and to maximize productivity. The aim of the present work was the optimization of the electrospraying conditions for the microencapsulation of a model probiotic microorganism, Lactobacillus plantarum, within a whey protein concentrate matrix. In a pre-optimization step, the convenience of encapsulating fresh culture instead of freeze-dried bacteria was established. Additionally, a surface response methodology was used to study the effect of t…

0301 basic medicineWhey proteinmedicine.medical_treatmentMicroorganismProbioticlaw.invention03 medical and health sciencesProbiotic0404 agricultural biotechnologylawmedicineViability assayFood scienceElectrospraying030109 nutrition & dieteticsbiologyChemistryPrebiotic04 agricultural and veterinary sciencesIn vitro digestionbiology.organism_classification040401 food scienceWhey proteinSurface response methodologyL. plantarumEncapsulationLactobacillus plantarumFood Science
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Microbial Enzymes: Relevance for Winemaking

2017

Production of wine from grape juice is predominantly the result of complex enzymatic reactions. The primary bioconversion of grape sugar to ethanol and CO2 by the yeast Saccharomyces cerevisiae is catalyzed by cytosolic enzymes. In spontaneous must fermentations, also strains of Saccharomyces bayanus or interspecies hybrids may dominate, probably because of better adaptation to specific environmental conditions. In addition, various enzymes released into the must influence the final composition, color, and sensory properties of wines. These enzymes originate from the grape itself, from epiphytic fungi like Botrytis cinerea, and from yeasts and bacteria associated with vineyards and wine cel…

0301 basic medicineWinebiologyChemistryfungi030106 microbiologyDebaryomycesSaccharomyces bayanusfood and beveragesZygosaccharomycesRhodotorulabiology.organism_classificationHanseniasporaYeast03 medical and health sciences030104 developmental biologyFood scienceWinemaking
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Stability of stationary solutions in models of the Calvin cycle

2017

Abstract In this paper results are obtained concerning the number of positive stationary solutions in simple models of the Calvin cycle of photosynthesis and the stability of these solutions. It is proved that there are open sets of parameters in the model of Zhu et al. (2009) for which there exist two positive stationary solutions. There are never more than two isolated positive stationary solutions but under certain explicit special conditions on the parameters there is a whole continuum of positive stationary solutions. It is also shown that in the set of parameter values for which two isolated positive stationary solutions exist there is an open subset where one of the solutions is asym…

0301 basic medicineWork (thermodynamics)Applied Mathematics010102 general mathematicsGeneral EngineeringOpen setGeneral MedicineMathematical proof01 natural sciencesStability (probability)03 medical and health sciencesComputational Mathematics030104 developmental biologySimple (abstract algebra)Stability theoryApplied mathematicsContinuum (set theory)0101 mathematicsGeneral Economics Econometrics and FinanceAnalysisBifurcationMathematicsNonlinear Analysis: Real World Applications
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The most well kept secret, embryo culture media: a smart reveal from an expert.

2017

0301 basic medicineWorld Wide WebEmbryo Culture Techniques03 medical and health sciences030219 obstetrics & reproductive medicine030104 developmental biology0302 clinical medicineReproductive MedicineComputer scienceObstetrics and GynecologyEmbryo cultureEmbryo TransferCulture MediaFertility and sterility
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Indeno[1,2,3-cd]pyrene and picene mediate actions via estrogen receptor α signaling pathway in in vitro cell systems, altering gene expression.

2020

Currently, the environmental impact of ubiquitous plastic debris triggered quite some public attention. However, the global impact of microplastic on human health is by and large either unknown or neglected. By looking at the underlying biochemical mechanisms leading to the global health threat microplastic was discovered to carry persistent organic pollutants, such as polycyclic aromatic hydrocarbons (PAH), to marine life. The effect of microplastic-ingestion in the human body remains unfortunately somewhat elusive as of yet. For this reason, we screened for compounds binding to the human estrogen receptor α (ERα) and identified the PAH compounds indeno[1,2,3-cd]pyrene (Indpy) and picene (…

0301 basic medicineXBP1IER3Estrogen receptorGene ExpressionToxicologyReal-Time Polymerase Chain ReactionChrysenes03 medical and health sciences0302 clinical medicineGene expressionCEBPBHumansPharmacologyPyrenesCell growthChemistryHEK 293 cellsEstrogen Receptor alphaCell biologyMolecular Docking Simulation030104 developmental biologyGene Expression Regulation030220 oncology & carcinogenesisMCF-7 CellsSignal transductionSignal TransductionToxicology and applied pharmacology
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Mitigating anticipated effects of systematic errors supports sister-group relationship between Xenacoelomorpha and Ambulacraria.

2019

International audience; Xenoturbella and the acoelomorph worms (Xenacoelomorpha) are simple marine animals with controversial affinities. They have been placed as the sister group of all other bilaterian animals (Nephrozoa hypothesis), implying their simplicity is an ancient characteristic ]; alternatively, they have been linked to the complex Ambulacraria (echinoderms and hemichordates) in a clade called the Xenambulacraria , suggesting their simplicity evolved by reduction from a complex ancestor. The difficulty resolving this problem implies the phylogenetic signal supporting the correct solution is weak and affected by inadequate modeling, creating a misleading non-phylogenetic signal. …

0301 basic medicineXenoturbellaAmbulacrariamedia_common.quotation_subjectAcoelomorpha ; Ambulacraria ; Metazoa ; Nephrozoa ; Phylogenomics ; Phylogeny ; Systematic Error ; XenoturbellaNephrozoaContext (language use)phylogeny[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyGeneral Biochemistry Genetics and Molecular Biologysystematic error03 medical and health sciences0302 clinical medicineXenoturbellaAnimalsSimplicityAmbulacrariaChordatamedia_commonLong branch attractionbiologyMetazoa[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Acoelomorphaphylogenomicsbiology.organism_classificationBiological EvolutionInvertebratesXenacoelomorpha[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology030104 developmental biologySister groupEvolutionary biologyOutgroupGeneral Agricultural and Biological Sciences030217 neurology & neurosurgeryEchinodermata
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Bacterial community diversity harboured by interacting species

2016

International audience; All animals are infected by microbial partners that can be passengers or residents and influence many biological traits of their hosts. Even if important factors that structure the composition and abundance of microbial communities within and among host individuals have been recently described, such as diet, developmental stage or phylogeny, few studies have conducted cross-taxonomic comparisons, especially on host species related by trophic relationships. Here, we describe and compare the microbial communities associated with the cabbage root fly Delia radicum and its three major parasitoids: the two staphylinid beetles Aleochara bilineata and A. bipustulata and the…

0301 basic medicine[SDV]Life Sciences [q-bio]lcsh:MedicinespeciesArtificial Gene Amplification and ExtensionPathogenesisPathology and Laboratory MedicinephylogenycabbagegenusPolymerase Chain ReactiongeographyParasitoidAbundance (ecology)[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyMedicine and Health SciencesRickettsialcsh:ScienceTrophic levelMultidisciplinarybiologyEcologyMicrobiotabeetleGenomicsBiodiversityBacterial PathogensInsectsColeopterasymbiont[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologypyrosequencingMedical MicrobiologyHost-Pathogen Interactions[SDE]Environmental SciencesWolbachiaFrancePathogensmicrobial communityWolbachiaResearch ArticleArthropodaSpiroplasmaMollicutesSpiroplasmaMicrobial GenomicsResearch and Analysis MethodsMicrobiology03 medical and health sciencesPhylogeneticsGeneticsAnimals[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyMolecular Biology TechniquesMolecular BiologyMicrobial PathogensparasitoidBacteriaHost (biology)Dipteralcsh:RfungiOrganismsBiology and Life Sciencesbiology.organism_classificationInvertebratesHymenoptera030104 developmental biologylcsh:QMicrobiomeDelia radicum
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Culinary choices: A sociopsychological perspective based on the concept of distance to the object

2015

Culinary choices are a dynamic process that involves many considerations, including individual, contextual, cultural, and social factors. This study provides a better understanding of how culinary socialization along with food neophobia, culinary decisions and culinary habits, underlie culinary choices, measured by the concept of Distance to the Object (DO). This concept is useful in exploring the role of some psychosocial factors: knowledge (real and perceived), involvement (importance, personal identification, perceived ability), and level of practices (behaviors) associated with the social object under study, here, cooking. In this study, the DO concept measures the relationships of an i…

0301 basic medicine[SHS.SOCIO] Humanities and Social Sciences/Sociologymedia_common.quotation_subject[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutrition[SHS.PSY]Humanities and Social Sciences/PsychologyComputer-assisted web interviewing[SHS]Humanities and Social Sciences[SHS.PSY] Humanities and Social Sciences/Psychology03 medical and health sciences[ SHS.PSY ] Humanities and Social Sciences/PsychologyOriginalityculinary choicesdistance to objectmedicinemedia_common030109 nutrition & dieteticsNutrition and Dietetics[SHS.SOCIO]Humanities and Social Sciences/Sociologycookingculinary habitsTaste (sociology)SocializationPerspective (graphical)Neophobia[ SHS.SOCIO ] Humanities and Social Sciences/Sociologyfood neophobiamedicine.diseaseObject (philosophy)[SDV.AEN] Life Sciences [q-bio]/Food and NutritionPsychologyPsychosocialSocial psychology[SDV.AEN]Life Sciences [q-bio]/Food and NutritionFood Science
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2016

In the perinatal as well as the adult CNS, the subventricular zone (SVZ) of the forebrain is the largest and most active source of neural stem cells (NSCs) that generates neurons and oligodendrocytes (OLs), the myelin forming cells of the CNS. Recent advances in the field are beginning to shed light regarding SVZ heterogeneity, with the existence of spatially segregated microdomains that are intrinsically biased to generate phenotypically distinct neuronal populations. Although most research has focused on this regionalization in the context of neurogenesis, newer findings underline that this also applies for the genesis of OLs under the control of specific patterning molecules. In this min…

0301 basic medicineanimal diseasesGeneral NeuroscienceNeurogenesisWnt signaling pathwaySubventricular zoneContext (language use)BiologyOligodendrocyteNeural stem cell03 medical and health sciencesMyelin030104 developmental biologymedicine.anatomical_structurenervous systemForebrainmedicineNeuroscienceFrontiers in Neuroscience
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