Search results for "Effective"
showing 10 items of 1371 documents
Harvest‐induced evolution and effective population size
2016
Much has been written about fishery-induced evolution (FIE) in exploited species, but relatively little attention has been paid to the consequences for one of the most important parameters in evolutionary biology-effective population size (N-e). We use a combination of simulations of Atlantic cod populations experiencing harvest, artificial manipulation of cod life tables, and analytical methods to explore how adding harvest to natural mortality affects N-e, census size (N), and the ratio N-e/N. We show that harvest-mediated reductions in N-e are due entirely to reductions in recruitment, because increasing adult mortality actually increases the N-e/N ratio. This means that proportional red…
Assessing global range expansion in a cryptic species complex: insights from the red seaweed genus Asparagopsis (Florideophyceae)
2017
The mitochondrial genetic diversity, distribution and invasive potential of multiple cryptic operational taxonomic units (OTUs) of the red invasive seaweed Asparagopsis were assessed by studying introduced Mediterranean and Hawaiian populations. Invasive behavior of each Asparagopsis OTU was inferred from phylogeographic reconstructions, past historical demographic dynamics, recent range expansion assessments and future distributional predictions obtained from demographic models. Genealogical networks resolved Asparagopsis gametophytes and tetrasporophytes into four A. taxiformis and one A. armata cryptic OTUs. Falkenbergia isolates of A. taxiformis L3 were recovered for the first time in t…
Narrow genetic base in forest restoration with holm oak (Quercus ilex L.) in Sicily
2007
International audience; In order to empirically assess the effect of actual seed sampling strategy on genetic diversity of holm oak (Quercus ilex) forestations in Sicily, we have analysed the genetic composition of two seedling lots (nursery stock and plantation) and their known natural seed origin stand by means of six nuclear microsatellite loci. Significant reduction in genetic diversity and significant difference in genetic composition of the seedling lots compared to the seed origin stand were detected. The female and the total effective number of parents were quantified by means of maternity assignment of seedlings and temporal changes in allele frequencies. Extremely low effective ma…
Marine protected areas overall success evaluation (MOSE): A novel integrated framework for assessing management performance and social-ecological ben…
2020
International audience; Characterized by interlinked social, economic, and ecological dynamics, Marine Protected Areas (MPAs) are a management tool for achieving sustainability goals in social-ecological systems. The recent increase in their establishment worldwide, fostered by international policies, highlights the need for comprehensive and integrated assessment frameworks able to address the evaluation of their social-ecological effectiveness and management performance, which is of fundamental importance for their adaptive management and decision making processes. Although several indicators and methodologies exist to assess MPAs ecological or social performances, no comprehensive assess…
Causes of mortality in depleted populations of Atlantic cod estimated from multi-event modelling of mark–recapture and recovery data
2017
Knowledge on mortality causes is key for an effective management of animal populations and can help to restore depleted fish stocks. Here we investigated the mortality dynamics of coastal Atlantic cod (Gadus morhua) in Skagerrak, southern Norway, by analyzing local mark–recapture and recovery data collected from 2005 to 2013 (N = 9360 fish, mean length = 41 cm, range = 16–93 cm). By applying multi-event models to the data, we could link field observations to multiple “dead states” and estimate the proportion of deaths associated with different fishing gears while controlling for unobserved mortality and detection errors. Deaths due to hand lines and fixed gear types were dominant compared …
The cost-effectiveness of using raptor nest sites to identify areas with high species richness of other taxa
2016
Abstract Given the limited resources available for conservation, it is important that the areas to preserve are selected in a cost effective manner. However, the cost effectiveness of the surrogate species strategy (the use of information on one or more species to identify areas of value for other species for which there is no, or more limited, available information) has seldom been evaluated. In this study, we investigate the opportunity cost of setting aside breeding sites of two forest raptor species (the surrogate species) by evaluating their individual and combined contribution to preserve diversity of polypores (wood-decaying fungi) and birds against the contributions of previously es…
Fossorial but widespread: the phylogeography of the common spadefoot toad (Pelobates fuscus), and the role of the Po Valley as a major source of gene…
2007
International audience; Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species' range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCP…
Common Bottlenose Dolphin Protection and Sustainable Boating: Species Distribution Modeling for Effective Coastal Planning
2020
Indicators for preserving marine biodiversity include knowledge of how the spatial distribution and critical habitats of species overlap with human activities and impacts. Such indicators are key tools for marine spatial planning, a process that identifies and resolves conflicts between human uses and the conservation of marine environments. The common bottlenose dolphin in the Mediterranean Sea is considered a vulnerable species by the IUCN Red List and a priority species of the EU Habitat Directive. Here, we estimated spatio-temporal patterns of the species occurrence in the area around one Marine Protected Area (MPA) and two Sites of Community Importance (SCI) of the North western Sardin…
A population genomics analysis of the native Irish Galway sheep breed.
2019
SUMMARYThe Galway sheep population is the only native Irish sheep breed and represents an important livestock genetic resource, which is currently categorised as “at-risk”. In the present study, comparative population genomics analyses of Galway sheep and other sheep populations of European origin were used to investigate the microevolution and recent genetic history of the breed. These analyses support the hypothesis that British Leicester sheep were used in the formation of the Galway breed and suggest more recent gene flow from the Suffolk sheep breed. When compared to conventional and endangered breeds, the Galway breed was intermediate in effective population size, genomic inbreeding a…
Una visión integral del cáncer (III). Evaluación de nuevos biomarcadores y posibilidades de intervención
2020
We propose a comprehensive approach to oncological disease, based on a systemic consideration of biology, health and disease. Our two previous review articles focused on tumour microenvironment and the discovery of new biomarkers; here we discuss the practical application of these principles to pathology, through the identification, evaluation and quantitative analysis of new prognostic and predictive factors (Immunoscore, TIME). We also consider the clinical use of promising, better tolerated treatments, such as immunotherapy. The integrative pathologist now has access to the latest improved oncology stratification tools designed to identify effective treatment strategies, based on the nat…