Search results for "Electrophoresi"

showing 10 items of 1009 documents

Impact of crop species on bacterial community structure during anaerobic co-digestion of crops and cow manure

2008

The bacterial communities in three continuously stirred tank reactors co-digesting cow manure with grass silage, oat straw, and sugar beet tops, respectively, were investigated by 16S rRNA gene-based fingerprints and clone libraries. The analyses revealed both clearly distinct and similar phylotypes in the bacterial communities between the reactors. The major groups represented in the three reactors were Clostridia, unclassified Bacteria, and Bacteroidetes. Phylotypes affiliated with Bacilli or Deltaproteobacteria were unique to the sugar beet and straw reactor, respectively. Unclassified Bacteria dominated in sugar beet reactor while in the straw and grass reactor Clostridia was the domina…

Crops AgriculturalEnvironmental EngineeringSilageBioengineeringcomplex mixturesClostridiaBioreactorsRNA Ribosomal 16SAnimalsAnaerobiosisWaste Management and DisposalPhylogenyElectrophoresis Agar GelBacteriaBase SequencebiologyRenewable Energy Sustainability and the Environmentfungitechnology industry and agriculturefood and beveragesBacteroidetesGeneral MedicineStrawequipment and suppliesbiology.organism_classificationManureClone CellsManureAnaerobic digestionAgronomyCattleSugar beetCow dungPolymorphism Restriction Fragment LengthBioresource Technology
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Ultrastructure, fractionation and biochemical analysis of Cryptosporidium parvum sporozoites.

1999

Abstract Sporozoites of the apicomplexan parasite Cryptosporidium parvum were subjected to cell disruption and subcellular fractionation using a sucrose density step gradient. With this procedure, highly enriched preparations of the parasite membrane, the micronemes, dense granules and amylopectin granules were produced. No separate fraction containing rhoptries was obtained, however this organelle was found in defined fractions of the gradient, still associated with the apical tip of the sporozoites. Using negative staining, the internal structure of the micronemes was revealed by transmission electron microscopy. Micronemes and dense granules showed characteristic protein compositions by …

Cryptosporidium parvumOrganellesRhoptryProtozoan ProteinsCattle DiseasesCryptosporidiosisBiologybiology.organism_classificationCell FractionationNegative stainApicomplexaMicronemeMicroscopy ElectronInfectious DiseasesCryptosporidium parvumBiochemistryOrganelleUltrastructureCentrifugation Density GradientAnimalsParasitologyCattleElectrophoresis Polyacrylamide GelCell fractionationInternational journal for parasitology
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Cyclodextrins in capillary electrophoresis: Recent developments and new trends

2014

Despite the fact that extensive research in the field of separations by capillary electrophoresis (CE) has been carried out and many reviews have been published in the last years, a specific review on the use and future potential of cyclodextrins (CDs) in CE is not available. This review focuses the attention in the CD-CE topic over the January 2013-February 2014 period (not covered by previous more general CE-reviews). Recent contributions (reviews and research articles) including practical uses (e.g. solute-CD binding constant estimation and further potentials; 19% of publications), developments and applications (mainly chiral and achiral analysis; 38 and 24% of publications, respectively…

CyclodextrinsCapillary electrophoresisChromatographyChemistryOrganic ChemistryAnimalsElectrophoresis CapillaryHumansStereoisomerismAdsorptionGeneral MedicineBiochemistryAnalytical ChemistryJournal of Chromatography A
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Fast-multivariate optimization of chiral separations in capillary electrophoresis: Anticipative strategies

2014

Abstract The design of experiments (DOE) is a good option for rationally limiting the number of experiments required to achieve the enantioresolution (Rs) of a chiral compound in capillary electrophoresis. In some cases, the modeled Rs after DOE analysis can be unsatisfactory, maybe because the range of the explored factors (DOE domain) was not the adequate. In these cases, anticipative strategies can be an alternative to the repetition of the process (e.g. a new DOE), to save time and money. In this work, multiple linear regression (MLR)-steepest ascent and a new anticipative strategy based on a multiple response-partial least squares model (called PLS2-prediction) are examined as post-DOE…

CyclodextrinsChromatographyChemistrybusiness.industryDesign of experimentsOrganic ChemistryProcess (computing)Electrophoresis CapillaryStereoisomerismGeneral MedicineHydrogen-Ion ConcentrationBiochemistryLeast squaresAnalytical ChemistryRange (mathematics)SoftwareCapillary electrophoresisPartial least squares regressionLinear regressionbusinessJournal of Chromatography A
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Deciliation: A stressful event for Paracentrotus lividus embryos.

1998

In this report, by using mono- and two-dimensional electrophoretic analysis, we demonstrate that deciliation on sea urchin embryos induces a stress response. Deciliation indeed causes not only the activation of ciliary subroutine, but also a transient decrease of bulk protein synthesis. This decrease is in agreement with our previous results on heat shock response in sea urchin, although deciliation does not induce the expression of the same main hsp set. We were able to characterize one main deciliation-stress protein of 40 kDa whose expression is transiently induced by deciliation and whose localisation is likely to be nuclear.

CytoplasmEmbryo NonmammalianBiophysicsBiochemistryParacentrotus lividusFight-or-flight responseMethionineStress Physiologicalbiology.animalProtein biosynthesisAnimalsRegenerationElectrophoresis Gel Two-DimensionalCiliaHeat shockMolecular BiologySea urchinCell NucleusSaline Solution HypertonicbiologyProteinsEmbryoCell BiologyGastrulaSea urchin embryobiology.organism_classificationMolecular biologyCell biologyProtein BiosynthesisSea UrchinsElectrophoresis Polyacrylamide GelBiochemical and biophysical research communications
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Analysis of cytochrome C oxidase subunits III and IV expression in developing rat brain

2004

Abstract Cytochrome c oxidase (COX) complex is built up with both nucleus- and mitochondrion-encoded subunits. Biogenesis and assembly of the complex thus requires fine cross-talk between the two compartments. In order to shed light on the regulation of nuclear–mitochondrial interactions, we studied the expression of COXIII (mitochondrion-encoded) and COXIV (nucleus-encoded) in adult rat tissues and rat developing brain. We found that the levels of COXIV protein and mRNA are not linearly related, thus suggesting a post-transcriptional mode of regulation. In agreement with this observation, we report the presence of a protein that specifically binds to the 3′-untranslated region of COXIV mRN…

CytoplasmRNA-binding proteinProtein subunitBlotting WesternCOX IVRNA-binding proteinMitochondrionBiologyGene Expression Regulation EnzymologicElectron Transport Complex IVAnimalsCytochrome c oxidaseElectrophoresis Gel Two-DimensionalCOX III.RNA MessengerRNA Processing Post-TranscriptionalMessenger RNAGeneral NeuroscienceBrainProteinsRNABlotting NorthernMitochondriaRatsProtein TransportCytosolnucleus-mitochondrion cross-talkBiochemistryCytoplasmbiology.proteinNeuroscience
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Ferric-reductase activities in Vibrio vulnificus biotypes 1 and 2.

1999

In this paper, the ferric-reductase activities of Vibrio vulnificus were investigated. This species comprises two biotypes pathogenic for humans and eels that are able to express different mechanisms for iron acquisition. All strains of both biotypes used in this study were able to reduce ferric citrate, irrespective of the iron levels in the growth medium. Some variation in the degree of reduction was observed among the strains, with the highest values corresponding to one acapsulated environmental strain of biotype 1. When cell fractions were tested, only those from periplasm and cytoplasm showed reductase activity whereas no activity was detected in membranes. Low temperatures inhibited …

CytoplasmTime FactorsFMN ReductaseIronVibrio vulnificusReductaseMicrobiologyFerric CompoundsMicrobiologychemistry.chemical_compoundBacterial ProteinsVibrionaceaeGeneticsAnimalsHumansNADH NADPH OxidoreductasesMolecular BiologyVibrioGrowth mediumEelsbiologyStrain (chemistry)Cell MembranePeriplasmic spacebiology.organism_classificationCulture MediachemistryBiochemistryCytoplasmPeriplasmbacteriaElectrophoresis Polyacrylamide GelBacteriaFEMS microbiology letters
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Replication origins and pause sites in sea urchin mitochondrial DNA

1992

We have used a combination of one- and two-dimensional agarose gel electrophoresis, and solution hybridization to strand-specific probes, to map the replication origin of sea urchin mitochondrial DNA and to investigate the structure of replication intermediates. These assays are consistent with replication initiating unidirectionally from the D-loop region by D-loop expansion, as in vertebrates. A prominent site of initiation of lagging-strand synthesis lies at, or near to, the boundary between the genes for ATPase 6 and COIII, which is also close to a pause site for leading-strand synthesis. These findings suggest a role for pause sites in the regulation of mitochondrial transcription and …

DNA ReplicationMitochondrial DNAMacromolecular SubstancesRestriction MappingEukaryotic DNA replicationBiologyOrigin of replicationPre-replication complexDNA MitochondrialDNA RibosomalGeneral Biochemistry Genetics and Molecular BiologyElectron Transport Complex IVRNA TransferControl of chromosome duplicationAnimalsElectrophoresis Gel Two-DimensionalGeneral Environmental ScienceElectrophoresis Agar GelGeneral Immunology and MicrobiologyTer proteinChromosome MappingNADH DehydrogenaseGeneral MedicineMolecular biologyCell biologyRNA RibosomalSea UrchinsNucleic Acid ConformationOrigin recognition complexSolution hybridizationGeneral Agricultural and Biological SciencesProceedings of the Royal Society of London. Series B: Biological Sciences
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Differences between cysteine and homocysteine in the induction of deoxyribose degradation and DNA damage.

2001

The effect of two naturally occurring thiols, such as cysteine and homocysteine, has been examined for their ability to induce deoxyribose degradation and DNA damage. Copper(II) ions have been added to incubation mixtures and oxygen consumption measurements have been performed in order to correlate the observed damaging effects with the rate of metal catalyzed thiol oxidation. Ascorbic acid plus copper has been used as a positive control of deoxyribose and DNA oxidation due to reactive oxygen species. Cysteine or homocysteine in the presence of copper ions induce the degradation of deoxyribose and the yield of 8-hydroxy-2'-deoxyguanosine (8-OHdG), although important differences are observed…

DNA damageAscorbic AcidThymus GlandBiochemistrySuperoxide dismutasechemistry.chemical_compoundOxygen ConsumptionPhysiology (medical)DeoxyguanosineAnimalsCysteineHomocysteineElectrophoresis Agar GelbiologyDeoxyriboseSuperoxide DismutaseThiourea8-Hydroxy-2'-deoxyguanosineDeoxyguanosineDNA oxidationAscorbic acidCatalasechemistryDeoxyriboseBiochemistry8-Hydroxy-2'-DeoxyguanosineSpectrophotometrybiology.proteinCattleReactive Oxygen SpeciesOxidation-ReductionCopperCysteineDNA DamageFree radical biologymedicine
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Comparison of DNase, DNA-polymerase and RNA-polymerase activities present in the DNA-bindung proteins of normal human dermis, epidermis, horny layer …

1978

DNA-binding proteins (DBP) of normal human dermis, epidermis, horny layer and psoriatic scales represent a tissue-specific group of mostly nuclear nonhistone proteins. To analyse their function, the different DBP fractions were examined concerning the presence of DNase, DNA-polymerase and RNA-polymerase activities. DBP of normal epidermis and horny layer contain four different DNases. One DNase of both DBP fractions is active only at pH 5.0. Three DNases of epidermal DBP are active at a pH-range from 5.0--8.5, while the corresponding DNases of horny layer-DBP are most active at pH 7.4. Probably these DNases have changed their pH-optimum during keratinisation. DBP of psoriatic scales include…

DNA polymeraseDNA-Directed DNA PolymeraseDermatologychemistry.chemical_compoundNon-histone proteinDermisRNA polymerasemedicineHumansPsoriasisSkinchemistry.chemical_classificationThymidine monophosphateDeoxyribonucleasesEpidermis (botany)biologyIsoelectric focusingProteinsDNA-Directed RNA PolymerasesGeneral MedicineElectrophoresis DiscMolecular biologyEnzyme Activationmedicine.anatomical_structureEnzymechemistrybiology.proteinEpidermisIsoelectric FocusingProtein Bindingcirculatory and respiratory physiologyArchives of Dermatological Research
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