Search results for "Epsin"

showing 10 items of 218 documents

Fluorine Scan of Inhibitors of the Cysteine Protease Human Cathepsin L: Dipolar and Quadrupolar Effects in the π-Stacking of Fluorinated Phenyl Rings…

2016

The π-stacking of fluorinated benzene rings on protein backbone amide groups was investigated, using a dual approach comprising enzyme-ligand binding studies complemented by high-level quantum chemical calculations. In the experimental study, the phenyl substituent of triazine nitrile inhibitors of human cathepsin L (hCatL), which stacks onto the peptide amide bond Gly67-Gly68 at the entrance of the S3 pocket, was systematically fluorinated, and differences in inhibitory potency were measured in a fluorimetric assay. Binding affinity is influenced by lipophilicity (clog P), the dipole and quadrupole moments of the fluorinated rings, but also by additional interactions of the introduced fluo…

HalogenationNitrileStereochemistryCathepsin LStackingSubstituentchemistry.chemical_elementPeptideCysteine Proteinase InhibitorsMolecular Dynamics SimulationLigands010402 general chemistry01 natural sciencesBiochemistrychemistry.chemical_compoundAmideDrug DiscoveryHumansPeptide bondFluorometryGeneral Pharmacology Toxicology and PharmaceuticsTriazinePharmacologychemistry.chemical_classificationBinding SitesTriazines010405 organic chemistryOrganic ChemistryFluorineAmidesProtein Structure Tertiary0104 chemical sciencesKineticschemistryFluorineQuantum TheoryMolecular MedicineHydrophobic and Hydrophilic InteractionsChemMedChem
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Stefin A and cathepsin B and L circulating serum levels in patients with malignant or non-malignant liver diseases: A preliminary report

1995

Experimental and clinical studies have recently shown a significant correlation between increased activity levels of lysosomal proteinases Cathepsin B, L in tumor tissues and malignant progression. On the basis of these findings we have undertaken some preliminary studies to evaluate the clinical impact of these enzymes and their intracellular inhibitor Stefin A in patients with malignant and non malignant liver diseases. The serum levels of Cathepsin B, L and Stefin A resulted significantly increased (mean 7 folds) in patients with liver diseases as compared to healthy subjects . these findings suggest that Cathepsin B, Cathepsin L, and Stefin A serum levels may be potentially useful as pr…

Hepatocellular carcinomaCathepsin LLysosomal proteinaseStefin ACathepsin BLiver cirrhosi
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Autophagy, cathepsin L transport, and acidification in cultured rat fibroblasts.

1992

The mechanisms of enzyme delivery to and acidification of early autophagic vacuoles in cultured fibroblasts were elucidated by cryoimmunoelectron microscopic methods. The cation-independent mannose-6-phosphate receptor (MPR) was used as a marker of the pre-lysosomal compartment, and cathepsin L and an acidotropic amine (3-(2,4-dinitroanilino)-3'-amino-N-methyl-dipropylamine (DAMP), a cytochemical probe for low-pH organelles) as markers of both pre-lysosomal and lysosomal compartments. In addition, cationized ferritin was used as an endocytic marker. In ultrastructural double labeling experiments, the bulk of all the antigens was found in vesicles containing tightly packed membrane material…

HistologyCathepsin LEndocytic cycleFluorescent Antibody TechniqueReceptors Cell SurfaceVacuoleReceptor IGF Type 2Cathepsin LEndopeptidasesOrganelleAutophagyAnimalsMicroscopy ImmunoelectronCells CulturedCathepsinMannosephosphatesbiologyVesicleBiological TransportFibroblastsHydrogen-Ion ConcentrationCathepsinsRatsCell biologyFerritinCysteine EndopeptidasesDinitrobenzenesBiochemistryCytoplasmbiology.proteinAnatomyJournal of Histochemistry & Cytochemistry
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Histochemical and electron microscopic analysis of spiculogenesis in the demosponge Suberites domuncula.

2006

The skeleton of demosponges is built of spicules consisting of biosilica. Using the primmorph system from Suberites domuncula, we demonstrate that silicatein, the biosilica-synthesizing enzyme, and silicase, the catabolic enzyme, are colocalized at the surface of growing spicules as well as in the axial filament located in the axial canal. It is assumed that these two enzymes are responsible for the deposition of biosilica. In search of additional potential structural molecules that might guide the mineralization process during spiculogenesis to species-specific spicules, electron microscopic studies with antibodies against galectin and silicatein were performed. These studies showed that …

HistologybiologyHistocytochemistryGalectinsMolecular Sequence DataFlagellumbiology.organism_classificationSilicon DioxideMineralization (biology)CathepsinsMicrobiologySilica depositionSuberites domunculaMicroscopy ElectronDemospongeSponge spiculeBiophysicsAnimalsAmino Acid SequenceCollagenAnatomySuberitesElectron microscopicGalectinThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society
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New Cathepsin Inhibitors to Explore the Fluorophilic Properties of the S 2 Pocket of Cathepsin B: Design, Synthesis, and Biological Evaluation

2011

5 páginas, 1 figura, 2 tablas -- PAGS nros. 5256-5260

Hydrocarbons FluorinatedStereochemistryStereoisomerismhydrolasesstereoselectivityCatalysisCathepsin BCathepsin BNitrilesinhibitorsCombinatorial Chemistry TechniquesHumansMoleculefluorinated ligandsBiological evaluationCathepsinMolecular StructureCombinatorial Chemistry TechniquesligandsChemistryOrganic ChemistryStereoisomerismDipeptidesGeneral Chemistryfluorinated fluorinatedDesign synthesisDrug DesignpeptidesStereoselectivityChemistry – A European Journal
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Cathepsin-B Induced Controlled Release from Peptide-Capped Mesoporous Silica Nanoparticles

2014

New capped silica mesoporous nanoparticles for intracellular controlled cargo release within cathepsin B expressing cells are described. Nanometric mesoporous MCM-41 supports loaded with safranin O (S1-P) or doxorubicin (S2-P) containing a molecular gate based on a cathepsin B target peptidic sequence were synthesized. Solids were designed to show "zero delivery" and to display cargo release in the presence of cathepsin B enzyme, which selectively hydrolyzed in vitro the capping peptide sequence. Controlled delivery in HeLa, MEFs WT, and MEFs lacking cathepsin B cell lines were also tested. Release of safranin O and doxorubicin in these cells took place when cathepsin B was active or presen…

INGENIERIA DE LA CONSTRUCCIONCell Survivalgated mesoporous materialsPeptideAntineoplastic AgentsCatalysisCathepsin BCell LineCathepsin BHeLaQUIMICA ORGANICAHumansCytotoxicityPeptide sequencechemistry.chemical_classificationDrug CarriersbiologyOrganic ChemistryQUIMICA INORGANICAGeneral ChemistryMesoporous silicabiology.organism_classificationSilicon DioxideControlled releasechemistryBiochemistryDoxorubicinBiophysicspeptidesnanoparticlescontrolled releasePorosityIntracellularHeLa Cells
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Inhibition of the Cysteine Protease Human Cathepsin L by Triazine Nitriles: Amide⋅⋅⋅Heteroarene π-Stacking Interactions and Chalcogen Bonding in the …

2016

We report an extensive "heteroarene scan" of triazine nitrile ligands of the cysteine protease human cathepsin L (hCatL) to investigate π-stacking on the peptide amide bond Gly67-Gly68 at the entrance of the S3 pocket. This heteroarene⋅⋅⋅peptide bond stacking was supported by a co-crystal structure of an imidazopyridine ligand with hCatL. Inhibitory constants (Ki ) are strongly influenced by the diverse nature of the heterocycles and specific interactions with the local environment of the S3 pocket. Binding affinities vary by three orders of magnitude. All heteroaromatic ligands feature enhanced binding by comparison with hydrocarbon analogues. Predicted energetic contributions from the ori…

ImidazopyridineNitrileStereochemistryCathepsin LPeptideMolecular Dynamics Simulation010402 general chemistryCrystallography X-RayLigands01 natural sciencesBiochemistrychemistry.chemical_compoundAmideDrug DiscoveryHydrolaseNitrilesPeptide bondHumansGeneral Pharmacology Toxicology and PharmaceuticsTriazinePharmacologychemistry.chemical_classificationBinding Sites010405 organic chemistryChemistryLigandTriazinesOrganic ChemistryAmides0104 chemical sciencesProtein Structure TertiaryMolecular MedicineChalcogensQuantum TheoryProtein BindingChemMedChem
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Bacterial sensors based on biosilica immobilization for label-free OWLS detection

2013

In the last years, a new group of enzymes, the so-called silicateins, have been identified and characterized, which form the axial filaments of the spicules of the siliceous sponges, consisting of not only amorphous silica among others. These enzymes are able to catalyze the polycondensation and deposition of silica at mild conditions. Silicateins can be expressed in Escherichia coli. The recombinant proteins are expressed on the surface of the cell wall and are able to catalyze the formation of a polysilicate net around the bacterial cells providing the possibility for further attachment to the surface of SiO2 containing sensor chips. With this mild immobilization process it is now possibl…

InsecticidesBioengineeringBiosensing Techniquesmedicine.disease_causeBacterial cell structurelaw.inventionCell wallCarbofuranchemistry.chemical_compoundlawEscherichia colimedicineHydrogen peroxideMolecular BiologyEscherichia colichemistry.chemical_classificationbiologyChloramphenicolPenicillin GHydrogen PeroxideGeneral MedicineOxidantsSilicon Dioxidebiology.organism_classificationCathepsinsAnti-Bacterial AgentsOxidative StressChloramphenicolEnzymechemistryBiochemistryRecombinant DNABacteriaBiotechnologymedicine.drugNew Biotechnology
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Cathepsin D in the malignant progression of neoplastic diseases

1992

Recent studies suggest that aspartic proteinase Cathepsin D may be implicated in the process of tumor invasion and metastasis. In fact several in vitro observations showed that this proteinase may facilitate the spread of neoplastic cells through different mechanisms related to its proteolytic activity by acting at different levels of the metastatic cascade. Cathepsin D may promote tumor cell proliferation by acting as an autocrine mitogen through the activation of latent forms of growth factors or by interacting with growth factor receptors. The enzyme was also shown to be able to degrade in vitro extracellular matrix and to activate latent precursors forms of other proteinases involved in…

InvasionMetastasiCathepsin DPepstatin
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Collagenolytic proteinases in keratoconus.

2006

To study the proteolytic phenomena contributing to the pathogenesis of keratoconus, corneal enzymes with potential to cleave fibrillar collagen were studied.Immunohistochemical labeling was undertaken of conventional and novel mammalian collagenases (MMP-1, -2, -8, -13, and -14) of the matrix metalloproteinase (MMP) family and other collagenolytic proteinases of the serine (human trypsin-2) and cysteine (cathepsin K) endoproteinase families. The results were analyzed using a semiquantitative scoring system.Labeling of MMP-8 was moderate in healthy controls, but weak in keratoconus. Moderate MMP-2 and weak MMP-14 expressions were similar in controls and keratoconus. MMP-1 was slightly overex…

KeratoconusPathologymedicine.medical_specialtygenetic structuresCathepsin KMatrix metalloproteinaseKeratoconusPathogenesisCorneaImmunoenzyme TechniquesCorneamedicineCathepsin KHumansTrypsinCollagenaseschemistry.chemical_classificationmedicine.diseaseCathepsinseye diseasesMatrix MetalloproteinasesOphthalmologyEnzymemedicine.anatomical_structurechemistryCollagenaseTrypsinogenImmunohistochemistrysense organsKeratoplasty Penetratingmedicine.drugCornea
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