Search results for "FUNGAL"

showing 10 items of 1116 documents

Transcription of genes in the biosynthetic pathway for fumonisin mycotoxins is epigenetically and differentially regulated in the fungal maize pathog…

2012

ABSTRACT When the fungal pathogen Gibberella moniliformis (anamorph, Fusarium verticillioides ) colonizes maize and maize-based products, it produces class B fumonisin (FB) mycotoxins, which are a significant threat to human and animal health. FB biosynthetic enzymes and accessory proteins are encoded by a set of clustered and cotranscribed genes collectively named FUM, whose molecular regulation is beginning to be unraveled by researchers. FB accumulation correlates with the amount of transcripts from the key FUM genes, FUM1 , FUM21 , and FUM8 . In fungi in general, gene expression is often partially controlled at the chromatin level in secondary metabolism; when this is the case, the deac…

DISRUPTIONTranscription GeneticFUM21[SDV]Life Sciences [q-bio]DIVERSITYPROTEINFusarium verticillioidesmaizeSECONDARY METABOLISMgene clusterEpigenesis GeneticHistonesFUM8FusariumGene Expression Regulation FungalASPERGILLUSPromoter Regions Genetic2. Zero hungerGenetics0303 health sciencesHistone deacetylase inhibitorhistone acetylationAcetylationArticlesGeneral MedicineChromatinChromatinGENOMEHistoneMultigene Family[SDE]Environmental SciencesTrichostatin AEpigenetics; Fusarium verticillioides; fmonisin synthesismedicine.drugCONIDIATIONChromatin Immunoprecipitationmedicine.drug_classGenes FungalChIPBiologyGFPZea maysMicrobiologyFumonisinsChromatin remodeling03 medical and health sciencesmedicineEpigeneticsMolecular Biology030304 developmental biologyepigenetics030306 microbiologyCLUSTERFumonisins; epigenetics; Fusarium verticillioides; maize; histone acetylation; histone deacetylases; ChIP; Trichostatin A; FUM1; FUM21; FUM8; GFP; gene clusterMycotoxinsChromatin Assembly and DisassemblyFUM1Histone Deacetylase InhibitorsTrichostatin AAcetylationbiology.proteinChromatin immunoprecipitationhistone deacetylases
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Preservation of genetic and regulatory robustness in ancient gene duplicates of Saccharomyces cerevisiae

2014

[EN] Biological systems remain robust against certain genetic and environmental challenges. Robustness allows the exploration of ecological adaptations. It is unclear what factors contribute to increasing robustness. Gene duplication has been considered to increase genetic robustness through functional redundancy, accelerating the evolution of novel functions. However, recent findings have questioned the link between duplication and robustness. In particular, it remains elusive whether ancient duplicates still bear potential for innovation through preserved redundancy and robustness. Here we have investigated this question by evolving the yeast Saccharomyces cerevisiae for 2200 generations …

DNA Mutational AnalysisGenes FungalSaccharomyces cerevisiaeSaccharomyces cerevisiaeBiologyPolymorphism Single NucleotideGenome03 medical and health sciences0302 clinical medicineINDEL MutationStress PhysiologicalGene DuplicationGene duplicationDNA Mutational AnalysisGeneticsBiologyGeneGenetics (clinical)030304 developmental biologyGenetics0303 health sciencesModels GeneticResearchFungal geneticsRobustness (evolution)biology.organism_classificationAdaptation PhysiologicalPhenotypeEvolutionary biologyMutationChromosomes FungalDirected Molecular EvolutionGenome FungalAlgorithms030217 neurology & neurosurgeryGenome Research
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Transformation of Aspergillus parasiticus using autonomously replicating plasmids from Aspergillus nidulans.

1994

A genetic transformation system for the aflatoxin-producing fungus Aspergillus parasiticus using two autonomously replicating plasmids from A. nidulans (ARp1 and pDHG25) is reported. Transformation frequencies using the plasmid pDHG25 were from 5 x 10(2) to 2.5 x 10(4) transformants per 10(6) viable protoplasts and microgram DNA. The stability of the plasmids in the transformants was also studied. This transformation system offers a new opportunity to clone genes related to aflatoxin production using appropriate aflatoxin-defective mutants.

DNA ReplicationArginine BAutonomously replicating sequenceMitosisLaboratorium voor ErfelijkheidsleerMicrobiologyAspergillus parasiticusAspergillus nidulansMicrobiologyGenetic transformationchemistry.chemical_compoundPlasmidTransformation GeneticAutonomous replicationAspergillus nidulansGeneticsDNA FungalMolecular BiologyGeneGeneticsAspergillus nidulans autonomous replicating plasmidbiologyProtoplastsfood and beveragesProtoplastbiology.organism_classificationAspergillus parasiticusTransformation (genetics)AspergilluschemistryLaboratory of GeneticsDNAPlasmidsFEMS microbiology letters
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Selecting Microbial Strains from Pine Tree Resin: Biotechnological Applications from a Terpene World

2014

Resin is a chemical and physical defensive barrier secreted by many plants, especially coniferous trees, with insecticidal and antimicrobial properties. The degradation of terpenes, the main components accounting for the toxicity of resin, is highly relevant for a vast range of biotechnological processes, including bioremediation. In the present work, we used a resin-based selective medium in order to study the resin-tolerant microbial communities associated with the galls formed by the moth Retinia resinella; as well as resin from Pinus sylvestris forests, one of the largest ecosystems on Earth and a yet-unexplored source of terpene-degrading microorganisms. The taxonomic and functional di…

DNA BacterialAntifungal AgentsApplied MicrobiologyMicroorganismlcsh:MedicineMothsBiologyMicrobiologyTerpeneEnvironmental BiotechnologyBioremediationPhylogeneticsMicrobial PhysiologyPlant TumorsPseudomonasBotanyGeneticsRNA Ribosomal 18SAnimalsEcosystemlcsh:SciencePhylogenyMicrobial MetabolismMultidisciplinaryTerpeneslcsh:RPseudomonasFungitechnology industry and agricultureFungal geneticsBiology and Life SciencesGenomicsSequence Analysis DNAPinusbiology.organism_classificationAntimicrobiallcsh:QTranscriptomeBioremediationResins PlantResearch ArticleBiotechnologyPLoS ONE
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Impact of biocide treatments on the bacterial communities of the Lascaux Cave.

2009

The Lascaux Cave contains a remarkable set of paintings from the Upper Palaeolithic. Shortly after discovery in 1940, the cave was modified for public viewing and, in 2001, was invaded by a Fusarium solani species complex. Benzalkonium chloride was used from 2001 to 2004 to eliminate the fungal outbreak. In this study, we carried out a sampling in most of the cave halls and galleries. Sequence analysis and isolation methods detected that the most abundant genera of bacteria were Ralstonia and Pseudomonas. We suggest that, as a result of years of benzalkonium chloride treatments, the indigenous microbial community has been replaced by microbial populations selected by biocide application.

DNA BacterialBiocideGeologic SedimentsLegionellaRalstonia03 medical and health sciencesBenzalkonium chlorideBENZALKONIUM CHLORIDERalstoniaCaveLASCAUX CAVEPseudomonasBotanymedicineEscherichia coliAlcaligenesDNA FungalEcology Evolution Behavior and Systematics030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesgeographygeography.geographical_feature_categoryBenzalkonium chloride . Ralstonia spp. . Pseudomonas spp. . Lascaux Cavebiology030306 microbiologyEcologyFungal geneticsFungiOutbreakGeneral Medicinebiology.organism_classificationIsolation (microbiology)[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyhumanitiesMicrobial population biologyPaintingsFrance[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyRALSTONIA SPP.Benzalkonium Compoundsmedicine.drugDisinfectantsDie Naturwissenschaften
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Heterotrophic microorganisms in deteriorated medieval wall paintings in southern Italian churches

2008

The Campania region in southern Italy is noted for its large number of churches that harbour invaluable frescoes, dated from the beginnings of the 4th up to the 13th century. The wall paintings represent an integral part of the monuments, and their deterioration constitutes a potentially significant loss for the world's cultural heritage. Heterotrophic microorganisms such as bacteria and mould can grow on the surface of paintings that contain a wide range of organic and inorganic constituents, and provide different ecological. niches that are exploited by a large variety of microbial. species. We isolated and identified the heterotrophic microorganisms found in the biodegraded medieval wall…

DNA BacterialIdentificationMedieval wall paintingMicroorganismMolecular Sequence DataBacillus cereusHeterotrophic microorganismDNA RibosomalMicrobiologyPaenibacillusGenusRNA Ribosomal 16SBotanyWall paintingDeteriorationDNA FungalPhylogenyBacillus (shape)BacteriabiologyActinomyceteBacillus pumilusFungiHeterotrophic ProcessesAlternariabiology.organism_classification16S ribosomal RNAHistory MedievalhumanitiesBiodeteriorationItalyPaintingsSettore AGR/16 - Microbiologia AgrariaMicrobiological Research
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Peri-implant parameters in head and neck reconstruction: influence of extraoral skin or intraoral mucosa.

2009

Objective: This study is designed to assess dental implants supporting overdentures in edentulous patients with operated head and neck malignancies using parameters to detect peri-implant disease. Material and methods: Thirty-four implants supporting overdentures in 34 oral cancer patients were examined. Clinical parameters [plaque index, probing depth, bleeding on probing (BOP), origin of peri-implant soft tissue, and amount of irradiation] were recorded, and microbiological identification of periodontal pathogens was carried out by DNA–DNA hybridization. To identify yeast species, the samples were cultivated on Sabouraud agar plates and subsequently identified by API 20C AUX plates. An im…

DNA BacterialMaleRadiographyBleeding on probingDentistryPilot ProjectsSabouraud agarPeriodontal pathogenchemistry.chemical_compoundmedicineHumansDNA FungalAgedCandidaDental ImplantsUnivariate analysisAnalysis of VarianceChi-Square Distributionbusiness.industryDental prosthesisDental Implantation EndosseousMouth MucosaSoft tissueSkin TransplantationDenture OverlaychemistryHead and Neck NeoplasmsFemaleImplantDental Prosthesis Implant-SupportedOral Surgerymedicine.symptomCranial IrradiationbusinessClinical oral implants research
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Effect of natamycin on the enumeration, genetic structure and composition of bacterial community isolated from soils and soybean rhizosphere

2004

Natamycin is commonly used to control fungal growth on agar media used for bacterial enumeration or strain isolation. However, there is no conclusive report on the possible effect of this antibiotic on bacterial growth or on the diversity of the recovered soil bacteria. Therefore, the possible effects of natamycin on the numbers of bacteria isolated at 12 degrees C from three different soils and soybean rhizosphere soil were investigated using natamycin concentrations ranging from 0 to 200 mg l(-1). Our results demonstrate that natamycin concentrations, which inhibit the growth of fungi on the media, have a small but significant inhibitory effect on the number of bacterial colony forming un…

DNA BacterialMicrobiology (medical)Antifungal Agentsfood.ingredientNatamycinRibosomal Intergenic Spacer analysisColony Count MicrobialBacterial growthBiologyPlant RootsMicrobiologyMicrobiologyBacterial genetics03 medical and health sciencesNatamycinfoodRNA Ribosomal 16SDNA Ribosomal SpacermedicineAgar[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyMolecular BiologySoil MicrobiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPrincipal Component Analysis0303 health sciencesRhizosphereBacteria030306 microbiologyGenetic VariationDNA Restriction Enzymesbiology.organism_classificationDNA Fingerprinting[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologySoybeansSoil microbiologyBacteriamedicine.drugJournal of Microbiological Methods
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Characterization of Bacterial and Fungal Soil Communities by Automated Ribosomal Intergenic Spacer Analysis Fingerprints: Biological and Methodologic…

2001

ABSTRACT Automated rRNA intergenic spacer analysis (ARISA) was used to characterise bacterial (B-ARISA) and fungal (F-ARISA) communities from different soil types. The 16S-23S intergenic spacer region from the bacterial rRNA operon was amplified from total soil community DNA for B-ARISA. Similarly, the two internal transcribed spacers and the 5.8S rRNA gene (ITS1-5.8S-ITS2) from the fungal rRNA operon were amplified from total soil community DNA for F-ARISA. Universal fluorescence-labeled primers were used for the PCRs, and fragments of between 200 and 1,200 bp were resolved on denaturing polyacrylamide gels by use of an automated sequencer with laser detection. Methodological (DNA extracti…

DNA BacterialRibosomal Intergenic Spacer analysisBiologyPolymerase Chain ReactionApplied Microbiology and Biotechnology03 medical and health sciencesIntergenic regionRNA Ribosomal 16SDNA Ribosomal SpacerMethodsDNA FungalComputingMilieux_MISCELLANEOUSEcosystemSoil Microbiology030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environmentGenetics[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology0303 health sciencesBacteriaEcology030306 microbiologyFungiReproducibility of ResultsGenes rRNASpacer DNABIOLOGIE MOLECULAIRERibosomal RNADNA FingerprintingDNA extraction[SDV.EE] Life Sciences [q-bio]/Ecology environmentRNA Ribosomal 23SDNA profilingRRNA Operon[SDE.BE]Environmental Sciences/Biodiversity and EcologySoil microbiologyFood ScienceBiotechnologyApplied and Environmental Microbiology
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Identification of the mstE Gene Encoding a Glucose-inducible, Low Affinity Glucose Transporter in Aspergillus nidulans

2006

The mstE gene encoding a low affinity glucose transporter active during the germination of Aspergillus nidulans conidia on glucose medium has been identified. mstE expression also occurs in hyphae, is induced in the presence of other repressing carbon sources besides glucose, and is dependent on the function of the transcriptional repressor CreA. The expression of MstE and its subcellular distribution have been studied using a MstE-sGFP fusion protein. Concordant with data on mstE expression, MstE-sGFP is synthesized in the presence of repressing carbon sources, and fluorescence at the periphery of conidia and hyphae is consistent with MstE location in the plasma membrane. Deletion of mstE …

DNA ComplementaryDatabases FactualMonosaccharide Transport ProteinsRecombinant Fusion ProteinsGlucose uptakeGenes FungalGreen Fluorescent ProteinsMolecular Sequence DataHyphaeRepressorBiochemistryAspergillus nidulansSubstrate SpecificityFungal ProteinsCell membraneAspergillus nidulansGene Expression Regulation FungalmedicineAmino Acid SequenceMolecular BiologyGenePhylogenyExpressed Sequence TagsFungal proteinbiologyCell MembranefungiGlucose transporterCell BiologySpores FungalBlotting Northernbiology.organism_classificationFusion proteinRepressor ProteinsKineticsGlucosemedicine.anatomical_structureMicroscopy FluorescenceBiochemistryGene DeletionJournal of Biological Chemistry
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