Search results for "Fish"

showing 10 items of 3164 documents

Isolation By Distance (IBD) signals in the deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) (Decapoda, Panaeidae) in the Mediterranean S…

2013

Abstract The identification of boundaries of genetic demes is one of the major goals for fishery management, and few Mediterranean commercial species have not been studied from a genetic point of view yet. The deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) is one of the most important components of commercial landings in Mediterranean, its fishery aspects have received much attention, regrettably without any concern for the genetic architecture of its populations. The population structure in the central and eastern Mediterranean Sea (captures from six Italian and two Greek landings) has been analysed on the basis of surveys carried out with mitochondrial and AFLP markers. Dat…

Genetic MarkersMediterranean climateSettore BIO/05 - ZoologiaAquatic ScienceOceanographyDNA MitochondrialPolymerase Chain ReactionRose shrimpMediterranean BasinMediterranean seaPenaeidaeMediterranean SeaAnimalsAmplified Fragment Length Polymorphism AnalysisPhylogenyIsolation by distancebiologyDecapodaEcologyGenetic VariationSequence Analysis DNAGeneral Medicinebiology.organism_classificationDNA FingerprintingPollutionFisheryParapenaeus longirostrisFisheries managementParapenaeus longirostris Isolation By Distance AFLP mtDNAMarine Environmental Research
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Kudoa trifolia sp. n. ? molecular phylogeny suggests a new spore morphology and unusual tissue location for a well-known genus

2006

A new species of myxozoan, Kudoa trifolia sp. n., was found in various organs of the golden grey mullet, Liza aurata (Risso), and the thinlip mullet, L. ramada (Risso), from the western Mediterranean. Spores developed in subspherical plasmodia of 0.28-1 mm diameter within connective tissue, predominantly in the spleen, the outer wall of the gall bladder and the gut, the mesenteries and occasionally also in the gills. The spores of K. trifolia differ from the commonly known shape of Kudoa by considerable enlargement of one of the four valve cells, thus forming a 'spore body', which contains the major part of the binucleate sporoplasm. Scanning electron microscopy of the spores revealed the p…

Genetic SpeciationVeterinary (miscellaneous)Molecular Sequence DataSpores ProtozoanAquatic ScienceFish DiseasesGenusBotanyMediterranean SeaAnimalsSeawaterMesenteriesProtozoan Infections AnimalPhylogenyAppendageMyxozoaSporoplasmbiologyfungiEukaryotaDNA Protozoanbiology.organism_classificationSmegmamorphaSporeMicroscopy ElectronKudoaGolden grey mulletJournal of Fish Diseases
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FISH mapping of 18S-28S and 5S ribosomal DNA, (GATA)n and (TTAGGG)n telomeric repeats in the periwinkle Melarhaphe neritoides (Prosobranchia, Gastrop…

2001

Spermatocyte chromosomes of Melarhaphe neritoides (Mollusca, Prosobranchia, Caenogastropoda) were studied using fluorescent in situ hybridization (FISH) with four repetitive DNA probes (18S rDNA, 5S rDNA, (TTAGGG)n and (GATA)n). Single-colour FISH consistently mapped one chromosome pair per spread using either 18S or 5S rDNA as probes. The telomeric sequence (TTAGGG)n hybridized with termini of all chromosomes whereas the (GATA)n probe did not label any areas. Simultaneous 18S-5S rDNA and 18S-(TTAGGG)n FISH demonstrated that repeated units of the three multicopy families are closely associated on the same chromosome pair.

GeneticsCaenogastropodabiologyProsobranchiaRNA Ribosomal 5SChromosome MappingZoologyTelomerebiology.organism_classificationDNA RibosomalMolluscaMelarhaphe neritoidesRNA Ribosomal 28SGastropodaRNA Ribosomal 18SGeneticsAnimalsFish <Actinopterygii>Ribosomal DNAIn Situ Hybridization FluorescenceGenetics (clinical)Repetitive Sequences Nucleic AcidHeredity
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Conventional karyotype, nucleolar organizer regions and genome size in five Mediterranean species of Syngnathidae (Pisces, Syngnathiformes)

1998

Conventional karyotypes, NOR-bearing chromosomes by means of silver impregnation and genome size were investigated in five Mediterranean species in three genera of the Syngnathidae. A karyotype of 48 subtelocentric-acrocentric chromosomes was found in the seahorse Hippocampus hippocampus (FN=48) while a diploid value of 44 occurred in H. guttulatus (2 sm-m+42 a; FN=46) and the pipefish Syngnathus abaster (44 a; FN=44) and S. typhle (44 a; FN=44). The pipefish Nerophis ophidion, possessing a diploid chromosomal set of 58 made up of 50 meta-submetacentric and eight subteloacrocentric elements (FN=108) and a genome size three to four times larger than those known to date, differs cytogenetical…

GeneticsChromosomeHippocampus hippocampusKaryotypeBiologyAquatic ScienceNucleolus organizationbiology.organism_classificationPipefishSilver stained chromosomeEvolutionary biologyMediterranean SeaCytogeneticPloidyNucleolus organizer regionSyngnathidaeGenome sizeEcology Evolution Behavior and Systematics
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Amplified fragment length polymorphism (AFLP) and biochemical typing of Photobacterium damselae subsp. damselae.

2002

Aims: The aim of the present study was to characterize subspecifically Photobacterium damselae subsp. damselae strains isolated from cultured Sparus aurata and Dicentrarchus labrax by means of phenotypic and molecular typing techniques (amplified fragment length polymorphism, AFLP). Methods and Results: Seventy-one strains of P. damselae subsp. damselae were isolated from 38 cultured fishes at different fish farms located on the Mediterranean coast near Valencia, Spain. Most fish studied were asymptomatic and some were recovered during infectious outbreaks. Phenotypic characterization revealed a considerable degree of variability within the subspecies, including some characters, such as pro…

GeneticsDNA BacterialPhotobacteriumDendrogramUPGMAGeneral MedicinePhenotypic traitAquacultureBiologySubspeciesPhotobacteriumbiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyBacterial Typing TechniquesPerciformesFish DiseasesPhotobacterium damselaePhenotypeAnimalsAmplified fragment length polymorphismTypingGram-Negative Bacterial InfectionsPolymorphism Restriction Fragment LengthBiotechnologyJournal of applied microbiology
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Conserved synteny of mammalian imprinted genes in chicken, frog, and fish genomes

2006

Conservation of synteny of mammalian imprinted genes between chicken and human suggested that highly conserved gene clusters were selected long before these genes were recruited for genomic imprinting in mammals. Here we have applied in silico mapping of orthologous genes in pipid frog, zebrafish, spotted green and Japanese pufferfish to show considerable conservation of synteny in lower vertebrates. More than 400 million years ago in a common ancestor of teleost fish and tetrapods, ‘preimprinted’ chromosome regions homologous to human 6q25, 7q21, 7q32, 11p15, and 15q11→q12 already contained most present-day mammalian imprinted genes. Interestingly, some imprinted gene orthologues which are…

GeneticsGenomeBiologySyntenyGenomeChromosomesEvolution MolecularConserved SyntenyMultigene FamilyVertebratesGeneticsAnimalsHumansFish <Actinopterygii>Genomic imprintingMolecular BiologyGeneGenetics (clinical)SyntenyCytogenetic and Genome Research
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Phylogeny and life cycle of the zoonotic pathogen Vibrio vulnificus

2020

Vibrio vulnificus is a zoonotic pathogen able to cause diseases in humans and fish that occasionally result in sepsis and death. Most reviews about this pathogen (including those related to its ecology) are clearly biased towards its role as a human pathogen, emphasizing its relationship with oysters as its main reservoir, the role of the known virulence factors as well as the clinic and the epidemiology of the human disease. This review tries to give to the reader a wider vision of the biology of this pathogen covering aspects related to its phylogeny and evolution and filling the gaps in our understanding of the general strategies that V. vulnificus uses to survive outside and inside its …

GeneticsLife Cycle Stages0303 health sciences030306 microbiologyEcology (disciplines)VirulenceHuman pathogenINFECTIOUS PROCESSVibrio vulnificusBiologybiology.organism_classificationMicrobiologyFish Diseases03 medical and health sciencesPhylogeneticsVibrio InfectionsAnimalsHumansVibrio vulnificusZoonotic pathogenPathogenPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyEnvironmental Microbiology
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Prisoner's dilemma in an RNA virus

1999

The evolution of competitive interactions among viruses1 was studied in the RNA phage φ6 at high and low multiplicities of infection (that is, at high and low ratios of infecting phage to host cells). At high multiplicities, many phage infect and reproduce in the same host cell, whereas at low multiplicities the viruses reproduce mainly as clones. An unexpected result of this study1 was that phage grown at high rates of co-infection increased in fitness initially, but then evolved lowered fitness. Here we show that the fitness of the high-multiplicity phage relative to their ancestors generates a pay-off matrix conforming to the prisoner's dilemma strategy of game theory2,3. In this strateg…

GeneticsMultidisciplinarybiologyvirusesmedia_common.quotation_subjectRNARNA virusPrisoner's dilemmaVirus Replicationbiology.organism_classificationBiological EvolutionModels BiologicalVirusCystovirusBacteriophage phi 6BacteriophageGame TheoryMutationMicrobial cooperationSelfishnessmedia_commonNature
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The Increase in Maternal Expression ofaxin1andaxin2Contribute to the Zebrafish MutantIchabodVentralized Phenotype

2015

β-catenin is a central effector of the Wnt pathway and one of the players in Ca+-dependent cell-cell adhesion. While many wnts are present and expressed in vertebrates, only one β-catenin exists in the majority of the organisms. One intriguing exception is zebrafish that carries two genes for β-catenin. The maternal recessive mutation ichabod presents very low levels of β-catenin2 that in turn affects dorsal axis formation, suggesting that β-catenin1 is incapable to compensate for β-catenin2 loss and raising the question of whether these two β-catenins may have differential roles during early axis specification. Here we identify a specific antibody that can discriminate selectively for β-ca…

GeneticsMutationbiologyWnt signaling pathwayEmbryoCell Biologymedicine.disease_causebiology.organism_classificationBiochemistryPhenotypeCell biologymedicineAXIN2Axis specificationMolecular BiologyZebrafishCellular localizationJournal of Cellular Biochemistry
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Transgenic tools for proteomic analysis of ciliary transport

2015

Vision begins as photons are captured by photoreceptor cilia and light is converted into electrical signals that are then sent to the brain. As the photoreceptor cilium is not able to make its own proteins, all polypeptides needed for converting photons into electrical signals are synthetized in the cell body. How these molecules move from the cell body to cilia is still unclear. Opsin is one of the best-characterized transmembrane proteins. Our goal is to understand the mechanism of opsin transport into photoreceptor cilia. In this project, we use a combination of genetic and proteomic approaches in the zebrafish model. As the first step, we are constructing a transgenic line that expresse…

GeneticsOpsingenetic structuresbiologyCiliumTransgeneCre recombinaseCell Biologybiology.organism_classificationeye diseasesTransmembrane proteinOpsin transportGreen fluorescent proteinCell biologyPoster Presentationsense organsZebrafishCilia
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