Search results for "Folate"

showing 10 items of 110 documents

Sulphonamide Antifolates Inhibiting Thymidylate Synthase. Synthesis, Enzyme Inhibition and Cytotoxicity

1993

Synthesis and biological evaluation are described of seven new analogues (3-9) of two potent thymidylate synthase inhibitors, 10-propargyl-5,8-dideazafolate (1) and its 2-methyl-2-deamino congener ICI 198583 (2). While the new compunds 3 and 4 were analogues of 1 and 2, respectively, containing a p-aminobenzenesulfonyl residue in place of the p-aminobenzoic acid residue, the remaining 5 new compounds were analogues of 4 with the L-glutamic acid residue replaced by glycine (5), L-valine (6), L-alanine (7), L-phenylglycine (8) or L-norvaline (9). The new analogues were tested as inhibitors of thymidylate synthases isolated from tumour (Ehrlich carcinoma), parasite (Hymenolepis diminuta) and n…

StereochemistryBiologyHymenolepis diminutabiology.organism_classificationThymidylate synthaseResidue (chemistry)chemistry.chemical_compoundchemistryThymidylate synthase inhibitorBiochemistryAntifolatebiology.proteinStructure–activity relationshipCytotoxicitySulfamide
researchProduct

Increased dynamic effects in a catalytically compromised variant of Escherichia coli dihydrofolate reductase

2013

Isotopic substitution (15N, 13C, 2H) of a catalytically compromised variant of Escherichia coli dihydrofolate reductase, EcDHFR-N23PP/S148A, has been used to investigate the effect of these mutations on catalysis. The reduction of the rate constant of the chemical step in the EcDHFR-N23PP/S148A catalyzed reaction is essentially a consequence of an increase of the quasi-classical free energy barrier and to a minor extent of an increased number of recrossing trajectories on the transition state dividing surface. Since the variant enzyme is less well set up to catalyze the reaction, a higher degree of active site reorganization is needed to reach the TS. Although millisecond active site motion…

StereochemistryCoupled motionsKnockoutHydride transferProtein dynamicsChemical stepmedicine.disease_causeTemperature-dependenceBiochemistryCatalysisArticleCatalysisEnzyme catalysisColloid and Surface ChemistryReaction rate constantDihydrofolate reductasemedicineEscherichia coliQDEscherichia colichemistry.chemical_classificationbiologyChemistryProtein dynamicsActive siteEnzyme catalysisGeneral ChemistryTetrahydrofolate DehydrogenaseEnzymeDehydrogenasebiology.proteinBiocatalysisConformational motions
researchProduct

Synthetic strategy for preparation of a folate corrole DOTA heterobimetallic Cu–Gd complex as a potential bimodal contrast agent in medical imaging

2015

Abstract An efficient sequential route to synthesize heterobimetallic complexes is reported herein. A folate, Cu corrole, Gd DOTA complex that addresses the requirements of a potential contrast agent (CA) for bimodal imaging (e.g., MRI/PET) is reported. The over-expression of the folate receptor in a variety of malignant tumors, along with its limited expression in healthy tissues, makes this an attractive tumor-specific molecular target. Synthesis of a bimetallic ligand potentially targeting the folate receptor, was easily achieved in only a few steps. Interestingly, preliminary studies showed that the relaxivity of the folic heterobimetallic derivative was higher in comparison to a clinic…

StereochemistryGadoliniumMRI contrast agentOrganic Chemistrychemistry.chemical_elementLigand (biochemistry)BiochemistryCombinatorial chemistryImaging agentchemistry.chemical_compoundchemistryIn vivoFolate receptorDrug DiscoveryDOTACorroleTetrahedron Letters
researchProduct

Are there dynamical effects in enzyme catalysis? Some thoughts concerning the enzymatic chemical step.

2015

Highlights • The possible role of enzymatic reaction dynamical effects is examined. • Solution reactions usefully inform the issue of dynamical effects in enzymes. • Division into regions containing and away from the transition state is important. • Motions in passage to/from the transition state need not lead to dynamical effects. • Transition State Theory is usually a reasonable description of enzyme kinetics.

StereochemistryProtein ConformationBiophysicsBiochemistryModels BiologicalVibrationArticleEnzyme catalysisDiffusionTransition state theoryTransition State TheoryEscherichia coli[CHIM]Chemical SciencesStatistical physicsMolecular BiologyQuantumNuclear motionChemistryQuantitative Biology::Molecular Networksdigestive oral and skin physiologyEnzyme catalysisEnzymesEnzyme ActivationKineticsTetrahydrofolate DehydrogenaseDynamical effectsBiocatalysisQuantum TheoryTetrahydrofolate dehydrogenaseProtonsArchives of biochemistry and biophysics
researchProduct

2013

The folate receptor (FR) is a well-established target for tumor imaging and therapy. To date, only a few 18 F-folate conjugates via 18 F-prosthetic group labeling for positron emission tomography (PET) imaging have been developed. To some extent, they all lack the optimal balance between efficient radiochemistry and favorable in vivo characteristics. A new clickable olate precursor was synthesized by regioselective coupling of folic acid to 11-azido-3,6,9-trioxaundecan-1-amine at the γ-position of the glutamic acid residue. The non-radioactive reference compound was synthesized via copper-catalyzed azide-alkyne cycloaddition of 3-(2-(2-(2-fluoroethoxy)ethoxy)ethoxy)prop-1-yne and γ-(11-azid…

Stereochemistrybusiness.industryRadiosynthesisGlutamic acidIn vivoFolate receptorLipophilicityAlkoxy groupClick chemistryMedicineRadiology Nuclear Medicine and imagingbusinessNuclear medicineEx vivoEJNMMI Research
researchProduct

Quantifying the limits of transition state theory in enzymatic catalysis

2017

Significance Transition state theory (TST) is the most popular theory to calculate the rates of enzymatic reactions. However, in some cases TST could fail due to the violation of the nonrecrossing hypothesis at the transition state. In the present work we show that even for one of the most controversial enzymatic reactions—the hydride transfer catalyzed by dihydrofolate reductase—the error associated to TST represents only a minor correction to the reaction rate. Moreover, this error is actually larger for the reaction in solution than in the enzymatic active site. Based on this finding and on previous studies we propose an “enzymatic shielding” hypothesis which encompasses various aspects …

Surface (mathematics)enzymatic catalysisDegrees of freedom (statistics)Molecular Dynamics Simulation010402 general chemistry01 natural sciencesEnzyme catalysisReaction coordinateReaction rateTransition state theoryMolecular dynamicsdihydrofolate reductasetransmission coefficientComputational chemistry0103 physical sciencesHumansdynamic effectsStatistical physicsIonsMultidisciplinary010304 chemical physicsChemistryState (functional analysis)Biological Sciencesbacterial infections and mycoses0104 chemical sciencesChemistryBiophysics and Computational BiologyKineticsTetrahydrofolate Dehydrogenasetransition state theoryPhysical SciencesBiocatalysisProceedings of the National Academy of Sciences
researchProduct

Adequate vitamin B12 and folate status of Norwegian vegans and vegetarians

2022

AbstractPlant-based diets may increase the risk of vitamin B12 deficiency due to limited intake of animal-source foods, while dietary folate increases when adhering to plant-based diets. In this cross-sectional study, we evaluated the B12 and folate status of Norwegian vegans and vegetarians using dietary B12 intake, B12 and folic acid supplement use, and biomarkers (serum B12 (B12), plasma total homocysteine (tHcy), plasma methylmalonic acid (MMA) and serum folate). Vegans (n 115) and vegetarians (n 90) completed a 24-h dietary recall and a FFQ and provided a non-fasting blood sample. cB12, a combined indicator for evaluation of B12 status, was calculated. B12 status was adequate in both v…

VegansFolateand promotion of well-beingNutrition and DieteticsVitamin B12Nutrition & DieteticsVitamin B-12PreventionB-12 dietary intakeMedicine (miscellaneous)Prevention of disease and conditionsCardiovascularB12 dietary intakeMethylmalonic acidVDP::Medisinske Fag: 700::Helsefag: 800::Ernæring: 811Food SciencesAnimal ProductionComplementary and Integrative Health3.3 Nutrition and chemopreventionHomocysteineVegetariansNutritionBritish Journal of Nutrition
researchProduct

Synthesis and biological evaluation of new imidazo[2,1-b][1,3,4]thiadiazole derivatives: as anticancer and antibiofilm agents, and preclinical invest…

2020

antiproliferative activityStaphylococcal biofilm inhibitorhypoxiaAnti-virulence agentpancreatic ductal adenocarcinomachemoresistancemodulation of EMTlactate dehydrogenaseproton-coupled folate transporterspheroids shrinkageSettore CHIM/08 - Chimica Farmaceuticamalignant pleural and peritoneal mesotheliomaanti-biofilm agentimidazo[21-b][134]thiadiazole derivativeinhibition of migrationPTK2/FAKxenograftpemetrexedprognosi
researchProduct

On Transition Structures for Hydride Transfer Step: A Theoretical Study of the Reaction Catalyzed by Dihydrofolate Reductase Enzyme

1996

Abstract A theoretical study is presented of the catalytic mechanism of dihydrofolate reductase (DHFR) enzyme based upon the characterization of the transition structure (TS) for the hydride transfer step. Analytical gradients at AM1 and PM3 semiempirical levels have been used to characterize the saddle point of index one (SPi-1) on global energy hypersurface for the hydride transfer in the active site of DHFR enzyme. The geometry, stereochemistry, electronic structure, and transition vector (TV) components associated to SPi-1 are qualitatively computational level independent. The TV amplitudes show primary and secondary isotope effects to be strongly coupled. The geometrical arrangement of…

biologyHydrideStereochemistryChemistryOrganic ChemistryActive siteElectronic structureBiochemistryEnzyme catalysisCatalysisCrystallographySaddle pointDrug DiscoveryDihydrofolate reductaseKinetic isotope effectbiology.proteinMolecular BiologyBioorganic Chemistry
researchProduct

2015

Chemical ligation has been used to alter motions in specific regions of dihydrofolate reductase from E. coli and to investigate the effects of localized motional changes on enzyme catalysis. Two isotopic hybrids were prepared; one with the mobile N-terminal segment containing heavy isotopes (2H, 13C, 15N) and the remainder of the protein with natural isotopic abundance, and the other one with only the C-terminal segment isotopically labeled. Kinetic investigations indicated that isotopic substitution of the N-terminal segment affected only a physical step of catalysis, whereas the enzyme chemistry was affected by protein motions from the C-terminal segment. QM/MM studies support the idea th…

biologyStereochemistryChemistryProtein dynamicsNatural abundanceGeneral ChemistryCatalysisEnzyme catalysisCatalysisIntramolecular forceKinetic isotope effectDihydrofolate reductasebiology.proteinChemical ligationAngewandte Chemie International Edition
researchProduct