Search results for "Genetic algorithm"

showing 10 items of 834 documents

Seed germination under osmotic stress across different wild populations of mountain rye (Secale strictum (C.Presl) C.Presl))

2020

The selection of resilient cultivars could help stem the losses in forage production due to a changing climate. Secale strictum is a wild grass with interesting potential as a forage crop. We studied the germination requirements of six wild S. strictum populations, representative of the whole species distribution range in Italy and occurring under different osmotic conditions (0 MPa, −0.8 MPa, −1.0 MPa, −1.2 MPa, −1.4 MPa and −1.6 MPa). Our aim was to find beneficial seed and germination traits for the possible use of this species as a crop. Different accessions of domesticated Secale cereale and ×Triticosecale were used as comparison. Some populations of S. strictum were drought tolerant a…

0106 biological sciencesOsmotic shockSettore BIO/02 - Botanica SistematicaDrought toleranceForagePlant ScienceBiology010603 evolutionary biology01 natural sciencesAgronomyGerminationSecale strictumSettore BIO/03 - Botanica Ambientale E ApplicataCultivarEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Crop wild relatives drought tolerance forage crop seed ecology seed germination010606 plant biology & botanyForage cropPlant Biosystems - An International Journal Dealing with all Aspects of Plant Biology
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Estimation of fitness from energetics and life-history data: An example using mussels.

2017

Changing environments have the potential to alter the fitness of organisms through effects on components of fitness such as energy acquisition, metabolic cost, growth rate, survivorship, and reproductive output. Organisms, on the other hand, can alter aspects of their physiology and life histories through phenotypic plasticity as well as through genetic change in populations (selection). Researchers examining the effects of environmental variables frequently concentrate on individual components of fitness, although methods exist to combine these into a population level estimate of average fitness, as the per capita rate of population growth for a set of identical individuals with a particul…

0106 biological sciencesPhenotypic plasticityEcology010604 marine biology & hydrobiologyBiology010603 evolutionary biology01 natural sciencesSurvivorship curveStatisticsPer capitaPopulation growthProduction (economics)Set (psychology)Ecology Evolution Behavior and SystematicsSelection (genetic algorithm)OrganismNature and Landscape ConservationEcology and evolution
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Selection for reproduction under short photoperiods changes diapause-associated traits and induces widespread genomic divergence.

2019

The work has been supported by the Academyof Finland to A.H. (project 267244) and Natural Environment Research Council (NERC) funding (NE/J020818/1 to M.G.R.; NE/L501852/1 to R.A.W.W.). The incidence of reproductive diapause is a critical aspect of life history in overwintering insects from temperate regions. Much has been learned about the timing, physiology and genetics of diapause in a range of insects, but how the multiple changes involved in this and other photoperiodically regulated traits are inter-related is not well understood. We performed quasinatural selection on reproduction under short photoperiods in a northern fly species, Drosophila montana, to trace the effects of photoper…

0106 biological sciencesPhysiology030310 physiologyQH301 BiologyCircadian clockGenome Insect01 natural sciencestalvehtiminenkylmänkestävyyscircadian clockmedia_commonvuorokausirytmi0303 health sciencesluonnonvalintagenome analysesReproductionPhenotypeAdaptation PhysiologicalCircadian RhythmCold TemperatureDrosophila melanogasterPhenotypeFemaleReproductionLocomotionendocrine systemmahlakärpäsetPeriod (gene)media_common.quotation_subjectPhotoperiodZoologyreproductive diapausefotobiologiaAquatic ScienceDiapauseBiology010603 evolutionary biology03 medical and health sciencesQH301Quantitative Trait Heritablephotoperiodic timerAnimalsCircadian rhythmMolecular BiologyGeneEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Critical day lenghtGenetic VariationDAScold tolerancelisääntyminenDiapauseChromosomes Insectcritical day lengthInsect ScienceperimähyönteisetLinear ModelsAnimal Science and ZoologyThe Journal of experimental biology
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Plasmodium relictum infection and MHC diversity in the house sparrow (Passer domesticus).

2010

Antagonistic coevolution between hosts and parasites has been proposed as a mechanism maintaining genetic diversity in both host and parasite populations. In particular, the high level of genetic diversity usually observed at the major histocompatibility complex (MHC) is generally thought to be maintained by parasite-driven selection. Among the possible ways through which parasites can maintain MHC diversity, diversifying selection has received relatively less attention. This hypothesis is based on the idea that parasites exert spatially variable selection pressures because of heterogeneity in parasite genetic structure, abundance or virulence. Variable selection pressures should select for…

0106 biological sciencesPlasmodium[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencessusceptibilityMajor Histocompatibility Complex[ SDE ] Environmental SciencesGene Frequency[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisResearch ArticlesGeneral Environmental ScienceGenetics0303 health sciencesbiologyPlasmodium relictumGeneral Medicine3. Good health[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyGenetic structure[SDE]Environmental Sciencesavian malariaGeneral Agricultural and Biological SciencesSparrowsMalaria AvianAntagonistic CoevolutionMajor histocompatibility complex010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biologyresistance03 medical and health sciencesAvian malariamedicinePasser domesticusAnimalsSelection GeneticAllelesSelection (genetic algorithm)030304 developmental biologyLocal adaptationGenetic diversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and Microbiologydiversifying selectionbiology.organism_classificationmedicine.diseaseImmunity InnatePlasmodium relictumbiology.protein[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Testing hypotheses in evolutionary ecology with imperfect detection: capture-recapture structural equation modeling.

2012

8 pages; International audience; Studying evolutionary mechanisms in natural populations often requires testing multifactorial scenarios of causality involving direct and indirect relationships among individual and environmental variables. It is also essential to account for the imperfect detection of individuals to provide unbiased demographic parameter estimates. To cope with these issues, we developed a new approach combining structural equation models with capture-recapture models (CR-SEM) that allows the investigation of competing hypotheses about individual and environmental variability observed in demographic parameters. We employ Markov chain Monte Carlo sampling in a Bayesian frame…

0106 biological sciencesPopulation Dynamicsselection gradient analysesBiologystate-space models010603 evolutionary biology01 natural sciencesModels BiologicalStructural equation modelingMark and recapture010104 statistics & probabilitystructural equation modelslife history tradeoffsAnimalsPasseriformes0101 mathematicsSet (psychology)Ecology Evolution Behavior and SystematicsSelection (genetic algorithm)Ecosystemcapture-recapture models[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologyModel selectionCyanistesindividual heterogeneitybiology.organism_classificationCausalityBiological Evolutionevolutionary ecologyEvolutionary ecology[SDE.BE]Environmental Sciences/Biodiversity and EcologyEcology
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Next-generation biological control

2020

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…

0106 biological sciencesProteomicsH10 Pests of plantsInternationalityComputer science[SDV]Life Sciences [q-bio]Laboratory of VirologySequence assemblybiological controlmicrobiome01 natural sciencesGenome editinggeneticsNagoya ProtocolLaboratory of EntomologyCYTOPLASMIC INCOMPATIBILITY2. Zero hunger0303 health sciencesQUANTITATIVE TRAIT LOCICommercefood and beveragesCONTROL AGENTSPE&RCBiosystematiekNASONIA-VITRIPENNISGUT CONTENT-ANALYSIS[SDE]Environmental SciencesTraitinsect breedingAXYRIDIS COLEOPTERA-COCCINELLIDAEOriginal ArticleLaboratory of GeneticsLIFE-HISTORY TRAITSGeneral Agricultural and Biological SciencesGenomicsContext (language use)Computational biology[SDV.BID]Life Sciences [q-bio]/Biodiversityartificial selectionQuantitative trait locusAnimal Breeding and GenomicsLaboratorium voor Erfelijkheidsleer010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyLaboratorium voor Virologiemodelling03 medical and health sciencesgenomics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyFokkerij en GenomicaPARASITOID WASPSelection (genetic algorithm)modelling.030304 developmental biologySEX DETERMINATIONOriginal ArticlesLaboratorium voor EntomologieWIASgenome assemblyBiosystematicsEPSartificial selection biological control genetics genome assembly genomics insect breeding microbiome modellingBiological Reviews
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Experimental Introgression To Evaluate the Impact of Sex Specific Traits on Drosophila melanogaster Incipient Speciation

2019

AbstractSex specific traits are involved in speciation but it is difficult to determine whether their variation initiates or reinforces sexual isolation. In some insects, speciation depends of the rapid change of expression in desaturase genes coding for sex pheromones. Two closely related desaturase genes are involved in Drosophila melanogaster pheromonal communication: desat1 affects both the production and the reception of sex pheromones while desat2 is involved in their production in flies of Zimbabwe populations. There is a strong asymmetric sexual isolation between Zimbabwe populations and all other “Cosmopolitan” populations: Zimbabwe females rarely copulate with Cosmopolitan males w…

0106 biological sciences[SDV]Life Sciences [q-bio]polymorphismeQH426-47001 natural sciencesheptacosadieneCourtshipmâleSexual Behavior Animalhydrocarbon polymorphismgenetique des populationsMatingévolutionGenetics (clinical)media_commonpheromone production0303 health sciencesbiologyBehavior AnimalIncipient speciationdésaturaseWhite (mutation)Genetics of SexDrosophila melanogasterPhenotypeSex pheromoneAlimentation et Nutritioneuropean corn-borercourtshipFemaleDrosophila melanogasterpyrale du maisfemale receptivitymedia_common.quotation_subjecthydrocarbure cuticulairediffusion de phéromoneparade sexuelleIntrogressionréceptivité femelle03 medical and health sciencesQuantitative Trait HeritableSex Factorsmaledesaturase geneGenetic algorithmexpressionevolutionGeneticsFood and NutritionAnimalstricoseneMolecular Biologycuticular hydrocarbon;tricosene;heptacosadiene;european corn-borer;pheromone production;desaturase gene;male;courtship;hydrocarbon polymorphism;female receptivity;evolution;mutation;populations;expressionGenetic Association Studies030304 developmental biologygène[SDV.BDLR]Life Sciences [q-bio]/Reproductive Biologybiology.organism_classificationpopulations010602 entomologyEvolutionary biologyunion européennecuticular hydrocarbonmutation
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Social phenotype extended to communities: Expanded multilevel social selection analysis reveals fitness consequences of interspecific interactions

2015

In social species, fitness consequences are associated with both individual and social phenotypes. Social selection analysis has quantified the contribution of conspecific social traits to individual fitness. There has been no attempt, however, to apply a social selection approach to quantify the fitness implications of heterospecific social phenotypes. Here, we propose a novel social selection based approach integrating the role of all social interactions at the community level. We extended multilevel selection analysis by including a term accounting for the group phenotype of heterospecifics. We analyzed nest activity as a model social trait common to two species, the lesser kestrel (Falc…

0106 biological sciencesbiologyEcologyFalco naumanniKestrelInterspecific competitionbiology.organism_classification010603 evolutionary biology01 natural sciencesPhenotype010601 ecologyNestGeneticsTraitGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsSelection (genetic algorithm)CoevolutionEvolution
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Evaluating field-scale sampling methods for the estimation of mean plant densities of weeds

2000

The weed flora (comprising seven species) of a field continuously grown with soyabean was simulated for 4 years, using semivariograms established from previous field observations. Various sampling methods were applied and compared for accurately estimating mean plant densities, for differing weed species and years. The tested methods were based on (a) random selection wherein samples were chosen either entirely randomly, randomly with at least 10 or 20 m between samples, or randomly after stratifying the field; (b) systematic selection where samples were placed along diagonals or along zig-zagged lines across the field; (c) predicted Setaria viridis (L.) P. Beaux seedling maps which were us…

0106 biological sciencesbiologyEcologySetaria viridisField experimentSampling (statistics)Sample (statistics)04 agricultural and veterinary sciencesPlant Sciencebiology.organism_classification01 natural sciencesKrigingStatistics040103 agronomy & agriculture0401 agriculture forestry and fisheries[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyWeedVariogramAgronomy and Crop ScienceEcology Evolution Behavior and SystematicsSelection (genetic algorithm)ComputingMilieux_MISCELLANEOUS010606 plant biology & botanyMathematics
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Chromosome numbers for the Italian flora: 11

2021

In this contribution, new chromosome data obtained on material collected in Italy are presented. It includes counts for Centaurea aegusae, Hieracium racemosum subsp. lucanum, H. australe subsp. australe, Lysimachia arvensis subsp. arvensis, Micromeria graeca subsp. graeca, and M. graeca subsp. consentina.

0106 biological sciencescytotaxonomyFloraSettore BIO/02 - Botanica SistematicafungicytogeographyBotanyZoologyPlant Sciencecytogeography; cytotaxonomy; endemic taxa; polyploidyBiology010603 evolutionary biology01 natural sciencesChromosome (genetic algorithm)QK1-989endemic taxabacteriaEcology Evolution Behavior and Systematicspolyploidy010606 plant biology & botany
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