Search results for "HILIC"

showing 10 items of 745 documents

Acquisition of Structure-guiding and Structure-forming Properties during Maturation from the Pro-silicatein to the Silicatein Form

2012

Silicateins are the key enzymes involved in the enzymatic polycondensation of the inorganic scaffold of the skeletal elements of the siliceous sponges, the spicules. The gene encoding pro-silicatein is inserted into the pCold TF vector, comprising the gene for the bacterial trigger factor. This hybrid gene is expressed in Escherichia coli and the synthesized fusion protein is purified. The fusion protein is split into the single proteins with thrombin by cleavage of the linker sequence present between the two proteins. At 23 °C, the 87 kDa trigger factor-pro-silicatein fusion protein is cleaved to the 51 kDa trigger factor and the 35 kDa pro-silicatein. The cleavage process proceeds and res…

DNA ComplementaryPolymersRecombinant Fusion Proteins02 engineering and technologyPlasma protein bindingCleavage (embryo)Models BiologicalBiochemistry03 medical and health sciencesThrombinPEG ratioEscherichia colimedicineAnimalsMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyPhotoelectron SpectroscopyTemperatureThrombinCell Biology021001 nanoscience & nanotechnologybiology.organism_classificationFusion proteinElasticityExtracellular MatrixPoriferaEnzymechemistryBiochemistryProtein Structure and FoldingPeptidesSuberites0210 nano-technologyHydrophobic and Hydrophilic InteractionsLinkerProtein Bindingmedicine.drugSuberitesJournal of Biological Chemistry
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Novel σ1 antagonists designed for tumor therapy: Structure – activity relationships of aminoethyl substituted cyclohexanes

2021

Abstract Depending on the substitution pattern and stereochemistry, 1,3-dioxanes 1 with an aminoethyl moiety in 4-position represent potent σ1 receptor antagonists. In order to increase the stability, a cyclohexane ring first replaced the acetalic 1, 3-dioxane ring of 1. A large set of aminoethyl substituted cyclohexane derivatives was prepared in a six-step synthesis. All enantiomers and diastereomers were separated by chiral HPLC at the stage of the primary alcohol 7, and their absolute configuration was determined by CD spectroscopy. Neither the relative nor the absolute configuration had a large impact on the σ1 affinity. The highest σ1 affinity was found for cis-configured benzylamines…

DU145 tumor cellsCachannelPrimary alcohol01 natural sciencesAminoethylcyclohexanes; Antagonistic activity; Biotransformation; Ca; 2+; influx assay; Calculated free energy of binding; CD spectroscopy; Chiral HPLC; DU145 tumor cells; Inhibition of human prostate tumor cell growth; Lipophilicity; Molecular dynamics simulations; Molecular interactions; per-residue binding free energy; Selectivity; Stereochemistry; Structure affinity relationships; Voltage gated Ca; 2+; channel; σ receptors; σ; 1; receptor affinityInhibition of human prostate tumor cell growthStereochemistryDrug DiscoveryMoietySelectivityBiotransformationσ receptor0303 health sciencesChemistryAminoethylcyclohexanesCD spectroscopyAbsolute configurationAminoethylcyclohexaneMolecular interactionGeneral MedicineAntagonistic activityper-residue binding free energyreceptor affinityLipophilicityVoltage gated CaStereochemistry12+Calculated free energy of bindingRetinal ganglion03 medical and health sciencesσMolecular dynamics simulationChiral HPLCLipophilicityMolecular interactionsStructure affinity relationship030304 developmental biologyPharmacologyDU145 tumor cellinflux assayMolecular dynamics simulations010405 organic chemistryOrganic ChemistryDiastereomer0104 chemical sciencesChiral column chromatographyσ receptorsStructure affinity relationshipsEnantiomerEuropean Journal of Medicinal Chemistry
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A Polyphenylene Dendrimer Drug Transporter with Precisely Positioned Amphiphilic Surface Patches

2014

The design and synthesis of a polyphenylene dendrimer (PPD 3) with discrete binding sites for lipophilic guest molecules and characteristic surface patterns is presented. Its semi-rigidity in combination with a precise positioning of hydrophilic and hydrophobic groups at the periphery yields a refined architecture with lipophilic binding pockets that accommodate defined numbers of biologically relevant guest molecules such as fatty acids or the drug doxorubicin. The size, architecture, and surface textures allow to even penetrate brain endothelial cells that are a major component of the extremely tight blood-brain barrier. In addition, low to no toxicity is observed in in vivo studies using…

DendrimersScaffoldEmbryo NonmammalianMaterials sciencePolymersStereochemistryBiomedical EngineeringPharmaceutical ScienceChemistry Techniques SyntheticBlood–brain barrierCell LineBiomaterialsMiceIn vivoDendrimerAmphiphilemedicineAnimalsHumansMoleculeTissue DistributionBinding siteZebrafishDrug CarriersBrainEndothelial CellsTransportermedicine.anatomical_structureDoxorubicinDrug DesignBiophysicsHydrophobic and Hydrophilic InteractionsAdvanced Healthcare Materials
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Shortcut nitrification-denitrification by means of autochthonous halophilic biomass in an SBR treating fish-canning wastewater

2017

Abstract Autochthonous halophilic biomass was cultivated in a sequencing batch reactor (SBR) aimed at analyzing the potential use of autochthonous halophilic activated sludge in treating saline industrial wastewater. Despite the high salt concentration (30 g NaCl L −1 ), biological oxygen demand (BOD) and total suspended solids (TSS), removal efficiencies were higher than 90%. More than 95% of the nitrogen was removed via a shortcut nitrification-denitrification process. Both the autotrophic and heterotrophic biomass samples exhibited high biological activity. The use of autochthonous halophilic biomass led to high-quality effluent and helped to manage the issues related to nitrogen removal…

DenitrificationEnvironmental EngineeringAutochthonous-halophilic bacteriaNitrogen0208 environmental biotechnologySequencing batch reactor02 engineering and technologyWastewater010501 environmental sciencesManagement Monitoring Policy and LawWaste Disposal Fluid01 natural sciencesFish-canning wastewaterIndustrial wastewater treatmentBioreactorsBiomassWaste Management and DisposalSBR0105 earth and related environmental sciencesTotal suspended solidsSewageSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleChemistryGeneral MedicinePulp and paper industryNitrification020801 environmental engineeringActivated sludgeWastewaterDenitrificationSewage treatmentNitrificationSaline wastewaterShortcut nitrification-denitrification
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Osseous oral hyaline ring granuloma mimicking a mandible tumor in a child with congenital agenesis of the corpus callosum

2017

Background Hyaline ring granuloma (HRG) of the oral cavity is an uncommon disorder considered to be a foreign-body reaction resulting from implantation of food vegetable particles. Microscopically, it is characterized by the presence of structures of hyaline rings in an inflamed fibrous tissue background, which contains multinucleated giant cells. Material and methods We present the case of a 4-year-old boy diagnosed with a mandible osseous HRG, which showed clinical and tomographic aspects suggestive of an aggressive bone tumor. Results The patient underwent surgical exploration and histopathologic analysis showed fragments composed predominantly of widespread dense connective tissue with …

Dense connective tissuePathologymedicine.medical_specialtyOdontologíaCase Report03 medical and health sciences0302 clinical medicineEosinophilicMedicineAgenesis of the corpus callosumGeneral DentistryHyalineOral Medicine and Pathologybusiness.industryMandible030206 dentistryAnatomy:CIENCIAS MÉDICAS [UNESCO]medicine.diseaseCiencias de la saludGiant cell030220 oncology & carcinogenesisGranulomaUNESCO::CIENCIAS MÉDICASChronic Inflammatory InfiltratebusinessJournal of Clinical and Experimental Dentistry
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Fluorinated Heterocyclic Compounds− The First Example of an Irreversible Ring-Degenerate Rearrangement on Five-Membered Heterocycles by Attack of an …

2004

The reactions of 5-perfluoroalkyl-1,2,4-oxadiazoles 3 with hydroxylamine in DMF give the regioisomeric 3-perfluoroalkyl-1,2,4-oxadiazoles 4 in excellent yields. This process is the first example of ring-degenerate rearrangement (RDR) occurring on five-membered heterocycles by attack of an external bidentate nucleophile, which replaces two heteroatoms of the ring. We suggest that an ANRORC-like mechanism occurs in which the addition of the nucleophilic nitrogen atom (NH2OH) on the C(5) atom of 3 is followed by ring opening and irreversible ring-degenerate closure by attack of the nucleophilic oxygen atom (=NOH) on the C(3) atom of the original ring, realizing an elegant and efficient synthes…

DenticityStereochemistryrearrangementOrganic ChemistryHeteroatomDegenerate energy levelsAtom (order theory)General MedicineRing (chemistry)Medicinal chemistrychemistry.chemical_compoundHydroxylaminechemistryNucleophilering-ring interconversionNucleophilic substitutionAb initio computationsnucleophilic substitutionPhysical and Theoretical ChemistryheterocycleEuropean Journal of Organic Chemistry
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On the structure of 3-acetylamino-5-methyl-1,2,4-oxadiazole and on the fully degenerate rearrangements (FDR) of its anion: a stimulating comparison b…

2009

An accurate crystal structure determination has provided evidence for a planar conformation for 3-acetylamino-5-methyl-1,2,4-oxadiazole (5), in agreement with quantum-mechanical calculations in the gas phase. In the crystal, a series of strong intermolecular N7H7….O9 hydrogen bonds link the amido groups of different molecules, causing the formation of infinite parallel ordered chains. The effect of the DMSO solvent on the energy and charge distribution of compound 5 and on its relevant 5− anion, involved in a fully degenerate rearrangement (FDR), has been deepened by quantum-mechanical DFT calculations. The calculated energy barrier for the FDR increases in going from in vacuo to DMSO, in a…

DeprotonationComputational chemistryHydrogen bondChemistryOrganic ChemistryIntermolecular forceNucleophilic substitutionSide chainMoleculeCrystal structurePhysical and Theoretical ChemistryRing (chemistry)Journal of Physical Organic Chemistry
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High-performance liquid chromatography of lactose with evaporative light scattering detection, applied to determine fine particle dose of carrier in …

2005

A method for quantification of the fine particle dose of lactose is described, using a hydrophilic interaction chromatography (HILIC) method and evaporative light scattering detection. The HILIC method used an aminopropyl column and a mobile phase consisting of acetonitril/water (80/20, v/v) for isocratic elution. Sensitive chromatography was obtained using a low concentration of water in the extraction solvent. The detection limit (RSD10%) at an injection volume of 10 microL is 10 microg/mL. Linearity was obtained in the range of 10-80 microg/mL (R(2)0.99). A relative standard deviation (RSD) of 0.5% (N=6) demonstrated good precision of the optimized method.

Detection limitChromatographyLightChemistryHydrophilic interaction chromatographyOrganic ChemistryExtraction (chemistry)Analytical chemistryReproducibility of ResultsLactoseGeneral MedicineBiochemistryHigh-performance liquid chromatographyLight scatteringAnalytical ChemistrySolventChromatography detectorAdministration InhalationScattering RadiationParticlePowdersChromatography High Pressure LiquidJournal of Chromatography A
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Development of stir bar sorptive-dispersive microextraction mediated by magnetic nanoparticles and its analytical application to the determination of…

2014

A novel microextraction technique combining the principles of stir bar sorptive extraction (SBSE) and dispersive micro-solid phase extraction (DμSPE) is presented. The main feature of the method is the use of a neodymium-core stirring bar physically coated with a hydrophobic magnetic nanosorbent. Depending on stirring speed, the magnetic sorbent either acts as a coating material to the stir bar, thus affording extraction alike SBSE, or as a dispersed nanosorbent medium for the collection and extraction of the target analytes, in close analogy to DμSPE. Once the stirring process is finished, the strong magnetic field of the stir bar prevails again and rapidly retrieves the dispersed MNPs. Al…

Detection limitSorbentChromatographyChemistryOsmolar ConcentrationOrganic ChemistryExtraction (chemistry)Reproducibility of ResultsWaterGeneral MedicineHydrogen-Ion Concentrationengineering.materialBiochemistryAnalytical ChemistryCoatingDesorptionPhase (matter)engineeringMagnetic nanoparticlesSurface modificationOrganic ChemicalsMagnetite NanoparticlesHydrophobic and Hydrophilic InteractionsSolid Phase MicroextractionJournal of Chromatography A
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Bio-metal-organic frameworks for molecular recognition and sorbent extraction of hydrophilic vitamins followed by their determination using HPLC-UV

2020

A bio-metal-organic framework (bio-MOF) derived from the amino acid L-serine has been prepared in bulk form and evaluated as sorbent for the molecular recognition and extraction of B-vitamins. The functional pores of bio-MOF exhibit high amounts of hydroxyl groups jointly directing other supramolecular host-guest interactions thus providing the recognition of B-vitamins in fruit juices and energy drinks. Single-crystal X-ray diffraction studies reveal the specific B-vitamin binding sites and the existence of multiple hydrogen bonds between these target molecules and the framework. It offered unique snapshots to accomplish an efficient capture of these solutes in complex aqueous matrices. Fo…

Detection limitVitaminesSorbentChromatographySurface PropertiesUltraviolet RaysElutionChemistryHydrophilic interaction chromatography010401 analytical chemistryExtraction (chemistry)Supramolecular chemistryQuímica analítica010402 general chemistry01 natural sciences0104 chemical sciencesAnalytical ChemistryBegudesMolecular recognitionVitamin B ComplexAdsorptionSolid phase extractionParticle SizeHydrophobic and Hydrophilic InteractionsMetal-Organic FrameworksMicrochimica Acta
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