Search results for "Hirshfeld surface"

showing 10 items of 41 documents

Crystal structure and Hirshfeld surface analysis of (E)-3-[(4-fluorobenzylidene)amino]-5-phenylthiazolidin-2-iminium bromide

2019

TARAMAPUBMED TARAMASCOPUS TARAMAWOS In the cation of the title salt, C16H15FN3S+·Br−, the phenyl ring is disordered over two sets of sites with a refined occupancy ratio of 0.503 (4):0.497 (4). The mean plane of the thia­zolidine ring makes dihedral angles of 13.51 (14), 48.6 (3) and 76.5 (3)° with the fluoro­phenyl ring and the major- and minor-disorder components of the phenyl ring, respectively. The central thia­zolidine ring adopts an envelope conformation. In the crystal, centrosymmetrically related cations and anions are linked into dimeric units via N—H...Br hydrogen bonds, which are further connected by weak C—H...Br hydrogen bonds into chains parallel to [110]. Hirshfeld surface an…

crystal structureStackingCrystal structure010402 general chemistryRing (chemistry)01 natural sciencesCrystalHirshfeld surface analysis.chemistry.chemical_compoundBromideThia­zolidine ringcharge assisted hydrogen bondingHirshfeld surface analysisGeneral Materials ScienceBenzeneCrystallography010405 organic chemistryHydrogen bondIminiumdisorderGeneral ChemistryCondensed Matter::Mesoscopic Systems and Quantum Hall EffectCondensed Matter Physics0104 chemical sciencesCrystallographychemistryQD901-999thiazolidine ringActa Crystallographica Section E Crystallographic Communications
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Stabilisation of Exotic Tribromide (Br3−) Anions via Supramolecular Interaction with A Tosylated Macrocyclic Pyridinophane. A Serendipitous Case.

2020

Tetraaza-macrocyclic pyridinophane L-Ts, decorated with a p-toluenesulfonyl (tosyl

crystal structureStackingSupramolecular chemistryPharmaceutical ScienceCrystal structureAnalytical Chemistrylcsh:QD241-441symbols.namesakechemistry.chemical_compoundlcsh:Organic chemistryTosylDrug DiscoveryPyridineHirshfeld surface analysisPhysical and Theoretical ChemistryN-heterocyclesanion- interactionsTribromideHydrogen bondOrganic Chemistryanion complexesCrystallographychemistryChemistry (miscellaneous)symbolsMolecular Medicinevan der Waals forceMolecules
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Intramolecular 1,5-S...N σ-hole interaction in (E)-N′-(pyridin-4-ylmethylidene)thiophene-2-carbohydrazide

2020

The hydrazide-hydrazone forms inverse dimers via hydrogen bonding, but its conformation is defined by the presence of an intra­molecular chalcogen bond. Electrostatic forces dominate in the crystal packing and give rise to a layered supra­molecular structure.

crystal structurehirshfeld surfaceDouble bondImineStackingCrystal structureCarbohydrazide010402 general chemistryRing (chemistry)01 natural sciencesResearch Communicationsenergy frameworkslcsh:Chemistrychemistry.chemical_compoundchalcogen bondingGeneral Materials Sciencechemistry.chemical_classificationQuantitative Biology::Biomoleculesintermolecular interaction energies010405 organic chemistryHydrogen bondGeneral Chemistryinter­molecular inter­action energieshydrogen bondingCondensed Matter Physics4-pyridinecarboxaldehyde 2-thienyl hydrazone0104 chemical sciencesCrystallographylcsh:QD1-999chemistry4-pyridine­carboxaldehyde 2-thienyl hydrazoneMonoclinic crystal systemActa Crystallographica Section E Crystallographic Communications
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Crystal structures of (E)-3-(4-hydroxybenzylidene)chroman-4-one and (E)-3-(3-hydroxybenzylidene)-2-phenylchroman-4-one

2019

The synthesis and crystal structures of (E)-3-(4-hydroxybenzylidene)chroman-4-one, C16H12O3, I, and (E)-3-(3-hydroxybenzylidene)-2-phenylchroman-4-one, C22H16O3, II, are reported. These compounds are of interest with respect to biological activity. Both structures display intermolecular C—H...O and O—H...O hydrogen bonding, forming layers in the crystal lattice. The crystal structure of compound I is consolidated by π–π interactions. The lipophilicity (logP) was determined as it is one of the parameters qualifying compounds as potential drugs. The logP value for compound I is associated with a larger contribution of C...H interaction in the Hirshfeld surface.

crystal structurelipophilicity index010405 organic chemistryChemistryHydrogen bondGeneral ChemistryCrystal structure010402 general chemistryCondensed Matter Physicschromanone derivative01 natural sciences0104 chemical scienceslcsh:ChemistryCrystallographylcsh:QD1-999hirshfeld surface analysisLipophilicityHirshfeld surface analysisGeneral Materials Scienceflavanone derivativeActa Crystallographica Section E Crystallographic Communications
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A second solvatomorph of poly[[μ4-N,N′-(1,3,5-oxadiazinane-3,5-diyl)bis(carbamoylmethanoato)]nickel(II)dipotassium] : crystal structure, Hirshfeld su…

2021

The title compound, poly[triaquabis[μ4-N,N′-(1,3,5-oxadiazinane-3,5-diyl)bis(carbamoylmethanoato)]dinickel(II)tetrapotassium], [K4Ni2(C7H6N4O7)2(H2O)3] n , is a second solvatomorph of poly[(μ4-N,N′-(1,3,5-oxadiazinane-3,5-diyl)bis(carbamoylmethanoato)nickel(II)dipotassium] reported previously [Plutenko et al. (2021). Acta Cryst. E77, 298–304]. The asymmetric unit of the title compound includes two structurally independent complex anions [Ni(C7H6N4O7)]2−, which exhibit an L-shaped geometry and consist of two almost flat fragments perpendicular to one another: the 1,3,5-oxadiazinane fragment and the fragment including other atoms of the anion. The central Ni atom is in a square-planar N2O2 co…

crystal structureshape analysischemistry.chemical_elementCrystal structureEnergy minimizationIonpseudomacrocyclic ligandCrystalchemistry.chemical_compoundtemplate reactionSHAPE analysisAmidehirshfeld surface analysisAtomHirshfeld surface analysisGeneral Materials Sciencesemi-empirical geometry optimizationCrystallographynickel(ii) complexGeneral ChemistrykompleksiyhdisteetCondensed Matter Physicsnickel(II) complexkiteetTemplate reactionNickelCrystallographychemistryQD901-999nikkelihydrazide-based ligand
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Crystal structure and Hirshfeld surface analysis of (2E)-3-(3-bromo-4-fluorophenyl)-1-(3,4-dimethoxyphenyl)prop-2-en-1-one

2018

The title compound is constructed from two aromatic rings (3-bromo-4-fluoro­phenyl and 3,4-di­meth­oxy­phen­yl), which are linked by a C=C—C(=O)—C enone bridge and form a dihedral angle of 17.91 (17)°. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds enclosing rings of (14) graph-set motif to form layers parallel to (10).

hydrogen contactsdi­meth­oxy­phenyl ringcrystal structureHydrogenchemistry.chemical_elementCrystal structureDihedral angle010402 general chemistry010403 inorganic & nuclear chemistry01 natural sciencesResearch CommunicationsCrystalsymbols.namesakechemistry.chemical_compound3-bromo-4-fluorophenyl ringGeneral Materials Sciencedimethoxyphenyl ring3-bromo-4-fluoro­phenyl ringCrystallographyHydrogen bondHirshfeld surfaceAromaticityGeneral ChemistryCondensed Matter::Mesoscopic Systems and Quantum Hall EffectCondensed Matter Physics0104 chemical sciencesCrystallographychemistryQD901-999symbolsvan der Waals forceEnoneActa Crystallographica Section E Crystallographic Communications
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The enrichment ratio of atomic contacts in crystals, an indicator derived from the Hirshfeld surface analysis

2014

An enrichment ratio is derived from the decomposition of the crystal contact surface between pairs of interacting chemical species. The propensity of different contact types to form is investigated.

inorganic chemicalsHydrogeneducationStackingchemistry.chemical_element010402 general chemistrybehavioral disciplines and activities01 natural sciencesBiochemistryCrystal[CHIM.CRIS]Chemical Sciences/CristallographyHirshfeld surface analysisGeneral Materials ScienceChemical compositionhealth care economics and organizationsCrystallography010405 organic chemistryChemistryHydrogen bondIntermolecular forceGeneral ChemistryCondensed Matter::Mesoscopic Systems and Quantum Hall EffectCondensed Matter PhysicsResearch Papersfingerprint plotshumanities0104 chemical sciencesCrystallographyChemical speciesQD901-999Fluorineenrichment ratiocrystal packingIUCrJ
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Stereoselective Synthesis of New 4-Aryl-5-indolyl-1,2,4-triazole S- and N-β-Galactosides: Characterizations, X-ray Crystal Structure and Hirshfeld Su…

2023

5-(1H-Indol-2-yl)-4-phenyl-2,4-dihydro-3H-1,2,4-triazole-3-thione 1a and 4-(4-chlorophenyl)-5-(1H-indol-2-yl)-2,4-dihydro-3H-1,2,4-triazole-3-thione 1b were galactosylated in the presence of NaHCO3 in ethanol to produce S-galactosides 3,4, whereas, in the presence of K2CO3 in acetone they produced a mixture of S- and N-galactosides 3-6 with a higher yield of S-galactosides over the respective N-galactosides. Improvement in the yields of N-galactosides was produced by thermal migration of the galactosyl moiety from sulfur to nitrogen using fusion. β-Stereoselectivity of galactosylation was determined using the coupling constant value 3J1,2, which exceeded 9.0 Hz in all prepared galactos…

kemiallinen synteesiHirshfeld surfaceGeneral Chemical EngineeringCondensed Matter PhysicsInorganic Chemistrygalactoside124-triazoleindoleglykosiditGeneral Materials Scienceheterosykliset yhdisteetindole; 124-triazole; galactoside; X-ray single crystal; Hirshfeld surfaceröntgenkristallografiaX-ray single crystalCrystals
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Non-covalent interactions of N-phenyl-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide derivatives—a case of intramolecular N-oxide hydrogen bonds

2017

The crystal structures of new N-phenyl-1,5-dimethyl-1H-imidazole-4-carboxamide 3-oxide derivatives are reported. The results of X-ray diffraction showed the existence of intramolecular hydrogen bonding between carboxamide nitrogen donors and N-oxide oxygen acceptors. The use of Quantum Theory of Atoms in Molecules allowed its classification as a strong interaction, with energy about 10 kcal/mol, and of intermediate character between closed shell and shared bonds. Comparison of experimental data and quantum theoretical calculations indicated that a substituent attached to the phenyl ring in the para position influences the strength and geometry of the title hydrogen bonding. Stronger π-elect…

medicine.drug_classLow-barrier hydrogen bondintramolecular hydrogen bondSubstituentCarboxamideN-oxide group010402 general chemistry01 natural scienceschemistry.chemical_compoundComputational chemistrymedicineNon-covalent interactionsHirshfeld surface analysisPhysical and Theoretical Chemistrychemistry.chemical_classification010405 organic chemistryHydrogen bondIntermolecular forceAtoms in moleculesCondensed Matter Physicshydrogen bonding0104 chemical sciencesCrystallographychemistryQTAIMIntramolecular forcesubstituent effectStructural Chemistry
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Crystal structure and Hirshfeld surface analysis of (Z)-4-chloro-N′-(4-oxothiazolidin-2-ylidene)benzenesulfonohydrazide monohydrate

2018

The asymmetric unit of the title thiazole derivative containing a sulfonylhydrazinic moiety, C9H8ClN3O3S2·H2O, consists of two independent molecules and two water molecules. The central parts of the molecules are twisted as both the molecules are bent at both the S and N atoms. In the crystal, N—H...N, N—H...O, C—H...O and O—H...O hydrogen-bonding interactions connect the molecules, forming layers parallel to the ab plane. Two-dimensional fingerprint plots associated with the Hirshfeld surface show that the largest contributions to the crystal packing come from O...H/H...O (32.9%) and H...H (22.6%) interactions.

thiazole derivativecrystal structureCrystallography010405 organic chemistryHydrogen bondBent molecular geometryGeneral ChemistryCrystal structure010403 inorganic & nuclear chemistryCondensed Matter PhysicsHydrazide01 natural sciences0104 chemical sciencesCrystalchemistry.chemical_compoundCrystallographychemistryQD901-999hydrogen bondsMoietyHirshfeld surface analysisGeneral Materials SciencePhysics::Chemical PhysicsBenzeneDerivative (chemistry)Acta Crystallographica Section E: Crystallographic Communications
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