Search results for "Hydrates"

showing 10 items of 484 documents

AtPGAP1 functions as a GPI inositol-deacylase required for efficient transport of GPI-anchored proteins

2021

Abstract Glycosylphosphatidylinositol (GPI)-anchored proteins (GPI-APs) play an important role in a variety of plant biological processes including growth, stress response, morphogenesis, signaling, and cell wall biosynthesis. The GPI anchor contains a lipid-linked glycan backbone that is synthesized in the endoplasmic reticulum (ER) where it is subsequently transferred to the C-terminus of proteins containing a GPI signal peptide by a GPI transamidase. Once the GPI anchor is attached to the protein, the glycan and lipid moieties are remodeled. In mammals and yeast, this remodeling is required for GPI-APs to be included in Coat Protein II-coated vesicles for their ER export and subsequent t…

Signal peptideGlycanGenotypePhysiologyGlycosylphosphatidylinositolsPlant ScienceGenes Plantchemistry.chemical_compoundGene Expression Regulation PlantArabidopsisGeneticsArabidopsis thalianaInositolbiologyChemistryArabidopsis ProteinsEndoplasmic reticulumGenetic VariationMembrane Proteinsbiology.organism_classificationYeastPhosphoric Monoester HydrolasesCell biologyFocus Issue on Transport and Signalingcarbohydrates (lipids)Protein Transportbiology.proteinlipids (amino acids peptides and proteins)Function (biology)
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Function of AtPGAP1 in GPI anchor lipid remodeling and transport to the cell surface of GPI-anchored proteins

2021

ABSTRACTGPI-anchored proteins (GPI-APs) play an important role in a variety of plant biological processes including growth, stress response, morphogenesis, signalling and cell wall biosynthesis. The GPI-anchor contains a lipid-linked glycan backbone that is synthesized in the endoplasmic reticulum (ER) where it is subsequently transferred to the C-terminus of proteins containing a GPI signal peptide by a GPI transamidase. Once the GPI anchor is attached to the protein, the glycan and lipid moieties are remodelled. In mammals and yeast, this remodelling is required for GPI-APs to be included in Coat Protein II (COPII) coated vesicles for their ER export and subsequent transport to the cell s…

Signal peptideGlycanbiologyChemistryEndoplasmic reticulumCellCoated vesiclebiology.organism_classificationCell biologycarbohydrates (lipids)chemistry.chemical_compoundmedicine.anatomical_structureArabidopsismedicinebiology.proteinlipids (amino acids peptides and proteins)InositolCOPII
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Characterization of a glycosylphosphatidylinositol-bound cell-wall protein (GPI-CWP) in Yarrowia lipolytica.

2004

The structure and composition of the cell wall of yeast has so far been studied mainly in Saccharomyces cerevisiae. It is basically made up of three components: beta-glucans, chitin and mannose-containing glycoproteins, also called mannoproteins. Most covalently bound cell-wall mannoproteins belong to the so-called glycosylphosphatidylinositol cell-wall protein (GPI-CWP) family, cell-wall proteins that are bound through the remnant of a GPI residue to 1,6-beta-glucan. The non-conventional yeast Yarrowia lipolytica shares Generally Regarded As Safe (GRAS) status with S. cerevisiae, has some industrial applications and is increasingly being proposed as a host for the production of recombinant…

Signal peptideSaccharomyces cerevisiae ProteinsGlycosylphosphatidylinositolsSaccharomyces cerevisiaeGenes FungalMolecular Sequence DataYarrowiaSaccharomyces cerevisiaeBiologyMicrobiologyGene productFungal ProteinsSpecies SpecificityCell WallAmino Acid SequenceDNA FungalPeptide sequencechemistry.chemical_classificationMembrane GlycoproteinsBase SequenceSequence Homology Amino AcidFungal geneticsMembrane ProteinsYarrowiabiology.organism_classificationYeastcarbohydrates (lipids)BiochemistrychemistryGlycoproteinMicrobiology (Reading, England)
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Synthesis, Characterization, and Saccharide Binding Studies of Bile Acid − Porphyrin Conjugates

2007

Synthesis and characterization of bile acid-porphyrin conjugates (BAPs) are reported. Binding of saccharides with BAPs in aqueous methanol was studied by monitoring changes in the visible absorption spectral of the porphyrin-moieties. Although these studies clearly showed absorbance changes, suggesting quite high if non-selective binding, the mass spectral studies do not unambiguously support these results.

Spectrometry Mass Electrospray IonizationMagnetic Resonance SpectroscopyPorphyrinsmedicine.drug_classElectrospray ionizationCarbohydratesPharmaceutical ScienceESI MS.ArticleAnalytical ChemistryAbsorbanceBile Acids and Saltslcsh:QD241-441chemistry.chemical_compoundUltraviolet visible spectroscopylcsh:Organic chemistryHeterocyclic Compoundsvisible spectroscopyDrug Discoverymedicinepolycyclic compoundsOrganic chemistryPhysical and Theoretical ChemistrysaccharideAqueous solutionBile acidMolecular StructureOrganic Chemistry1H-NMRPorphyrinCombinatorial chemistryBile acidschemistryChemistry (miscellaneous)Proton NMRMolecular Medicinesense organsporphyrinConjugateMolecules
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Chemoenzymatic Synthesis of Functional Sialyl LewisX Mimetics with a Heteroaromatic Core

2014

Functional mimetics of the sialyl Lewis(X) tetrasaccharide were prepared by the enzymatic sialylation of a 1,3-diglycosylated indole and a glycosyl azide, which was subsequently transformed into a 1,4-diglycosylated 1,2,3-triazole, by using the trans-sialidase of Trypanosoma cruzi. These compounds inhibited the binding of E-, L-, and P-selectin-coated nanoparticles to polyacrylamide-bound sialyl-Lewis(X) -containing neighboring sulfated tyrosine residues (sTyr/sLe(X) -PAA) at low or sub-millimolar concentrations. Except for E-selectin, the mimetics showed higher activities than the natural tetrasaccharide.

Spectrometry Mass Electrospray IonizationStereochemistryProton Magnetic Resonance SpectroscopyTrypanosoma cruziMolecular Sequence DataNeuraminidaseOligosaccharidessaccharide mimeticsBiochemistryenzyme catalysisEnzyme catalysischemistry.chemical_compoundSulfationTetrasaccharideAnimalsGlycosylTyrosineCarbon-13 Magnetic Resonance SpectroscopySialyl Lewis X AntigenGlycoproteinsIndole testheterocyclesOrganic ChemistryMolecular Mimicrycell adhesionGeneral ChemistryFull Paperscarbohydrates (lipids)Sialyl-Lewis XchemistryCarbohydrate SequenceSelectinsAzideChemistry, an Asian Journal
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Phase diagrams calculated for flowing polymer solutions: spinodal and three phase conditions

1998

Spinodal lines and critical points (CPs) are calculated for flowing solutions of polystyrene in trans-decalin. Three types of CPs can be distinguished: The first consists of stable CPs (ordinary critical line) and originates from the CP of the quiescent system. The other two CPs are bound to shear. Additional stable CPs (extraordinary critical line) result for higher polymer concentrations and unstable CPs for intermediate concentrations. Ordinary and unstable critical line merge in a heterogeneous double CP. The coexistence of three phases in the flowing system (eulytic points) comes to an end as two of them merge upon an increase in shear rate at a critical end point.

SpinodalPolymers and PlasticsChemistryThermodynamicsGeneral ChemistryEntropy of mixingCondensed Matter Physicscomplex mixturesCritical point (mathematics)carbohydrates (lipids)Shear ratestomatognathic diseasesstomatognathic systemThree-phaseCritical linePhenomenological modelMaterials ChemistryPhase diagramPolymer Bulletin
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Characterization of antimicrobial properties on the growth of S. aureus of novel renewable blends of gliadins and chitosan of interest in food packag…

2007

The biocide properties of chitosan-based materials have been known for many years. However, typical antimicrobial formulations of chitosan, mostly chitosonium salts, are known to be very water sensitive materials which may impair their use in many application fields such as food packaging or food coating applications. This first work reports on the development and characterization of the antimicrobial properties of novel fully renewable blends of chitosan with more water-resistant gliadin proteins isolated from wheat gluten. Chitosan release to the nutrient broth from a wide range of blends was studied making use of the ninhydrin method. The results indicated that both pure chitosan and its…

Staphylococcus aureusBiocideColony Count MicrobialActive packagingFood Contaminationmacromolecular substancesengineering.materialMicrobiologyGliadinChitosanchemistry.chemical_compoundFood PreservationFood scienceChitosanbusiness.industryFood Packagingtechnology industry and agricultureGeneral Medicineequipment and suppliesAntimicrobialAnti-Bacterial AgentsBiotechnologyFood coatingcarbohydrates (lipids)Food packagingSolubilitychemistryNinhydrinFood PreservativesengineeringFood TechnologyBiopolymerbusinessFood ScienceInternational Journal of Food Microbiology
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Responses of Young Peach Trees to Root Confinement

1994

Rooted cuttings of Nemaguard peach [Prunus persica (L.) Batsch.] were grown in 0.18-, 0.36-, 0.90-, and 2.40-liter containers for 16 weeks to study the influence of root confinement on growth, gas exchange, water uptake, and leaf carbohydrate and nutrient content. An automatic nutrient-solution dispensing system was used to ensure uniform fertility among treatments and to prevent drought stress. Leaf area and stem length were reduced by root confinement 6 to 7 weeks after transplanting, and differences among treatments increased throughout the experiment. Final tree dry weights were reduced by 51% over a 13-fold reduction in rooting volume, but dry weight partitioning was largely unaffected…

StarchRoot systemHorticultureBiologySettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreechemistry.chemical_compoundPrunusCuttingHorticulturePRUNUS PERSICA NEMAGUARD ROOT HYDRAULIC CONDUCTIVITY PHOTOSYNTHESIS NUTRITION RESTRICTED ROOT ZONE VOLUME RESTRICTED ROOT ZONE VOLUME NONSTRUCTURAL CARBOHYDRATESNutrientchemistryDry weightBotanyGeneticsSorbitolTransplantingJournal of the American Society for Horticultural Science
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On the dimerization of the primitive tRNAs: implications in the origin of genetic code.

2002

RNAs that catalyse their own aminoacylation have been recently selected in vitro. These findings support the notion that the primitive aminoacyl-tRNA synthetases may have been RNAs. In this paper, we propose a structural model for the first aminoacyl-tRNA synthetase consisting of an RNA complex formed between two primitive tRNA molecules through two intermolecular loop-strand interactions, and with implications in the origin of the genetic code.

Statistics and ProbabilityGeneticsGeneral Immunology and MicrobiologyModels GeneticApplied MathematicsRNAAminoacylationGeneral MedicineBiologyGenetic codeenvironment and public healthGeneral Biochemistry Genetics and Molecular Biologyenzymes and coenzymes (carbohydrates)RNA TransferGenetic CodeModeling and SimulationTransfer RNAbacteriaAnimalsGeneral Agricultural and Biological SciencesDimerizationJournal of theoretical biology
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Crystallization and preliminary X-ray studies of mouse centrin1.

2005

The expression, purification, crystallization and preliminary X-ray diffraction studies of mouse centrin1 are reported. Centrins belong to a family of Ca{sup 2+}-binding EF-hand proteins that play a fundamental role in centrosome duplication and the function of cilia. To shed light on the structure–function relationship of these proteins, mouse centrin1 has been crystallized. The mouse centrin1 has been expressed in Escherichia coli as a GST-centrin fusion protein containing a thrombin protease cleavage site between the fusion partners. Two constructs with different linking-sequence lengths were expressed and purified. Thrombin cleavage yielded functional centrin1 and N-terminally extended …

StereochemistryChromosomal Proteins Non-HistoneMolecular Sequence DataBiophysicsmacromolecular substancesCleavage (embryo)Crystallography X-RayBiochemistrylaw.inventionchemistry.chemical_compoundMiceStructure-Activity RelationshipThrombinStructural BiologylawGeneticsmedicineEscherichia coliAnimalsCentrosome duplicationAmino Acid SequenceCrystallizationDose-Response Relationship DrugCalcium-Binding ProteinsSpace groupCondensed Matter PhysicsFusion proteinRecombinant ProteinsCrystallographyenzymes and coenzymes (carbohydrates)KineticschemistryCrystallization CommunicationsX-ray crystallographybiological scienceshealth occupationsbacteriaCrystallizationEthylene glycolmedicine.drugActa crystallographica. Section F, Structural biology and crystallization communications
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