Search results for "Hydrogen-ion concentration"

showing 10 items of 769 documents

Looking for Hidden Enemies of Metabarcoding: Species Composition, Habitat and Management Can Strongly Influence DNA Extraction while Examining Grassl…

2021

Despite the raising preoccupation, the critical question of how the plant community is composed belowground still remains unresolved, particularly for the conservation priority types of vegetation. The usefulness of metabarcoding analysis of the belowground parts of the plant community is subjected to a considerable bias, that often impedes detection of all species in a sample due to insufficient DNA quality or quantity. In the presented study we have attempted to find environmental factors that determine the amount and quality of DNA extracted from total plant tissue from above- and belowground samples (1,000 and 10,000 cm2). We analyzed the influence of land use intensity, soil properties…

0106 biological sciencesDNA qualitylcsh:QR1-502Plant Roots01 natural sciencesBiochemistrylcsh:MicrobiologyGrasslandgraminoid vegetationSoilCalamagrostis epigejosзлаковая растительностьSoil pHVegetation typeBiomassDNA extractionHolcus lanatusgeography.geographical_feature_categoryEcologybiologyвидовой составBiodiversityVegetationHydrogen-Ion ConcentrationPlantsGrasslandпастбищные сообществаЦентральная Европаbelowground diversityRegression AnalysisSeasonsДНКMagnesium OxideRiskrootsDNA PlantNitrogenPoaceae010603 evolutionary biologyкорнеплодыArticleCoronillaDNA Barcoding TaxonomicMolecular BiologyEcosystemgeographyсреда обитанияCentral EuropePlant communityDNAbiology.organism_classificationAgronomyметабаркодированиеPoland010606 plant biology & botanyBiomolecules
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Ocean acidification impairs vermetid reef recruitment

2014

Vermetids form reefs in sub-tropical and warm-temperate waters that protect coasts from erosion, regulate sediment transport and accumulation, serve as carbon sinks and provide habitat for other species. The gastropods that form these reefs brood encapsulated larvae; they are threatened by rapid environmental changes since their ability to disperse is very limited. We used transplant experiments along a natural CO2 gradient to assess ocean acidification effects on the reef-building gastropod Dendropoma petraeum. We found that although D. petraeum were able to reproduce and brood at elevated levels of CO2, recruitment success was adversely affected. Long-term exposure to acidified conditions…

0106 biological sciencesDendropoma petraeumGeologic Sediments010504 meteorology & atmospheric sciencesOceans and SeasGastropoda01 natural sciencesArticleCLIMATE-CHANGE ECOLOGYWater MovementsAnimals14. Life underwaterReefMollusca0105 earth and related environmental sciencesgeographyMultidisciplinarygeography.geographical_feature_categorybiologyEcologyCoral Reefs010604 marine biology & hydrobiologyfungiECOSYSTEM ECOLOGYWaterOcean acidificationCoral reefCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationBroodFisheryHabitatEnvironmental scienceECOSYSTEM ECOLOGY; CLIMATE-CHANGE ECOLOGYEnvironmental issues with coral reefsgeographic locationsScientific Reports
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Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon

2017

Abstract Ocean acidification may interfere with the calcifying physiology of marine bivalves. Therefore, understanding their capacity for acclimation and adaption to low pH over multiple generations is crucial to make predictions about the fate of this economically and ecologically important fauna in an acidifying ocean. Transgenerational exposure to an acidification scenario projected by the end of the century (i.e., pH 7.7) has been shown to confer resilience to juvenile offspring of the Manila clam, Ruditapes philippinarum. However, whether, and to what extent, this resilience can persist into adulthood are unknown and the mechanisms driving transgenerational acclimation remain poorly un…

0106 biological sciencesEnvironmental Engineering010504 meteorology & atmospheric sciencesAcclimatizationRuditapesBiology01 natural sciencesAcclimatizationCondition indexTotal inorganic carbonDissolved organic carbonAnimalsEnvironmental ChemistryJuvenileSeawaterWaste Management and Disposal0105 earth and related environmental sciencesEcology010604 marine biology & hydrobiologyWater PollutionOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationPollutionCarbonBivalviaSeafoodSeawaterEnvironmental MonitoringScience of The Total Environment
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Colonization of flax roots and early physiological responses of flax cells inoculated with pathogenic and nonpathogenic strains of Fusarium oxysporum

2003

ABSTRACT Fusarium oxysporum includes nonpathogenic strains and pathogenic strains that can induce necrosis or tracheomycosis in plants. The objective of this study was to compare the abilities of a pathogenic strain (Foln3) and a nonpathogenic strain (Fo47) to colonize flax roots and to induce early physiological responses in flax cell culture suspensions. Both strains colonized the outer cortex of the root; however, plant defense reactions, i.e., the presence of wall appositions, osmiophilic material, and collapsed cells, were less frequent and less intense in a root colonized by Foln3 than by Fo47. Early physiological responses were measured in flax cell suspensions confronted with germin…

0106 biological sciencesFusariumCell Culture TechniquesFungus01 natural sciencesApplied Microbiology and BiotechnologyPlant RootsMicrobiologyConidium03 medical and health sciencesPlant MicrobiologyFusariumFlaxFusarium oxysporumExtracellularCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant Diseases[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcologybiologyInoculationfood and beveragesFungi imperfectiHydrogen PeroxideHydrogen-Ion Concentrationbiology.organism_classificationKinetics[SDV.EE] Life Sciences [q-bio]/Ecology environmentCell cultureREPONSE DE LA PLANTECalcium010606 plant biology & botanyFood ScienceBiotechnology
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Ocean acidification affects somatic and otolith growth relationship in fish: Evidence from an in situ study

2019

Ocean acidification (OA) may have varied effects on fish eco-physiological responses. Most OA studies have been carried out in laboratory conditions without considering the in situ p CO 2 /pH variability documented for many marine coastal ecosystems. Using a standard otolith ageing technique, we assessed how in situ ocean acidification (ambient, versus end-of-century CO 2 levels) can affect somatic and otolith growth, and their relationship in a coastal fish. Somatic and otolith growth rates of juveniles of the ocellated wrasse Symphodus ocellatus living off a Mediterranean CO 2 seep increased at the high- p CO 2 site. Also, we detected that slower-growing individuals living at ambient p C…

0106 biological sciencesIn situ010504 meteorology & atmospheric sciencesSomatic cellCoastal fishPCO2Marine BiologyBiology01 natural sciencesOtolithCoastal fishOtolithic MembranemedicineCO2 seepAnimalsSeawaterEcosystem0105 earth and related environmental sciencesOtolithvariability010604 marine biology & hydrobiologyOcean acidificationOcean acidificationCarbon DioxideHydrogen-Ion ConcentrationAgricultural and Biological Sciences (miscellaneous)Oceanographymedicine.anatomical_structureSomatic growthFish <Actinopterygii>sense organsGeneral Agricultural and Biological SciencesIn situ study
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Impact of sewage sludges on Medicago truncatula symbiotic proteome

2004

The effects of sewage sludges were investigated on the symbiotic interactions between the model plant Medicago truncatula and the arbuscular mycorrhizal fungus Glomus mosseae or the rhizobial bacteria Sinorhizobium meliloti. By comparison to a control sludge showing positive effects on plant growth and root symbioses, sludges enriched with polycylic aromatic hydrocarbons or heavy metals were deleterious. Symbiosis-related proteins were detected and identified by two-dimensional electrophoresis and matrix-assisted laser desorption ionization mass spectrometry, and image analysis was used to study the effects of sewage sludges on M. truncatula symbiotic proteome.

0106 biological sciencesProteomeSewagePlant ScienceHorticulture01 natural sciencesBiochemistryPeptide Mapping12. Responsible consumption03 medical and health sciencesSymbiosisMycorrhizaeBotanyMedicagoElectrophoresis Gel Two-DimensionalMycorrhizaSymbiosisMolecular BiologyGlomusComputingMilieux_MISCELLANEOUS[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy030304 developmental biologyPlant Proteins0303 health sciencesSinorhizobium melilotibiologySewagebusiness.industryfungifood and beveragesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classification6. Clean waterMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationProteomebusinessSludge010606 plant biology & botanySinorhizobium meliloti
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Ocean acidification does not impair predator recognition but increases juvenile growth in a temperate wrasse off CO2seeps

2017

8 pages, 4 figures, supplementary data https://doi.org/10.1016/j.marenvres.2017.10.013

0106 biological sciencesSettore BIO/07 - EcologiaCO2 ventsCO2ventEffects-fishAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesPredationStress PhysiologicalmedicineMediterranean SeaJuvenileSeawaterPerciformePredatorGlobal changeOtolithRisk assessmentSymphodus ocellatusSettlementbiologyEcologypHAnimalSymphodus ocellatus010604 marine biology & hydrobiologyOcean acidificationGeneral MedicineJuvenile fishCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationPollutionmedicine.anatomical_structureCarbon dioxideWrassePredatory BehaviorSymphodus ocellatuEnvironmental Monitoring
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Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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Resistance of seagrass habitats to ocean acidification via altered interactions in a tri-trophic chain

2020

Despite the wide knowledge about prevalent effects of ocean acidification on single species, the consequences on species interactions that may promote or prevent habitat shifts are still poorly understood. Using natural CO2 vents, we investigated changes in a key tri-trophic chain embedded within all its natural complexity in seagrass systems. We found that seagrass habitats remain stable at vents despite the changes in their tri-trophic components. Under high pCO2, the feeding of a key herbivore (sea urchin) on a less palatable seagrass and its associated epiphytes decreased, whereas the feeding on higher-palatable green algae increased. We also observed a doubled density of a predatory wr…

0106 biological sciencesSettore BIO/07 - EcologiaStable isotope analysis010504 meteorology & atmospheric sciencesEcosystem ecologyOceans and Seaslcsh:Medicineocean acidification010603 evolutionary biology01 natural sciencesArticlePredationEnvironmental impactHydrothermal Ventsstable isotopeAnimalsEcosystemSeawater14. Life underwaterHerbivorylcsh:ScienceEcosystem0105 earth and related environmental sciencesTrophic levelCO2 ventMarine biologyHerbivoreMultidisciplinaryAlismatalesbiologyfood webEcologyClimate-change ecologyfungilcsh:RFishesOcean acidification15. Life on landHydrogen-Ion Concentrationbiology.organism_classificationSeagrassHabitat destructionHabitat13. Climate actionSea UrchinsEnvironmental sciencelcsh:Q
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The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells

2002

Summary A cDNA encoding a protein, NtrbohD, located on the plasma membrane and homologue to the flavocytochrome of the neutrophil NADPH oxidase, was cloned in tobacco. The corresponding mRNA was accumulated when tobacco leaves and cells were treated with the fungal elicitor cryptogein. After elicitation with cryptogein, tobacco cells transformed with antisense constructs of NtrbohD showed the same extracellular alkalinization as the control, but no longer produced active oxygen species (AOS). This work represents the first demonstration of the function of a homologue of gp91–phox in AOS production in elicited tobacco cells.

0106 biological sciencesTime FactorsNicotiana tabacumMolecular Sequence DataPlant ScienceBiologyGenes Plant01 natural sciencesFungal Proteins[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsComplementary DNATobaccoGene expressionGeneticsExtracellularAOSAmino Acid SequenceRNA MessengerCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesOxidase testNADPH oxidaseGene Expression ProfilingAlgal ProteinsCell MembraneHydrogen PeroxideCell BiologyHydrogen-Ion ConcentrationPlants Genetically Modifiedbiology.organism_classification3. Good healthElicitorCell biologyPlant LeavesProtein TransportBiochemistryCell culturebiology.proteinOxidoreductasesReactive Oxygen Species010606 plant biology & botany
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