Search results for "Hydrogen-ion concentration"

showing 10 items of 769 documents

d-Alanyl-d-Alanine Carboxypeptidase in the Bacterial Form and L-Form of Proteus mirabilis

1975

Membranes of the bacterial form and the stable and unstable L-forms of Proteus mirabilis contain LD and DD-carboxypeptidase. The DD-carboxypeptidase is inhibited non-competitively by penicillin G. The enzyme of the bacterial form is highly penicillin-sensitive (Ki - 4 X 10(-9) M penicillin G). Inhibition is only partly reversible by treatment with penicillinase or by dialysis against buffer. In contrast, the DD-carboxypeptidase of the unstable L-form, grown in the presence of penicillin, is 175-fold less penicillin-sensitive (Ki = 7 X 10(7) M penicillin G). Inhibition is completely reversed by penicillinase or dialysis. After inhibition by penicillin and subsequent reactivation the penicill…

D-Amino-Acid OxidaseDetergentsPenicillin sensitivityL FormsCarboxypeptidasesSpheroplastsBiochemistryDD PeptidaseCell wallpolycyclic compoundsmedicineProteus mirabilischemistry.chemical_classificationAlaninebiologyProtoplastsCell MembranePenicillin GHydrogen-Ion Concentrationbiology.organism_classificationProteus mirabilisPenicillinKineticsMembraneEnzymechemistryBiochemistryPenicillin VPenicillin bindingmedicine.drugEuropean Journal of Biochemistry
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Spatial and temporal dynamics of bacterioplankton community composition in a subtropical dammed karst river of southwestern China.

2018

Abstract River damming influences the hydro‐physicochemical variations in karst water; however, such disruption in bacterioplankton communities has seldom been studied. Here, three sampling sites (city‐river section, reservoir area, and outflow area) of the Ca2+–Mg2+–HCO 3 −–SO 4 2− water type in the dammed Liu River were selected to investigate the bacterioplankton community composition as identified by high‐throughput 16S rRNA gene sequencing. In the dammed Liu River, thermal regimes have been altered, which has resulted in considerable spatial‐temporal differences in total dissolved solids (TDSs), oxidation‐reduction potential (Eh), dissolved oxygen (DO), and pH and in a different microe…

DNA BacterialChinaBiodiversitylcsh:QR1-502MicrobiologyDNA Ribosomallcsh:MicrobiologyActinobacteriaSpatio-Temporal AnalysisRiversRNA Ribosomal 16Shydro‐physicochemical variabilitybacterioplankton communityCluster AnalysisMagnesium16S rRNANitrogen cyclePhylogenygeographygeography.geographical_feature_categorybiologyBacteriaEcologySulfatesMicrobiotaBacteroidetesBacterioplanktonSequence Analysis DNAOriginal ArticlesHydrogen-Ion Concentrationbiology.organism_classificationKarstPlanktonOxygenBicarbonatesEnvironmental scienceCalciumOriginal ArticleProchlorococcusProteobacteriadammed karst riverMicrobiologyOpen
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Characterization of Different Deoxyribonucleases in Human Lymphocytes

1975

Abstract Deoxyribonucleases, Disc Electrophoresis, Lymphocytes Four groups of deoxyribonuclease activities from human lymphocytes have been characterized by deoxyribonuclease assay in DNA-containing polyacrylamide gels following their separation by disc-electrophoresis. All activities hydrolyse DNA endonucleolytically. One neutral deoxyribo­ nuclease found in the cytoplasmic fraction prefers native or UV-irradiated DNA over denatured DNA as substrate and is a 5′-monoester former. Two groups of acid deoxyribonuclease activities are detectable in the nuclear fraction. Both are 3′-monoester formers. One is as well active with denatured DNA as with native DNA, the other one shows the same activ…

DNA BacterialCytoplasmUltraviolet RaysPolyacrylamideNucleic Acid DenaturationGeneral Biochemistry Genetics and Molecular Biologychemistry.chemical_compoundHydrolysismedicineHumansLymphocytesCell NucleusDeoxyribonucleasesSubstrate (chemistry)DeoxyribonucleaseDNAHydrogen-Ion ConcentrationElectrophoresis DiscRadiation Effectsmedicine.anatomical_structurechemistryBiochemistryCytoplasmDeoxyribonucleasesNucleusDNAZeitschrift für Naturforschung C
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Lactobacillus aquaticus sp. nov., isolated from a Korean freshwater pond.

2009

A Lactobacillus strain, IMCC1736T, was isolated recently from a Korean freshwater pond following an extensive study of the microbial community in this ecosystem. Its 16S rRNA gene was sequenced and phylogenetic analysis placed this strain within the Lactobacillus salivarius group, closely related to Lactobacillus satsumensis NRIC 0604T, with 97.9% sequence similarity. In the present work, the taxonomic status of strain IMCC1736T has been re-evaluated. It was characterized phylogenetically, genotypically and phenotypically and, based on DNA-DNA hybridization values, this strain represents a novel Lactobacillus species. Strain IMCC1736T can be differentiated genotypically from its closest rel…

DNA BacterialGenotypeSequence analysisMolecular Sequence DataFresh WaterBiologySodium ChlorideMicrobiologyDNA RibosomalMicrobiologyRibotypingPhylogeneticsLactobacillusRNA Ribosomal 16SCluster AnalysisEcology Evolution Behavior and SystematicsPhylogenyKoreaLactobacillus salivariusfood and beveragesNucleic Acid HybridizationGeneral MedicineSequence Analysis DNARibosomal RNAHydrogen-Ion Concentration16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueLactobacillusFermentationCarbohydrate MetabolismBacteriaLocomotionInternational journal of systematic and evolutionary microbiology
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Use of nodulation pattern, stress tolerance, nodC gene amplification, RAPD-PCR and RFLP-16S rDNA analysis to discriminate genotypes of Rhizobium legu…

2005

Twenty-seven new Rhizobium isolates were obtained from root nodules of wild and crop legumes belonging to the genera Vicia, Lathyrus and Pisum from different agroecological areas in central and southern Italy. A polyphasic approach including phenotypic and genotypic techniques was used to study their diversity and their relationships with other biovars and species of rhizobia. Analysis of symbiotic properties and stress tolerance tests revealed that wild isolates, showed a wide spectrum of nodulation and a marked variation in stress tolerance compared with reference strains tested in this study. All rhizobial isolates (except for the isolate CG4 from Galega officinalis) were presumptively i…

DNA BacterialRoot noduleGenotypeStress toleranceBiologymedicine.disease_causeN-AcetylglucosaminyltransferasesApplied Microbiology and BiotechnologyMicrobiologyDNA RibosomalPolymerase Chain ReactionMediterranean areaRhizobium leguminosarumRhizobiaBacterial ProteinsRhizobium leguninosarumNodC geneStress toleranceWild legumesStrains diversityMediterranean areaSymbiotic characteristicsRNA Ribosomal 16SmedicineSymbiosisEcology Evolution Behavior and SystematicsGeneticsPrincipal Component AnalysisRhizobium leguminosarumfood and beveragesFabaceaeNucleic acid amplification techniqueNodC geneHydrogen-Ion ConcentrationRhizobium leguninosarum16S ribosomal RNAbiology.organism_classificationStrains diversitySymbiotic characteristicsRAPDBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueRhizobiumWild legumeRestriction fragment length polymorphismNucleic Acid Amplification TechniquesPolymorphism Restriction Fragment LengthSettore AGR/16 - Microbiologia Agraria
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Arbutin synthase, a novel member of the NRD1β glycosyltransferase family, is a unique multifunctional enzyme converting various natural products and …

2002

Plant glucosyltransferases (GTs) play a crucial role in natural product biosynthesis and metabolization of xenobiotics. We expressed the arbutin synthase (AS) cDNA from Rauvolfia serpentina cell suspension cultures in Escherichia coli with a 6 x His tag and purified the active enzyme to homogeneity. The recombinant enzyme had a temperature optimum of 50 degrees C and showed two different pH optima (4.5 and 6.8 or 7.5, depending on the buffer). Out of 74 natural and synthetic phenols and two cinnamyl alcohols tested as substrates for the AS, 45 were accepted, covering a broad range of structural features. Converting rates comparable to hydroquinone were not achieved. In contrast to this broa…

DNA ComplementaryStereochemistryMolecular Sequence DataClinical BiochemistryPharmaceutical ScienceBiochemistryRauwolfiaSubstrate SpecificityXenobioticschemistry.chemical_compoundGlucosyltransferasesBiosynthesisMultienzyme ComplexesDrug DiscoveryGlycosyltransferaseGlycosylAmino Acid SequenceCloning MolecularMolecular BiologyPhylogenychemistry.chemical_classificationBiological ProductsBase SequenceSequence Homology Amino AcidbiologyOrganic ChemistryArbutinArbutinTemperatureGlycosyltransferasesSubstrate (chemistry)Hydrogen-Ion ConcentrationRecombinant ProteinsKineticsEnzymeBiochemistrychemistrybiology.proteinMolecular MedicineGlucosyltransferaseSequence AlignmentBioorganic & Medicinal Chemistry
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Supported liquid membrane extraction with single hollow fiber for the analysis of fluoroquinolones from environmental surface water samples

2010

Abstract In this work, the simple analytical method for the determination of four fluoroquinolone antibiotics: ciprofloxacin, enrofloxacin, norfloxacin and danofloxacin, in environmental surface water samples is described. Sample pretreatment step was performed by the application of a technique based on supported liquid membrane extraction with the configuration of single hollow fiber (HF-SLM). The HPLC system with diode array detection was used for final analysis of studied analytes. Various parameters affecting the extraction efficiency during HF-SLM enrichment, such as type of membrane diluent, pH of donor (sample) and acceptor phases, as well as an enrichment time and salt content of sa…

DanofloxacinAnalytical chemistrySodium ChlorideBiochemistryHigh-performance liquid chromatographyDiluentSensitivity and SpecificityAnalytical ChemistryRiversmedicinehollow fiberenvironmental samplesSample preparationfluoroquinolonesChromatography High Pressure LiquidDetection limitChromatographysample preparationChemistryOrganic ChemistryExtraction (chemistry)Reproducibility of ResultsMembranes ArtificialGeneral MedicineHydrogen-Ion ConcentrationAnti-Bacterial Agentssupported liquid membrane extractionWater treatmentHydrochloric AcidEnrichment factorWater Pollutants Chemicalmedicine.drugJournal of Chromatography A
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Tuning the pH-Switch of Supramolecular Polymer Carriers for siRNA to Physiologically Relevant pH

2017

The preparation of histidine enriched dendritic peptide amphiphiles and their self-assembly into multicomponent pH-switchable supramolecular polymers is reported. Alternating histidine and phenylalanine peptide synthons allow the assembly/disassembly to be adjusted in a physiologically relevant range of pH 5.3-6.0. Coassembly of monomers equipped with dendritic tetraethylene glycol chains with monomers bearing peripheral primary amine groups leads to nanorods with a tunable cationic surface charge density. These surface functional supramolecular polycations are able to reversibly bind short interfering RNA (siRNA). The nanorod-like supramolecular polymers, their complexation with siRNA, and…

DendrimersCircular dichroismPolymers and PlasticsStereochemistryPhenylalanineStatic ElectricitySupramolecular chemistryBioengineeringPeptide02 engineering and technology010402 general chemistry01 natural sciencesPolyethylene GlycolsBiomaterialschemistry.chemical_compoundCationsAmphiphileMaterials ChemistryHistidineRNA Small Interferingchemistry.chemical_classificationDrug CarriersNanotubesGene Transfer Techniquestechnology industry and agricultureCationic polymerizationHydrogen-Ion Concentration021001 nanoscience & nanotechnologyCombinatorial chemistry0104 chemical sciencesSupramolecular polymersMonomerchemistrySelf-assemblyPeptides0210 nano-technologyBiotechnology
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Insights into the effect of soil pH on N(2)O and N(2) emissions and denitrifier community size and activity.

2010

ABSTRACT The objective of this study was to investigate how changes in soil pH affect the N 2 O and N 2 emissions, denitrification activity, and size of a denitrifier community. We established a field experiment, situated in a grassland area, which consisted of three treatments which were repeatedly amended with a KOH solution (alkaline soil), an H 2 SO 4 solution (acidic soil), or water (natural pH soil) over 10 months. At the site, we determined field N 2 O and N 2 emissions using the 15 N gas flux method and collected soil samples for the measurement of potential denitrification activity and quantification of the size of the denitrifying community by quantitative PCR of the narG , napA ,…

DenitrificationSoil testNitrogenNitrous OxideNITROUS-OXIDE EMISSIONSDINITROGENNITRIFICATIONApplied Microbiology and BiotechnologyDNA RibosomalMicrobial EcologyDenitrifying bacteriaSoilSoil pHRNA Ribosomal 16SNitrogen cycleNitritesSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environmentEcologyNitrogen IsotopesChemistrySoil classificationBiodiversityHydrogen-Ion ConcentrationAgronomySoil waterMetagenomeABUNDANCESoil microbiologyNITRATEFood ScienceBiotechnologyApplied and environmental microbiology
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Dynamic chemical devices: photoinduced electron transfer and its ion-triggered switching in nanomechanical butterfly-type bis(porphyrin)terpyridines.

2005

A series of butterfly-type molecular constructs has been prepared in good yield by using a double Stille coupling synthetic protocol. They are composed of a terpyridine (terpy) scaffold and two wings composed of appended porphyrins that are capable of switching from an extended W geometry to a compact U geometry upon cation coordination of the terpy unit. The porphyrin moieties exist in the constructs either as free bases or they can be sequentially metallated, thus giving rise to wings of different "colours". Stationary and time-resolved emission studies of the HZn, ZnAu and Zn2Au constructs show that the electronic properties are strongly dependent on the geometry. In the extended W confo…

DenticityMagnetic Resonance SpectroscopyPorphyrinsChemical PhenomenaPhotochemistryPyridinesMolecular ConformationElectronsPhotochemistryCrystallography X-RayLigandsCatalysisPhotoinduced electron transferchemistry.chemical_compoundElectron transferLigandHydrogen bondChemistry PhysicalOrganic ChemistryTemperatureGeneral ChemistryHydrogen-Ion ConcentrationPorphyrinZincSpectrometry FluorescencechemistryExcited stateSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationIndicators and ReagentsSpectrophotometry UltravioletTerpyridineChemistry (Weinheim an der Bergstrasse, Germany)
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