Search results for "INC"

showing 10 items of 18434 documents

Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Genetic correlation between resistance to oxidative stress and reproductive life span in a bird species.

2010

Evolutionary theories propose that aging is the result of a trade-off between self-maintenance and reproduction, and oxidative stress may play a crucial role in such a trade-off. Phenotypic manipulations have revealed that a high investment in reproduction leads to a decline in the organism's resistance to oxidative stress, which could in turn accelerate aging. Here, by using quantitative genetic analyses as a tool to disentangle genetic effects from phenotypic variances, the relationship between resistance to oxidative stress at sexual maturity and two key reproductive life-history traits (i.e., number of breeding events during life and age at last reproduction) was analyzed in cross-foste…

0106 biological sciencesMalequantitative geneticsQuantitative geneticsDisposable-somaFree radicalsmedicine.disease_cause01 natural sciencesreactive oxygen species.PleiotropySexual maturityOrganismmedia_commonGeneticsreactive oxygen species[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesReproductionBiological Evolution3. Good healthFemaleReproductionGeneral Agricultural and Biological Sciencesmedia_common.quotation_subjectLongevityfree radicalsBiology010603 evolutionary biologyGenetic correlation[ SDV.EE ] Life Sciences [q-bio]/Ecology environment03 medical and health sciencespleiotropyGeneticsmedicineLife-historyAnimalsEcology Evolution Behavior and SystematicsGenetic Association Studies030304 developmental biologyPleiotropy[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyModels Geneticlife-historyQuantitative geneticsHeritabilityOxidative StressFinches[SDE.BE]Environmental Sciences/Biodiversity and EcologyReactive oxygen speciesOxidative stress
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Moving Toward a Strategy for Addressing Climate Displacement of Marine Resources: A Proof-of-Concept

2020

Realistic predictions of climate change effects on natural resources are central to adaptation policies that try to reduce these impacts. However, most current forecasting approaches do not incorporate species-specific, process-based biological information, which limits their ability to inform actionable strategies. Mechanistic approaches, incorporating quantitative information on functional traits, can potentially predict species- and population-specific responses that result from the cumulative impacts of small-scale processes acting at the organismal level, and can be used to infer population-level dynamics and inform natural resources management. Here we present a proof-of-concept study…

0106 biological sciencesMarine conservationSettore BIO/07 - Ecologia010504 meteorology & atmospheric scienceslcsh:QH1-199.5Engraulis encrasicolusProcess (engineering)Computer scienceClimate changeOcean EngineeringAquatic Sciencelcsh:General. Including nature conservation geographical distributionclimate-informed management; Dynamic Energy Budget model; Engraulis encrasicolus; life-history traits; scenarios; temperature increaseOceanography01 natural sciencesEnvironmental dataDynamic Energy Budget model14. Life underwaterNatural resource managementlcsh:Scienceclimate-informed management0105 earth and related environmental sciencesWater Science and TechnologyGlobal and Planetary Changebusiness.industry010604 marine biology & hydrobiologyEnvironmental resource managementscenariosNatural resourcelife-history traitsAdaptive management13. Climate actionSettore BIO/03 - Botanica Ambientale E Applicatatemperature increaselcsh:QFisheries managementbusiness
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High-pressure processing of meat and meat products

2016

International audience; High pressure (HP) was first introduced at the end of the nineteenth century in the field of materials chemistry. The first application of high pressure in the food industry was proposed by Hite in 1899 to pasteurize milk and fruit products. The high hydrostatic pressure (HHP) treatment is considered as a nonthermal process, alternative to heat treatments, as it enables inactivation of pathogenic and spoilage microorganisms in foods. This technology is based on two principles that determine the behavior of foods under pressure. The first is an important principle that underlies the effects on reaction equilibria is known as the principle of Le Chatelier, and the seco…

0106 biological sciencesMaterials scienceHigh-pressure preservationFood industryWhite meatHydrostatic pressurePasteurization01 natural sciencesFood safetylaw.inventionLe Chatelier's principlePascalization0404 agricultural biotechnologylaw010608 biotechnologyMeat spoilage[SDV.IDA]Life Sciences [q-bio]/Food engineeringHigh-pressure processingPrinciple of Le ChatelierFood sciencebusiness.industry[ SDV.IDA ] Life Sciences [q-bio]/Food engineering04 agricultural and veterinary sciencesSterilization (microbiology)Meat preservation040401 food sciencePressure-assisted thermal sterilizationPasteurizationbusinessIsostatic principle
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Staying alive on an active volcano: 80 years population dynamics of Cytisus aeolicus (Fabaceae) from Stromboli (Aeolian Islands, Italy)

2020

Abstract Cytisus aeolicus is a narrow endemic species restricted to the Aeolian archipelago (SE Tyrrhenian Sea, Italy) and it is one of the most evolutionarily isolated plants in the Mediterranean flora. Historical and literature data suggest that both metapopulations and isolated individuals of C. aeolicus are gradually shrinking. Field investigations and drone images demonstrate that the C. aeolicus metapopulation from Stromboli experienced a strikingly fast increase during the last decades. As of 2019, more than 7000 ± 3000 mature individuals occur on Stromboli, i.e. 14 to 20 times more than those counted during the last census, 25 years ago. The diachronic analysis of aerial photos conc…

0106 biological sciencesMediterranean climateIUCN risk assessmentPopulationMetapopulationConservation010502 geochemistry & geophysics010603 evolutionary biology01 natural sciencesConservation Endemic species Pollen morphology Germination rate Growth rate IUCN risk assessmentlcsh:QH540-549.5IUCN Red ListEndemismeducation0105 earth and related environmental scienceseducation.field_of_studygeography.geographical_feature_categoryExtinctionGrowth rateEcologyconservation; endemic species; germination rate; growth rate; IUCN risk assessment; pollen morphologyEcologyEcological ModelingStrombolian eruptionGermination ratePollen morphologyGeographyVolcanoSettore BIO/03 - Botanica Ambientale E ApplicataEndemic specieslcsh:Ecology
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Recreational and small-scale fisheries may pose a threat to vulnerable species in coastal and offshore waters of the western Mediterranean

2019

10 pages, 3 figures, supplementary material https://doi.org/10.1093/icesjms/fsz071

0106 biological sciencesMediterranean climateSmall-scale fishers (SSF)Target and by-catch[SDE.MCG]Environmental Sciences/Global Changesrecreational and small-scale fishingAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesAUTfisheries management marine protected areas recreational fisheries (RF) small-scale fisheries (SSF) target and bycatch threatened speciesMarine protected areasVulnerable species14. Life underwaterRecreationfishing pressureEcology Evolution Behavior and Systematicsfishing impacts on vulnerable speciesEcology010604 marine biology & hydrobiologyExtinction[SDE.ES]Environmental Sciences/Environmental and SocietyManagementFisheryGeographyScale (social sciences)[SDE]Environmental SciencesCoastal and offshore fisheriesMarine protected areaSubmarine pipeline[SDE.BE]Environmental Sciences/Biodiversity and EcologyFishing methodswestern mediterranean
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Measuring the effects of temperature rise on Mediterranean shellfish aquaculture

2018

Abstract Shellfish aquaculture represents a worldwide valuable segment of the aquaculture market, spreading along the Mediterranean coasts, and is sensitive to the still unforeseen, poorly-known effects of climate change. Threats due to temperature rise can threaten the deployment and development of this sector, up until now recognised as the best candidate to mitigate the effects of fishery overexploitation. Here, we investigate the effects of temperature increase on the model species, Mytilus galloprovincialis, measuring outcomes from valve fragility (thickness) and condition index. Evidence of a reduction in the thickness of valves and the modulation condition of the mussels along with t…

0106 biological sciencesMediterranean climateThickneSettore BIO/07 - Ecologia010504 meteorology & atmospheric sciencesGeneral Decision SciencesClimate changeAquaculture01 natural sciencesMesocosmCondition indexTemperature increaseAquacultureEffects of global warmingClimate changeBaseline (configuration management)Ecology Evolution Behavior and Systematics0105 earth and related environmental sciencesShellfishEcologybusiness.industry010604 marine biology & hydrobiologyEcology Evolution Behavior and SystematicFisheryBody ConditionOverexploitationDecision Sciences (all)Environmental sciencebusiness
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Analysis of trematode parasite communities in fish eye lenses by pyrosequencing of naturally pooled DNA.

2011

Infections by multiple parasite species are common in nature and have important consequences for between species interactions and coevolutionary dynamics with the host populations. For example ecological and evolutionary factors underlying the structure of parasite communities determine the range of hosts a parasite can infect and set the basis for both evolution of host defences and parasite virulence as well as management of diseases. Studies investigating these factors have been facilitated in the recent past by genetic methods which surmount difficulties of traditional morphological taxonomy in identifying individual parasite species. Here we take a step further and present a novel meth…

0106 biological sciencesMicrobiology (medical)Molecular Sequence DataSnailsZoologyVirulenceTrematode Infections010603 evolutionary biology01 natural sciencesMicrobiologyPolymorphism Single NucleotideHost Specificity03 medical and health sciencesCharadriiformesFish DiseasesReference ValuesDNA Ribosomal SpacerGeneticsParasite hostingAnimals14. Life underwaterMolecular BiologyEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesPrincipal Component AnalysisCommunitybiologyModels Geneticta1183Community structureInterspecific competitionSequence Analysis DNAbiology.organism_classification3. Good healthInfectious DiseasesFreshwater fishPyrosequencingta1181Taxonomy (biology)TrematodaInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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Resistance of a recombinant Escherichia coli to dehydration.

2009

International audience; Dehydration of microorganisms, rendering them anhydrobiotic, is often an efficient method for the short and long term conservation of different strain-producers. However, some biotechnologically important recombinant bacterial strains are extremely sensitive to conventional treatment. We describe appropriate conditions during dehydration of the recombinant Escherichia coli strain HB 101 (GAPDH) that can result dry cells having a 88% viability on rehydration. The methods entails air-drying after addition of 100 mM trehalose to the cultivation medium or distilled water (for short term incubation).

0106 biological sciencesMicroorganismPreservation BiologicalBiologymedicine.disease_cause01 natural scienceslaw.inventionRecombinant strain03 medical and health scienceschemistry.chemical_compoundlaw010608 biotechnologymedicineEscherichia coli[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringDehydrationDesiccationCryptobiosisIncubationEscherichia coli030304 developmental biologyRecombination Genetic0303 health sciencesMicrobial ViabilityDehydrationTrehaloseCell BiologyGeneral MedicineRehydrationmedicine.diseaseAnhydrobiosisTrehaloseCell resistanceDistilled waterBiochemistrychemistryRecombinant DNACell biology international
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Dwarf shrub vegetation of rock ledges and clefts in the Pamir Alai Mountains (Middle Asia: Tajikistan)

2016

AbstractThe paper presents the results of phytosociological researches on rocky slope vegetation in Tajikistan with the aim to establish a comprehensive syntaxonomical classification system. Field studies were conducted in 2010-2014 in Pamir Alai ranges and Pamirian plateau. Nearly 500 relevés documenting rock and scree vegetation were made according to the Braun-Blanquet method. Numerical analyses of selected 58 relevés representing dwarf shrub vegetation on rock ledges made it possible to distinguish: Ephedro glaucae- Spiraeion baldschuanicae and Ephedrion regeliano-fedtschenkoi alliances, as well as Spiraeetum baldschuanicae, Rhamnetum coriaceae, Pentaphylloidetum parvifoliae and Pentaph…

0106 biological sciencesMiddle asiaved/biology.organism_classification_rank.speciesalpine vegetationchasmophytesPlant Science010603 evolutionary biology01 natural sciencesShrubScreesyntaxonomyEcology Evolution Behavior and SystematicsPlateaugeography.geographical_feature_categoryved/biologyEcologyElevationPlant communityVegetationPhysiognomyGeographyalpine vegetation; Campanuletalia incanescentis; chasmophytes; saxicolous communities; syntaxonomyCampanuletalia incanescentissaxicolous communities010606 plant biology & botanyActa Botanica Croatica
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