Search results for "ISUM"

showing 10 items of 200 documents

Seawater carbonate chemistry and fish communities properties off CO2 seeps in Japan

2020

Ocean acidification will likely change the structure and function of coastal marine ecosystems over coming decades. Volcanic carbon dioxide seeps generate dissolved CO2 and pH gradients that provide realistic insights into the direction and magnitude of these changes. Here, we used fish and benthic community surveys to assess the spatio-temporal dynamics of fish community properties off CO2 seeps in Japan. Adding to previous evidence from ocean acidification ecosystem studies conducted elsewhere, our findings documented shifts from calcified to non-calcified habitats with reduced benthic complexity. In addition, we found that such habitat transition led to decreased diversity of associated …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityCanopy heightCommunity composition and diversityCoverage standard deviationinorganicAlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateNorth PacificAlkalinity totaltotalCO2 ventReplicatespHPelagosTemperaturedissolvedCanopy height standard deviationCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Fish standard deviationTemperature water standard deviationEarth System Researchstandard deviationField observationgeographic locationsPotentiometric titrationCoverageCalcite saturation stateLocationPotentiometricwaterPartial pressure of carbon dioxideSiteRocky-shore communityBenthosSpecies richness standard deviationSalinity standard deviationOcean Acidification International Coordination Centre OA ICCBiotic Habitat Profile ratioTypeBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)Calculated using CO2SYSfungiPartial pressure of carbon dioxide standard deviationCarbonate system computation flagpH standard deviationFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonPartial pressure of carbon dioxide water at sea surface temperature wet airFishTransectCarbon dioxideRocky shore communityEntire communityBiotic Habitat Profile ratio standard deviationFugacity of carbon dioxide water at sea surface temperature wet airSeasonCoast and continental shelfSpecies richness
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Macroalgal responses to ocean acidification depend on nutrient and light levels

2015

Ocean acidification may benefit algae that are able to capitalize on increased carbon availability for photosynthesis, but it is expected to have adverse effects on calcified algae through dissolution. Shifts in dominance between primary producers will have knock-on effects on marine ecosystems and will likely vary regionally, depending on factors such as irradiance (light vs. shade) and nutrient levels (oligotrophic vs. eutrophic). Thus experiments are needed to evaluate interactive effects of combined stressors in the field. In this study, we investigated the physiological responses of macroalgae near a CO2 seep in oligotrophic waters off Vulcano (Italy). The algae were incubated in situ …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityChlorophyll aFucoxanthininorganicAlkalinityPhotosynthetic efficiency standard errorChlorophyll cNitrogen content per dry mass standard errorLight saturation point standard errorPhenolics allTemperature waterCarbon inorganic dissolvedMacroalgaeCalculated using seacarb after Nisumaa et al 2010Carbon Nitrogen ratioAragonite saturation stateAlkalinity totalallCarbon per dry massSalinity standard errortotalCarbon content per dry mass standard errorPhenolics all standard errorCO2 ventChromistapHMaximum photochemical quantum yield of photosystem II standard errorTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedAntioxidant activity standard errorCarbonate ionMaximum photochemical quantum yield of photosystem IIPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Field experimentstandard errorNitrogen content per dry massElectron transport rate standard errorFucoxanthin standard errorEarth System ResearchViolaxanthinPhenolicsChlorophyll a standard errorCarbon dioxide standard errorPotentiometric titrationCalcite saturation stateCarbon/Nitrogen ratio standard errorNitrogenOchrophytaPotentiometricper dry masswaterChlorophyll c standard errorBenthosAlkalinity total standard errorAntioxidant activityElectron transport rateLight saturation pointOcean Acidification International Coordination Centre OA ICCMacro-nutrientsMediterranean SeaNitrogen per dry massBicarbonate ionTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciespH standard errorCalcite saturation state standard errorCystoseira compressaCalculated using CO2SYSNon photochemical quenchingCarbon content per dry massCarbonate system computation flagViolaxanthin standard errorPrimary production/PhotosynthesisFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonCarbon/Nitrogen ratioBiomass/Abundance/Elemental compositionTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airAragonite saturation state standard errorCarbon dioxideMacro nutrientsCarbonate ion standard errorSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airPadina pavonicaBiomass Abundance Elemental compositionCoast and continental shelfPhotosynthetic efficiencyBicarbonate ion standard errorNon photochemical quenching standard error
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Seagrass ecosystem response to long-term high CO2 in a Mediterranean volcanic vent

2014

We examined the long-term effect of naturally acidified water on a Cymodocea nodosa meadow growing at a shallow volcanic CO2 vent in Vulcano Island (Italy). Seagrass and adjacent unvegetated habitats growing at a low pH station (pH = 7.65 ± 0.02) were compared with corresponding habitats at a control station (pH = 8.01 ± 0.01). Density and biomass showed a clear decreasing trend at the low pH station and the below- to above-ground biomass ratio was more than 10 times lower compared to the control. C content and delta 13C of leaves and epiphytes were significantly lower at the low pH station. Photosynthetic activity of C. nodosa was stimulated by low pH as seen by the significant increase in…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityChlorophyll ainorganicAlkalinityLight saturation point standard errorPhotosynthetic quantum efficiencyMediterranean Sea Acidification in a Changing Climate MedSeATemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010IrradianceRespiration rate carbonAragonite saturation stateBiomassAlkalinity totalIrradiance standard errortotalCO2 ventCymodocea nodosapHRespirationEpiphytes loadMaximum photochemical quantum yield of photosystem II standard errorNet community production of carbonTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedRespiration rate carbon standard errorCarbonate ionMaximum photochemical quantum yield of photosystem IIPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Net community production of carbon standard errorIlluminance standard errorSoft bottom communitystandard errorCarbon inorganic dissolved standard errorRespiration rateElectron transport rate standard errorEarth System Researchδ13CPhotosynthetic quantum efficiency standard errorField observationChlorophyll a standard errorGross primary production of carbonBiomass standard errorCalcium carbonatePotentiometric titrationCalcite saturation stateShoot densityPotentiometricwaterIlluminanceOxygen standard errorBenthosAlkalinity total standard errorMediterranean Sea Acidification in a Changing Climate (MedSeA)Electron transport rateLight saturation pointOcean Acidification International Coordination Centre OA ICCMediterranean SeaGross primary production of carbon standard errorBicarbonate ionSoft-bottom communityδ13C standard errorTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciespH standard errorCarbonate system computation flagloadPrimary production/PhotosynthesisFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonBiomass/Abundance/Elemental compositionTreatmentEpiphytes load standard errorOxygenPartial pressure of carbon dioxide water at sea surface temperature wet airEpiphytes loadCarbon dioxideCarbon standard errorEntire communityFugacity of carbon dioxide water at sea surface temperature wet airGroupBiomass Abundance Elemental compositionCoast and continental shelfEpiphytesShoot density standard errorCalcium carbonate standard error
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Seawater carbonate chemistry and coralline algal diversity

2021

Calcified coralline algae are ecologically important in rocky habitats in the marine photic zone worldwide and there is growing concern that ocean acidification will severely impact them. Laboratory studies of these algae in simulated ocean acidification conditions have revealed wide variability in growth, photosynthesis and calcification responses, making it difficult to assess their future biodiversity, abundance and contribution to ecosystem function. Here, we apply molecular systematic tools to assess the impact of natural gradients in seawater carbonate chemistry on the biodiversity of coralline algae in the Mediterranean and the NW Pacific, link this to their evolutionary history and …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityCommunity composition and diversityBicarbonate ion standard deviationinorganicAlkalinity total standard deviationAlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateNorth PacificMarine habitatAlkalinity totaltotalCO2 ventpHTemperaturedissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Calcium carbonate standard deviationstandard errorEarth System Researchstandard deviationField observationCalcium carbonateCoverageCalcite saturation stateLocationwaterPartial pressure of carbon dioxideSiteRocky-shore communityCalcium carbonate massAragonite saturation state standard deviationBenthosSalinity standard deviationOcean Acidification International Coordination Centre OA ICCMediterranean SeaCarbon inorganic dissolved standard deviationCalcite saturation state standard deviationTypeBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)Coverage standard errorfungiEvent labelPartial pressure of carbon dioxide standard deviationCarbonate system computation flagpH standard deviationCarbonate ion standard deviationFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideRocky shore communityEntire communityFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelfSpecies richness
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Decline in Coccolithophore Diversity and Impact on Coccolith Morphogenesis Along a Natural CO2 Gradient

2014

A natural pH gradient caused by marine CO2 seeps off Vulcano Island (Italy) was used to assess the effects of ocean acidification on coccolithophores, which are abundant planktonic unicellular calcifiers. Such seeps are used as natural laboratories to study the effects of ocean acidification on marine ecosystems, since they cause long-term changes in seawater carbonate chemistry and pH, exposing the organisms to elevated CO2 concentrations and therefore mimicking future scenarios. Previous work at CO2 seeps has focused exclusively on benthic organisms. Here we show progressive depletion of 27 coccolithophore species, in terms of cell concentrations and diversity, along a calcite saturation …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityCommunity composition and diversityinorganicAlkalinityCoccospheres malformedMediterranean Sea Acidification in a Changing Climate MedSeATemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateAlkalinity totaltotalCO2 ventpHPelagosTemperaturedissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Earth System ResearchmalformedField observationPotentiometric titrationCalcite saturation stateCoccospheresPotentiometricwaterGrowth MorphologyMediterranean Sea Acidification in a Changing Climate (MedSeA)Ocean Acidification International Coordination Centre OA ICCMediterranean SeaBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)Calculated using CO2SYSfungiCarbonate system computation flagCoccospheres corrodedFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonBiomass/Abundance/Elemental compositionPartial pressure of carbon dioxide water at sea surface temperature wet airSample IDCarbon dioxidecorrodedEntire communityGrowth/MorphologyPhytoplanktonFugacity of carbon dioxide water at sea surface temperature wet airBiomass Abundance Elemental compositionCoast and continental shelfNumber of species
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Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea Off vulcano, Italy

2014

The effects of increasing atmospheric CO(2) on ocean ecosystems are a major environmental concern, as rapid shoaling of the carbonate saturation horizon is exposing vast areas of marine sediments to corrosive waters worldwide. Natural CO(2) gradients off Vulcano, Italy, have revealed profound ecosystem changes along rocky shore habitats as carbonate saturation levels decrease, but no investigations have yet been made of the sedimentary habitat. Here, we sampled the upper 2 cm of volcanic sand in three zones, ambient (median pCO(2) 419 µatm, minimum Omega (arag) 3.77), moderately CO(2)-enriched (median pCO(2) 592 µatm, minimum Omega (arag) 2.96), and highly CO(2)-enriched (median pCO(2) 1611…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateSalinityPotentiometric titrationCalcite saturation stateCommunity composition and diversityPotentiometricinorganicwaterAlkalinitySiteFigureBenthosTemperature waterCarbon inorganic dissolvedAbundanceCalculated using seacarb after Nisumaa et al 2010Ocean Acidification International Coordination Centre OA ICCMediterranean SeaBicarbonate ionAragonite saturation stateSoft-bottom communityAlkalinity totalLONGITUDEtotalCalculated using seacarb after Nisumaa et al. (2010)CO2 ventSpeciesShannon Diversity IndexpHCalculated using CO2SYSTemperatureCarbonate system computation flagdissolvedFugacity of carbon dioxide (water) at sea surface temperature (wet air)Carbonate ionCarbonPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Partial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideSoft bottom communityEntire communityEarth System ResearchLATITUDEFugacity of carbon dioxide water at sea surface temperature wet airGroupCoast and continental shelfField observationClass
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Molecular Characterization of the Leucine Plasmid from Buchnera aphidicola , Primary Endosymbiont of the Aphid Acyrthosiphon pisum

2000

The complete sequence of the leucine plasmid of Buchnera aphidicola from the aphid Acyrthosiphon pisum (pLeu-BAp) is reported. Its gene organization was concordant with those of other leucine plasmids of Buchnera from aphids of the Aphidini and Macrosiphini tribes. Three inverted repeats are present in pLeu-BAp. Two of them are also present in pLeu from the family Aphididae: (i) SIR1, located downstream the leucine operon, resembles a rho-independent terminator of transcription, and (ii) LIR1, located upstream of the leucine operon, is suggested to be involved in transcription termination or messenger stability. The third, located near the putative ATGC repeats involved in the origin of rep…

OperonInverted repeatMolecular Sequence DataMinisatellite RepeatsBiologyOrigin of replicationApplied Microbiology and BiotechnologyMicrobiologyOpen Reading FramesPlasmidBuchneraLeucinePhylogeneticsAnimalsSymbiosisPhylogenyGeneticsBase Sequencefood and beveragesGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumTerminator (genetics)Genes BacterialAphidsBuchneraMicrosatellite RepeatsPlasmidsCurrent Microbiology
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Maternal genotype influences pea seed size by controlling both mitotic activity during early embryogenesis and final endoreduplication level/cotyledo…

2000

International audience

PISUM SATIVUM VAR ARVENSE[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsComputingMilieux_MISCELLANEOUS[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics
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Progress in the characterization of insulin-like peptides in aphids: Immunohistochemical mapping of ILP4.

2021

Aphids were the first animals described as photoperiodic due to their seasonal switch from viviparous parthenogenesis to sexual reproduction (cyclical parthenogenesis) caused by the shortening of the photoperiod in autumn. This switch produces a single sexual generation of oviparous females and males that mate and lay diapausing cold-resistant eggs that can overcome the unfavourable environmental conditions typical of winter in temperate regions. Previous studies have hinted at a possible implication of two insulin-like peptides (ILP1 and ILP4) in the aphid seasonal response, changing their expression levels between different photoperiodic conditions. Moreover, in situ localization of their…

PhotoperiodParthenogenesisDiapauseBiologyBiochemistry03 medical and health sciences0302 clinical medicineCircadian ClocksAnimalsInsulinReproductive systemMolecular Biology030304 developmental biology0303 health sciencesAphidReproductionNeuropeptidesfood and beveragesBrainParthenogenesisbiology.organism_classificationImmunohistochemistryDiapauseSexual reproductionAcyrthosiphon pisumCell biologyPyrrolidonecarboxylic AcidInsect ScienceAphidsInsect HormonesMegoura viciaeInsect ProteinsOviparityPeptidesOligopeptides030217 neurology & neurosurgeryInsect biochemistry and molecular biology
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Pisum sativum – Pseudomonas interactions : influence on iron nutrution, growth and immunity of the host plant

2020

The project aimed at making progress in the knowledge of the iron-mediated interactions between pea and fluorescent pseudomonads in order to promote the iron-nutrition and health of the host-plant. A bibliographical study was conducted to draw up the state of the art concerning the influence of rhizosphere microorganisms on plant iron status (Chapter 1).Pisum sativum has been chosen as an agronomic model-plant because of its high potential in agroecology and in Human nutrition related to its ability to fix atmospheric nitrogen and to the high amino-acids content of its seeds. However, this species suffers from a high susceptibility to iron deficiency as expressed by the well-known chlorosis…

Plant iron nutrition[SDE.BE] Environmental Sciences/Biodiversity and EcologyPseudomonasIronInteractions plante-MicroorganismesNutrition en fer de la plantePyoverdines[SDE.BE]Environmental Sciences/Biodiversity and EcologyPlant-Microorganisms interactionsPisum sativumFer
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