Search results for "Intermolecular"

showing 10 items of 396 documents

1-Methyl-4-nitraminopyridinium nitrate and 4-nitraminopyridinium methanesulfonate

2001

In the title compounds, C6H8N3O2+*NO3- and C5H6N3O2+*-CH3SO3-, respectively, the cations are almost planar; the twist of the nitramino group about the C-N and N-N bonds does not exceed 10 degrees. The deviations from coplanarity are accounted for by intermolecular N-H...O interactions. The coplanarity of the NHNO2 group and the phenyl ring leads to the deformation of the nitramino group. The C-N-N angle and one C-C-N angle at the junction of the phenyl ring and the nitramino group are increased from 120 degrees by ca 6 degrees, whereas the other junction C-C-N angle is decreased by ca 5 degrees. Within the nitro group, the O-N-O angle is increased by ca 5 degrees and one O-N-N angle is decr…

biologyHydrogen bondChemistryStereochemistryIntermolecular forceGeneral MedicineCrystal structureRing (chemistry)General Biochemistry Genetics and Molecular BiologyCrystallographychemistry.chemical_compoundSulfonateNitrobiology.proteinMoleculeOrganic anionActa Crystallographica Section C Crystal Structure Communications
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Synthesis, X-ray structure, Hirshfeld analysis, and DFT studies of a new Pd(II) complex with an anionic s-triazine NNO donor ligand

2020

Abstract A new Pd(II) complex, [Pd(Triaz)Cl], with the hydrazono-s-triazine ligand, 2,4-di-tert-butyl-6-((2-(4-morpholino-6-(phenylamino)-1,3,5-triazin-2-yl)hydrazono)methyl)phenol (HTriaz), was synthesized by the reaction of PdCl2 with the organic ligand (1:1) in acetone under isothermal conditions. The molecular structure of the [Pd(Triaz)Cl] complex was determined using FTIR and 1H NMR spectroscopic techniques, and single-crystal X-ray diffraction. Moreover, using Hirshfeld surface analysis, the percentages of the intermolecular interactions were determined. The obtained values were 60.6%, 11.6%, 8.1%, 3.6%, and 5.0% for the H⋯H, C⋯H, O⋯H, N⋯H, and Cl⋯H interactions, respectively. Among …

chemistry.chemical_classification010405 organic chemistryChemistryLigandOrganic ChemistryIntermolecular forceHydrazone010402 general chemistry01 natural sciences0104 chemical sciencesAnalytical ChemistryInorganic ChemistryCrystallographychemistry.chemical_compoundElectron transferProton NMRMoleculeSpectroscopyTriazineNatural bond orbitalJournal of Molecular Structure
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Concerted Halogen-Bonded Networks with N-Alkyl Ammonium Resorcinarene Bromides: From Dimeric Dumbbell to Capsular Architectures

2015

N-Alkyl ammonium resorcinarene bromides and 1,4-diiodooctafluorobutane via multiple intermolecular halogen bonds (XB) form different exotic supramolecular architectures through subtle changes of the upper rim substituents. Dimeric dumbbell-like assembly with encapsulated guest molecules is generated with N-benzyl substituents. The N-hexyl groups engender an XB-induced polymeric pseudocapsule and an XB-induced dimeric capsule with entrapped 1,4-dioxane guest molecules. The N-propyl and N-cyclohexyl groups generate deep cavity cavitands. The deep cavity cavitands possess cavities for self-inclusion leading to polymeric herringbone arrangement in one direction and that pack into 3D polymeric a…

chemistry.chemical_classification010405 organic chemistryChemistryStereochemistryIntermolecular forceSupramolecular chemistryGeneral ChemistryNuclear magnetic resonance spectroscopyResorcinarene010402 general chemistry01 natural sciencesBiochemistryCatalysissupramolecular chemistry0104 chemical sciences3. Good healthColloid and Surface Chemistryhalogen bondingHalogenPolymer chemistrysupramolekulaarinen kemiaMoleculeDumbbellta116AlkylJournal of the American Chemical Society
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Formation and Transformations of Organic Salt Hydrates: Four Encenicline Hydrochloride Monohydrates and Respective Isostructural Desolvates

2018

Encenicline hydrochloride (Enc-HCl) crystallizes in four different monohydrate phases, but at the same time crystallization in a nonsolvated phase is not observed, indicating that water plays a crucial role in guiding the crystallization process and ensuring structure stability. All monohydrate phases show exceptionally high stability, and the main structural motif stays intact even after dehydration, leading to isostructural (for I and II) or isomorphic (for III) desolvates. Three monohydrate phases with determined crystal structure information consists of Enc-HCl-water hexamers that are stacked into similar slabs, that are further packed identically in monohydrates I, II, and III. The fea…

chemistry.chemical_classification010405 organic chemistryHydrochlorideIntermolecular forceSalt (chemistry)General ChemistryCrystal structureRandom hexamer010402 general chemistryCondensed Matter Physics01 natural sciences0104 chemical scienceslaw.inventionchemistry.chemical_compoundCrystallographychemistrylawPhase (matter)General Materials ScienceIsostructuralCrystallizationCrystal Growth & Design
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Two Polymorphic Forms of a Six-Coordinate Mononuclear Cobalt(II) Complex with Easy-Plane Anisotropy: Structural Features, Theoretical Calculations, a…

2016

A mononuclear cobalt(II) complex [Co(3,5-dnb)2(py)2(H2O)2] {3,5-Hdnb = 3,5-dinitrobenzoic acid; py = pyridine} was isolated in two polymorphs, in space groups C2/c (1) and P21/c (2). Single-crystal X-ray diffraction analyses reveal that 1 and 2 are not isostructural in spite of having equal formulas and ligand connectivity. In both structures, the Co(II) centers adopt octahedral {CoN2O4} geometries filled by pairs of mutually trans terminal 3,5-dnb, py, and water ligands. However, the structures of 1 and 2 disclose distinct packing patterns driven by strong intermolecular O-H···O hydrogen bonds, leading to their 0D→2D (1) or 0D→1D (2) extension. The resulting two-dimensional layers and one-…

chemistry.chemical_classification010405 organic chemistryHydrogen bondChemistryBinding energyIntermolecular forceSpace groupCrystal structure010402 general chemistry01 natural sciences0104 chemical sciencesInorganic ChemistryCrystallographyOctahedronNon-covalent interactionsPhysical and Theoretical ChemistryIsostructuralInorganic chemistry
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Chalcogen‐Bonding Interactions in Telluroether Heterocycles [Te(CH2)m]n(n=1–4;m=3–7)

2020

The Te⋅⋅⋅Te secondary bonding interactions (SBIs) in solid cyclic telluroethers were explored by preparing and structurally characterizing a series of [Te(CH2 )m ]n (n=1-4; m=3-7) species. The SBIs in 1,7-Te2 (CH2 )10 , 1,8-Te2 (CH2 )12 , 1,5,9-Te3 (CH2 )9 , 1,8,15-Te3 (CH2 )18 , 1,7,13,19-Te4 (CH2 )20 , 1,8,15,22-Te4 (CH2 )24 and 1,9,17,25-Te4 (CH2 )28 lead to tubular packing of the molecules, as has been observed previously for related thio- and selenoether rings. The nature of the intermolecular interactions was explored by solid-state PBE0-D3/pob-TZVP calculations involving periodic boundary conditions. The molecular packing in 1,7,13,19-Te4 (CH2 )20 , 1,8,15,22-Te4 (CH2 )24 and 1,9,17,…

chemistry.chemical_classification010405 organic chemistryOrganic ChemistryIntermolecular forcechemistry.chemical_elementThio-General ChemistryOrbital overlap010402 general chemistry01 natural sciencesBond orderCatalysis0104 chemical sciencesChalcogenCrystallographychemistryMoleculeNon-covalent interactionsTelluriumChemistry – A European Journal
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The influence of CH bond polarization on the self-association of 2-acylaminopyrimidines by NH/CH···O/N interactions: XRD, NMR, DFT, and AIM study

2013

The single crystal structures of two 2-acylaminopyrimidines, where alkyl groups in acyl moiety are iso-propyl (1) and dichloromethyl (2), were solved by X-ray diffraction method. The strength of intermolecular hydrogen bonding interactions depends on the C–H bond polarization increased by exchanging two methyl groups by chlorine atoms in the adjacent substituent. The computational methods provide an additional insight into the intermolecular interactions and are utilized in explaining the differences in the observed crystal structures. The experimental and computational data together explain the differences in the formed aggregates and revealed that these simple substitutions cause crucial …

chemistry.chemical_classification010405 organic chemistryStereochemistryHydrogen bondIntermolecular forceSubstituentCrystal structure010402 general chemistryCondensed Matter Physics01 natural sciences0104 chemical scienceschemistry.chemical_compoundCrystallographychemistryMoietyPhysical and Theoretical ChemistryPolarization (electrochemistry)Single crystalAlkylStructural Chemistry
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Solid state solvation effect and reduced amplified spontaneous emission threshold value of glass forming DCM derivative in PMMA films

2015

Abstract Molecule crystallization is one of the limitations for obtaining high-gain organic laser systems. One of the examples is well known red laser dye 4-(dicyanomethylene)-2-methyl-6-(p-dimethylaminostyryl)-4H-pyran (DCM). The lowest threshold value of amplified spontaneous emission was achieved by doping 2 wt% of DCM molecule in tris-(8-hydroxy quinoline) aluminum (Alq3) matrix. Further increase of the DCM dye concentration makes the system less efficient as its threshold value increases. It is due to large intermolecular interaction, which induces photoluminescence quenching. Compounds with reduced intermolecular interaction could be prospective in organic laser systems due to higher …

chemistry.chemical_classificationAmplified spontaneous emissionPhotoluminescenceDye laserOrganic laserMaterials scienceIntermolecular forceBiophysicsAnalytical chemistrySolvationGeneral ChemistryPolymerCondensed Matter PhysicsThreshold energyPhotochemistryBiochemistryAtomic and Molecular Physics and OpticschemistryJournal of Luminescence
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Complexes of organometallic compounds

1972

Abstract The novel organobismuth(V) derivatives Ph 3 BiCl(Ox) and Ph 3 BiBr(Ox) (Ox − = 8-quinolinate) have been synthesized, and their configuration investigated in the solid state and in solution. The complexes are assumed to be octahedral in the solid, with Ox − acting as a chelating base and the halide atoms coordinating to bismuth. Tentative assignments of infrared bands in the 300–80 cm −1 region to BiHal and other skeletal modes are proposed. The main effect of solvents appears to be the weakening and breaking of BiN-bonds.

chemistry.chemical_classificationBase (chemistry)InfraredHydrogen bondOrganic ChemistryInorganic chemistryIntermolecular forceSolid-stateHalidechemistry.chemical_elementInfrared spectroscopyGeneral MedicineBiochemistryBismuthInorganic ChemistryOctahedronchemistryAtomPolymer chemistryMaterials ChemistryThalliumChelationPhysical and Theoretical ChemistryGroup 2 organometallic chemistryBioinorganic Chemistry
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1,1-Dichloroethane: a molecular crystal structure without van der Waals contacts?

2008

Isochoric and isobaric freezing of 1,1-dichloroethane, CH3CHCl2, mp = 176.19 K, yielded the orthorhombic structure, space group Pnma, with the fully ordered molecules, in the staggered conformation, located on mirror planes. The CH3CHCl2 ambient-pressure (0.1 MPa) structures were determined at 160 and 100 K, whereas the 295 K high-pressure structures were determined at 0.59 and 1.51 GPa. At 0.1 MPa, all intermolecular distances are considerably longer than the sums of the van der Waals radii, and only a pressure of about 1.5 GPa squeezed the Cl···Cl and Cl···H contacts to distances commensurate with these sums. The exceptionally large difference between the melting points of isomeric 1,1- a…

chemistry.chemical_classificationChemistryIntermolecular forceAtoms in moleculesVan der Waals strainVan der Waals surfaceSurfaces Coatings and FilmsTheorem of corresponding statessymbols.namesakeCrystallographyMaterials ChemistrysymbolsNon-covalent interactionsVan der Waals radiusPhysical and Theoretical Chemistryvan der Waals forceThe journal of physical chemistry. B
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