Search results for "Lytic"

showing 10 items of 11146 documents

Heavy enzymes and the rational redesign of protein catalysts

2019

Abstract An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled “heavy” dihydrofolate reductases and their natural‐abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present…

010402 general chemistryProtein Engineering01 natural sciencesBiochemistryCatalysisEnzyme catalysisisotope effectsCatalytic DomainDihydrofolate reductaseMolecular BiologyAlcohol dehydrogenasechemistry.chemical_classificationalcohol dehydrogenasesCarbon Isotopesdihydrofolate reductasesbiologyBacteriaNitrogen Isotopes010405 organic chemistryConceptOrganic ChemistryAlcohol DehydrogenaseActive siteSubstrate (chemistry)Protein engineeringDeuteriumCombinatorial chemistrymolecular dynamics0104 chemical sciencesKineticsTetrahydrofolate Dehydrogenaseenzyme engineeringEnzymechemistrybiology.proteinBiocatalysisMolecular MedicineConcepts
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High-resolution rovibrational spectroscopy of c-C3H2+: The ν7 C–H antisymmetric stretching band

2020

Abstract The ν 7 antisymmetric C–H stretching fundamental of c- C 3 H 2 + has been characterized in a cryogenic 22-pole ion trap by a novel type of action spectroscopy, in which the rovibrational excitation of c- C 3 H 2 + is detected as a slowing down of the low-temperature reaction c- C 3 H 2 +  + H2 → C 3 H 3 + + H. Ninety-one rovibrational transitions with partly resolved fine structure doublets were measured in high resolution. Supported by high-level quantum chemical calculations, spectroscopic parameters were determined by fitting the observed lines with an effective Hamiltonian for an asymmetric rotor in a doublet electronic ground state, X ˜ A 1 2 , yielding a band origin at 3113.6…

010405 organic chemistryAntisymmetric relationChemistryOrganic ChemistryRotational–vibrational spectroscopy010402 general chemistry01 natural sciencesMolecular physics0104 chemical sciencesAnalytical ChemistryInorganic Chemistrysymbols.namesakesymbolsMoleculeIon trapGround stateHamiltonian (quantum mechanics)SpectroscopySpectroscopyExcitationJournal of Molecular Structure
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A novel MALDI-MS approach for the analysis of neutral metallosupramolecular architectures

2011

Matrix assisted laser desorption/ionisation mass spectrometry (MALDI-MS) methods have been developed for the characterisation of neutral [2×2] metallogrids derived fromdiimine, dihydrazone and diacylhydrazone ligands. Such grids may be protonated in solution to give cationic species but in most cases these are labile, so that rather delicate conditions are required for observation of the intact metallogrids as monoprotonated derivatives in the gas phase. As a MALDI matrix, 2,4,6-trihydroxyacetophenone (THAP) is sufficiently acidic to enable monoprotonation of the grids unaccompanied by dissociation, and if the grid sample is initially deposited by a layering technique to avoid any prelimina…

010405 organic chemistryChemistryAnalytical chemistrySupramolecular chemistryCrystal structure010402 general chemistryMass spectrometryGrid01 natural sciencesDissociation (chemistry)0104 chemical sciencesInorganic ChemistryCluster (physics)Mass spectrum[CHIM]Chemical Sciencesta116StoichiometryComputingMilieux_MISCELLANEOUS
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Structural studies of homoisoflavonoids: NMR spectroscopy, X-ray diffraction, and theoretical calculations

2010

Abstract In this article we present a detailed structural investigation for five homoisoflavonoids, molecules important from the pharmacological point of view. For studying the electron distribution as well as its influence on the physicochemical properties, NMR spectroscopy, X-ray diffraction, and theoretical calculations have been used. Nuclear magnetic shieldings obtained by using DFT calculations for optimized molecular geometries are correlated with the experimentally determined chemical shifts. The theoretical data are well in agreement with the experimental values. The single crystal X-ray structures of homoisoflavonoid derivatives 1, 3, and 4 have been solved. The molecular geometri…

010405 organic chemistryChemistryChemical shiftOrganic ChemistryIntermolecular forceNuclear magnetic resonance spectroscopy010402 general chemistry01 natural sciences0104 chemical sciencesAnalytical ChemistryInorganic ChemistryCrystalMolecular geometryComputational chemistryX-ray crystallographyPhysical chemistryMoleculeSingle crystalSpectroscopyJournal of Molecular Structure
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Novel Stannatrane N(CH2CMe2O)2(CMe2CH2O)SnO-t-Bu and Related Oligonuclear Tin(IV) Oxoclusters. Two Isomers in One Crystal

2016

The syntheses of the alkanolamine N(CH2CMe2OH)2(CMe2CH2OH) (1), of the stannatrane N(CH2CMe2O)2(CMe2CH2O)SnO-t-Bu (2), and of the trinuclear tin oxocluster 3 consisting of the two isomers [(μ3-O)(O-t-Bu){Sn(OCH2CMe2)(OCMe2CH2)2N}3] (3a) and [(μ3-O)(μ3-O-t-Bu){Sn(OCH2CMe2)(OCMe2CH2)2N}3] (3b) as well as the isolation of a few crystals of the hexanuclear tin oxocluster [LSnOSn(OH)3LSnOH]2 [L = N(CH2CMe2O)2(CMe2CH2O)] (4) are reported. The compounds were characterized by 1H, 13C, 15N, and 119Sn (1–3) nuclear magnetic resonance and infrared spectroscopy, electrospray ionization mass spectrometry, and single-crystal X-ray diffraction analysis (1–4). A graph set analysis was performed for compoun…

010405 organic chemistryChemistryElectrospray ionizationAnalytical chemistryInfrared spectroscopychemistry.chemical_element010402 general chemistry01 natural sciencesGraph0104 chemical sciencesInorganic ChemistryCrystalCrystallographychemistry.chemical_compoundDensity functional theoryAlkanolaminePhysical and Theoretical ChemistryTinInorganic Chemistry
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Photochemically Produced Singlet Oxygen: Applications and Perspectives

2018

This Review aims to provide early stage researchers with an updated guide to applications of photochemically produced singlet oxygen and, at the same time, widen the experienced researcher's perspectives in a holistic approach to singlet oxygen chemistry. Without being exhaustive, literature between 2010 and early 2018 has been surveyed by focusing on a critical evaluation of new knowledge and applications. After an introductory section concerning singlet oxygen production, detection, and interactions with biological systems, subsequent sections describe current applications of singlet-oxygen-enabled technology. Besides strictly chemical synthesis applications, attention has been given to t…

010405 organic chemistryChemistryEnvironmental remediationSinglet oxygenmedicine.medical_treatmentOrganic ChemistryPhotodynamic therapySettore CHIM/06 - Chimica Organica010402 general chemistryPhotochemistry01 natural sciencessinglet oxygen0104 chemical sciencesAnalytical Chemistryphotooxygenation reactionchemistry.chemical_compoundphotodynamic therapymedicinePhysical and Theoretical Chemistryenvironmental remediationphototherapy
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Interplay of hydrogen bonding and π–π interactions in the molecular complex of 2,6-lutidine N-oxide and water

2006

Abstract The crystal and molecular structure of 2,6-lutidine N-oxide monohydrate (1) has been determined by X-ray diffraction analysis. Each water molecule is acting as bridging ligand between the N→O moieties of two 2,6-lutidine N-oxide molecules through moderate strong intermolecular hydrogen bonding (O–H⋯O, O⋯O distances are 2.787(2) and 2.832 (2) A) giving rise to a one-dimensional (1D) polymeric helical chain. A two-dimensional (2D) layered network is then formed by self-assembly of 1D helical chains via strong π–π interactions of the aromatic rings (interplanar distances 3.385 A). The molecular structure of 1 is compared with that for the already reported molecular structures of 2-ace…

010405 organic chemistryChemistryHydrogen bondOrganic ChemistryIntermolecular forceAromaticityBridging ligand010402 general chemistry01 natural sciences0104 chemical sciencesAnalytical ChemistryInorganic ChemistryCrystalCrystallographychemistry.chemical_compoundPyridineMolecule26-LutidineSpectroscopyJournal of Molecular Structure
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2020

New soluble and intensely near-IR-absorbing transition metal (Ti, Zr, V, Ni) complexes were synthesized using a redox non-innocent N,N’-bis(3,5-di-tertbutyl-2-hydroxy-phenyl) -1,2-phenylenediamine (H4L) as a ligand precursor. In all the complexes, ([Ti(Lox)2, [Zr(Lox)2], [V(Lsq1)(HLox)] and [Ni(HLox)2], two organic molecules coordinate to the metal center as tri- or tetradentate ligands. The solid-state structures of the complexes were determined using single crystal XRD, and the compounds were further characterized with Electrospray Ionisation Mass Spectrometry (ESI-MS). Thermoanalytical measurements indicated the thermal stabilities of the complexes. All compounds absorb strongly in the n…

010405 organic chemistryChemistryLigandOrganic ChemistryPharmaceutical Science010402 general chemistryMass spectrometryElectrochemistry01 natural sciencesRedoxNon-innocent ligand0104 chemical sciencesAnalytical ChemistryMetalCrystallographyTransition metalChemistry (miscellaneous)visual_artDrug Discoveryvisual_art.visual_art_mediumMolecular MedicinePhysical and Theoretical ChemistrySingle crystalMolecules
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NMR T1-Relaxation Measurements on Paramagnetic Organolanthanides: An Alternative Tool for Structure Determination in Solution

2005

1H NMR investigations were conducted on four paramagnetic organolanthanides, all bearing the tetraisopropylcyclopentadienyl ligand Cp4i (HC5iPr4) in order to verify whether or not interactions observed in the solid state are maintained in solution. In some cases variable-temperature experiments were necessary to enhance the resolution and determine the best conditions for the study. The 1D NMR spectrum could be interpreted in every case. Complementary 2D COSY experiments allowed the full attribution of the signals. T1 (1H) relaxation values were determined for all the paramagnetic complexes at the most suitable temperature, and compared with those of the diamagnetic KCp4i. The same tendency…

010405 organic chemistryChemistryLigandRelaxation (NMR)Analytical chemistrySpin–lattice relaxation[ CHIM.COOR ] Chemical Sciences/Coordination chemistryNuclear magnetic resonance spectroscopy010402 general chemistry01 natural sciences0104 chemical sciencesParamagnetic complexesInorganic Chemistrychemistry.chemical_compoundParamagnetismCrystallographyNMR spectroscopyOxidation stateLanthanidesProton NMR[CHIM.COOR]Chemical Sciences/Coordination chemistryMethyl groupSpin-lattice relaxation times
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X-ray, conformation and electronic structures of 1-nitropyrrolidine

2016

Abstract The chemistry of pyrrolidine compounds has drawn much attention because of their biological activities. The crystal and molecular structure of 1-nitropyrrolidine (C4H8NNO2) at 150K, along with calculated structures (DFT and MP2), are reported herein. In the solid-state, the asymmetric part of the unit cell is composed of one quartermolecule at the position of two perpendicular mirror planes and the five-membered ring is disordered over a mirror plane, revealing the twisted conformation. Both geometries suggest slight sp3 hybridization of the amine nitrogen atom. The non-planar geometry suggests the lack of conjugation of the amine nitrogen lone pair with the nitro group, however th…

010405 organic chemistryChemistryOrganic Chemistry1-nitropyrrolidine010402 general chemistryRing (chemistry)01 natural sciencesDFTPyrrolidine0104 chemical sciencesAnalytical ChemistryInorganic ChemistryBond lengthCrystalX-rayCrystallographychemistry.chemical_compoundPerpendicularDisorderMoleculeAmine gas treatingConformationLone pairSpectroscopyJournal of Molecular Structure
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