Search results for "Maps"
showing 10 items of 236 documents
Mountain building in NW Sicily from the superimposition of subsequent thrusting and folding events during Neogene: structural setting and tectonic ev…
2017
We present a 1:25.000 scale geological map of the Kumeta-Pizzuta ridge in north-western Sicily (Italy), achieved by integrating stratigraphic, structural and geophysical data. In this area, the tectonic edifice results from the piling-up of deep-water-, carbonate platform- and pelagic platform-derived tectonic units (Imerese and Sicilide, Panormide and Trapanese domains, respectively) resulting from deformations of the former southern Tethyan continental margin. The structural setting shows interference of tectonic events, different types of structural styles and different scales of deformational patterns. Early overthrust of the Imerese on the Trapanese units (since the late Serravallian) …
Quaternary marine and continental unconformity-bounded stratigraphic units of the NW Sicily coastal belt
2017
In the coastal sector of NW Sicily, the regional correlation of relevant unconformities recognised within the Quaternary sedimentary successions allowed the mapping of seven unconformity-bounded stratigraphic units (UBSUs). The regional unconformities are marine or subaerial erosional surfaces, as well as non-depositional surfaces, locally marked by paleosoils. The erosional surfaces were produced from marine abrasion, surface water overland/concentrated flow, river erosion, karst solution, mass movement, or wind erosion. The main lithofacies of the Quaternary UBSUs consist of: (a) marine and coastal bioclastic calcarenites, (b) aeolian sandstones, (c) river deposits, (d) colluvial deposits…
Identifying Early Warning Signals for the Sudden Transition from Mild to Severe Tobacco Etch Disease by Dynamical Network Biomarkers
2019
This article belongs to the Special Issue The Complexity of the Potyviral Interaction Network.
Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study.
2017
AbstractRNA-Seq analysis is a strong tool to gain insight into the molecular responses to biotic stresses in plants. The objective of this work is to identify specific and common molecular responses between different transcriptomic data related to fungi, virus and bacteria attacks in Malus x domestica. We analyzed seven transcriptomic datasets in Malus x domestica divided in responses to fungal pathogens, virus (Apple Stem Grooving Virus) and bacteria (Erwinia amylovora). Data were dissected using an integrated approach of pathway- and gene- set enrichment analysis, Mapman visualization tool, gene ontology analysis and inferred protein-protein interaction network. Our meta-analysis revealed…
Molecular signatures of silencing suppression degeneracy from a complex RNA virus
2021
As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…
Temporal and spatial patterns of trawl fishing activities in the Adriatic Sea (Central Mediterranean Sea, GSA17)
2020
Abstract Trawl fishing activities have occurred for centuries on large spatial scale in the entire Mediterranean Sea, and today they are considered as one of the main and widespread causes of anthropogenic disturbance and habitat alteration in the marine environment. In order to delineate when, where and how marine ecosystems have been perturbed and to implement ecosystem-based management strategies, the identification and investigation of the spatial and temporal distribution of fishing effort and the fleet dynamics play a key role. In this context, Geospatial Technologies such as the Automatic Identification System (AIS) could represent a useful tool. The aim of the present work is to rec…
Cell type specific impact of cannabinoid receptor signaling in somatosensory barrel map formation in mice
2019
Endocannabinoids and their receptors are highly abundant in the developing cerebral cortex and play major roles in early developmental processes, for example, neuronal proliferation, migration, and axonal guidance as well as postnatal plasticity. To investigate the role of the cannabinoid type 1 receptor (CB1) in the formation of sensory maps in the cerebral cortex, the topographic representation of the whiskers in the primary somatosensory cortex (barrel field) of adult mice with different cell type specific genetic deletion of CB1 was studied. A constitutive absence of CB1 (CB1-KO) significantly decreased the total area of the somatosensory cortical map, affecting barrel, and septal areas…
Integrative analysis of key candidate genes and signaling pathways in autoimmune thyroid dysfunction related to anti-CTLA-4 therapy by bioinformatics
2020
Summary Cytotoxic T lymphocyte-associated antigen-4 (CTLA-4), the first immune checkpoint to be targeted clinically, has provided an effective treatment option for various malignancies. However, the clinical advantages associated with CTLA-4 inhibitors can be offset by the potentially severe immune-related adverse events (IRAEs), including autoimmune thyroid dysfunction. To investigate the candidate genes and signaling pathways involving in autoimmune thyroid dysfunction related to anti-CTLA-4 therapy, integrated differentially expressed genes (DEGs) were extracted from the intersection of genes from Gene Expression Omnibus (GEO) datasets and text mining. The functional enrichment was perfo…
Defining Human Tyrosine Kinase Phosphorylation Networks Using Yeast as an In Vivo Model Substrate.
2017
Systematic assessment of tyrosine kinase-substrate relationships is fundamental to a better understanding of cellular signaling and its profound alterations in human diseases such as cancer. In human cells, such assessments are confounded by complex signaling networks, feedback loops, conditional activity, and intra-kinase redundancy. Here we address this challenge by exploiting the yeast proteome as an in vivo model substrate. We individually expressed 16 human non-receptor tyrosine kinases (NRTKs) in Saccharomyces cerevisiae and identified 3,279 kinase-substrate relationships involving 1,351 yeast phosphotyrosine (pY) sites. Based on the yeast data without prior information, we generated …
Identification of the integrin-binding site on coagulation factor VIIa required for proangiogenic PAR2 signaling.
2018
The tissue factor (TF) pathway serves both hemostasis and cell signaling, but how cells control these divergent functions of TF remains incompletely understood. TF is the receptor and scaffold of coagulation proteases cleaving protease-activated receptor 2 (PAR2) that plays pivotal roles in angiogenesis and tumor development. Here we demonstrate that coagulation factor VIIa (FVIIa) elicits TF cytoplasmic domain-dependent proangiogenic cell signaling independent of the alternative PAR2 activator matriptase. We identify a Lys-Gly-Glu (KGE) integrin-binding motif in the FVIIa protease domain that is required for association of the TF-FVIIa complex with the active conformer of integrin β1. A po…