Search results for "Mathematical"

showing 10 items of 7967 documents

A study on time discretization and adaptive mesh refinement methods for the simulation of cancer invasion: The urokinase model

2016

In the present work we investigate a model that describes the chemotactically and proteolytically driven tissue invasion by cancer cells. The model is a system of advection-reaction-diffusion equations that takes into account the role of the serine protease urokinase-type plasminogen activator. The analytical and numerical study of such a system constitutes a challenge due to the merging, emerging, and traveling concentrations that the solutions exhibit. Classical numerical methods applied to this system necessitate very fine discretization grids to resolve these dynamics in an accurate way. To reduce the computational cost without sacrificing the accuracy of the solution, we apply adaptive…

0301 basic medicineWork (thermodynamics)Mathematical optimizationFinite volume methodDiscretizationComputer scienceAdaptive mesh refinementApplied MathematicsNumerical analysisStability (learning theory)03 medical and health sciencesComputational Mathematics030104 developmental biologyDevelopment (topology)Applied mathematicsTissue invasionApplied Mathematics and Computation
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Curve Extraction by Geodesics Fusion: Application to Polymer Reptation Analysis

2016

© Springer International Publishing Switzerland 2016. In the molecular field, researchers analyze dynamics of polymers by microscopy: several measurements such as length and curvature are performed in their studies. To achieve correct analysis they need to extract the curve representing as good as possible the observed polymer shape which is a grayscale thick curve with noise and blur. We propose, in this paper, a method to extract such a curve. A polymer chain moves in a snake-like fashion (Reptation): it can self-intersect and form several complex geometries. To efficiently extract the different geometries, we generate the curve by computing a piecewise centerline browsing the shape by ge…

0301 basic medicine[ INFO ] Computer Science [cs]GeodesicGeometry02 engineering and technologyCurvature03 medical and health sciencesGraph traversalMolecular image analysis[INFO]Computer Science [cs]Grayscale curvesMorphological operationsdistanceMathematicsMicroscopyCurve orientationMathematical analysis021001 nanoscience & nanotechnologyReptation030104 developmental biologyGeodesics fusionPiecewiseShape extractionCurve sketching0210 nano-technologyShape analysis (digital geometry)
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A systems-wide understanding of photosynthetic acclimation in algae and higher plants

2017

The ability of phototrophs to colonise different environments relies on robust protection against oxidative stress, a critical requirement for the successful evolutionary transition from water to land. Photosynthetic organisms have developed numerous strategies to adapt their photosynthetic apparatus to changing light conditions in order to optimise their photosynthetic yield, which is crucial for life on Earth to exist. Photosynthetic acclimation is an excellent example of the complexity of biological systems, where highly diverse processes, ranging from electron excitation over protein protonation to enzymatic processes coupling ion gradients with biosynthetic activity, interact on drasti…

0301 basic medicine[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyAcclimatizationContext (language use)PhD traininginterdisciplinary trainingPlant Science: Biochemistry biophysics & molecular biology [F05] [Life sciences]BiologyacclimationPhotosynthesisAcclimatizationModels Biologicalmodelling03 medical and health sciencesAlgaeChlorophytaapplication industrielle[SDV.BV]Life Sciences [q-bio]/Vegetal Biologymathematical modellingPhotosynthesis: Biochimie biophysique & biologie moléculaire [F05] [Sciences du vivant]biodiversitymodélisationmicro-alguePhototrophphotosynthetic systemEcologyNon-photochemical quenchingSystems Biologyacclimatation photosynthétiquephotosynthetic optimisationPlanktonPlantsanalyse rétrospectivebiology.organism_classificationindustrial applicationEuropean Training Network030104 developmental biologyAcclimation; European Training Network; PhD training; biodiversity; interdisciplinary training; mathematical modelling; microalgal cultivation; non-photochemical quenching; photosynthetic optimisationPhotosynthetic acclimationadaptation à la lumièremicroalgal cultivationappareil photosynthétiqueBiochemical engineeringnon-photochemical quenching
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FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

2021

International audience; Single-molecule FRET (smFRET) has become a mainstream technique for studying biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by an ever- increasing number of groups has generated significant progress in sample preparation, measurement procedures, data analysis, algorithms and documentation. Several labs that employ smFRET approaches have joined forces to inform the smFRET community about streamlining how to perform experiments and analyze results for obtaining quantitative information on biomolecular structure and dynamics. The recent efforts include blind tests to assess the accuracy and the precision of smFRET experiments among d…

0301 basic medicineconformationOpen scienceComputer scienceStructural Biology and Molecular BiophysicsAMINOACYL-TRANSFER-RNAINTRAMOLECULAR DISTANCE DISTRIBUTIONSReview ArticleRESONANCE ENERGY-TRANSFER01 natural sciencesbiomoleculesFREELY DIFFUSING MOLECULESDocumentationFluorescence Resonance Energy TransferMainstreamstructural biologyBiology (General)General NeuroscienceQRNANO-POSITIONING SYSTEMGeneral MedicinedynamicsINTRINSICALLY DISORDERED PROTEINSSingle Molecule ImagingFLUORESCENCE CORRELATION SPECTROSCOPY[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsMedicinecommunitysingle-moleculeQH301-705.5ScienceAppeal[SDV.BBM.BP] Life Sciences [q-bio]/Biochemistry Molecular Biology/BiophysicsBioengineeringchemical biology010402 general chemistryGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesALTERNATING-LASER EXCITATIONBiochemistry and Chemical Biologymolecular biophysicsbiochemistryMolecular BiologyStructure (mathematical logic)General Immunology and MicrobiologySINGLE-MOLECULE FRETTRANSITION PATH TIMESData science0104 chemical sciences030104 developmental biologyFRETPosition paperGeneric health relevanceBiochemistry and Cell BiologyeLife
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An Industrial Automation Course: Common Infrastructure for Physical, Virtual and Remote Laboratories for PLC Programming

2018

<span style="font-family: 'Times New Roman',serif; font-size: 10pt; mso-fareast-font-family: 'Times New Roman'; mso-ansi-language: EN-US; mso-fareast-language: DE; mso-bidi-language: AR-SA;">This work describes the development of a teaching strategy to leverage current simulation tools and promote learning of industrial automation systems. Specifically, Programmable Logic Controller (PLC) programming in an industrial automation course. We propose an infrastructure where it is possible to work with physical, virtual and mixed laboratories</span>

0301 basic medicinelcsh:T58.5-58.64Computer sciencebusiness.industrylcsh:Tlcsh:Information technologyIndustrial Automation Teaching On-line Education OPC-UA Virtual Laborato-ry Virtual commissioning PLC programmingGeneral EngineeringProgrammable logic controllerAutomationlcsh:TechnologyEnsenyament virtual03 medical and health sciences030104 developmental biologyTheoryofComputation_MATHEMATICALLOGICANDFORMALLANGUAGESLeverage (statistics)businessSoftware engineeringIndustrial automation systemsAutomatitzacióInternational Journal of Online Engineering (iJOE)
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Anatomical Variations in the Sinoatrial Nodal Artery: A Meta-Analysis and Clinical Considerations

2016

Background and Objective The sinoatrial nodal artery (SANa) is a highly variable vessel which supplies blood to the sinoatrial node (SAN). Due to its variability and susceptibility to iatrogenic injury, our study aimed to assess the anatomy of the SANa and determine the prevalence of its anatomical variations. Study Design An extensive search of major electronic databases was performed to identify all articles reporting anatomical data on the SANa. No lower date limit or language restrictions were applied. Anatomical data regarding the artery were extracted and pooled into a meta-analysis. Results Sixty-six studies (n = 21455 hearts) were included in the meta-analysis. The SANa usually aros…

0301 basic medicinemedicine.medical_specialtyPopulation Dynamicslcsh:MedicineCoronary Artery Disease030204 cardiovascular system & hematologyResearch and Analysis MethodsVascular MedicineCoronary artery diseaseDatabase and Informatics Methods03 medical and health sciencesMathematical and Statistical Techniques0302 clinical medicinemedicine.arteryInternal medicineMedicine and Health SciencesmedicineStatistical MethodsDatabase SearchingPulmonary Arterieslcsh:ScienceSinoatrial nodal arteryCoronary ArteriesMultidisciplinaryPopulation BiologySinoatrial nodebusiness.industryIatrogenic injurylcsh:RBiology and Life SciencesArteriesmedicine.diseaseGeographic DistributionCoronary arteriesGeographic distributionmedicine.anatomical_structureMeta-analysisPhysical SciencesCardiovascular AnatomyCardiologyBlood Vesselslcsh:Q030101 anatomy & morphologyAnatomybusinessMathematicsStatistics (Mathematics)Research ArticleMeta-AnalysisPLOS ONE
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Are There Any Parameters Missing in the Mathematical Models Applied in the Process of Spreading COVID-19?

2021

Simple Summary Nowadays, enhancing development of mathematical models is very important to help in the prediction of coronavirus disease 2019 (COVID1-19). However, the vast majority of published model-based predictions do not cover people who left the epidemic COVID-19 positive (alive) and they must be included in studies to guarantee a more accurate model for application in public health. The epidemic development phenomenon can be obtained with a modelling framework. Abstract On 11 March 2020, coronavirus disease 2019 (COVID-19) was declared a pandemic by the World Health Organization (WHO). As of 12.44 GMT on 15 January 2021, it has produced 93,640,296 cases and 2,004,984 deaths. The use …

0301 basic medicinemodelling studyProcess (engineering)media_common.quotation_subjectControl (management)Social WelfareBiologia Models matemàticsBiologyArticleGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences0302 clinical medicinePhenomenonPandemicUK030212 general & internal medicineDuration (project management)Epidemiologialcsh:QH301-705.5media_commonActuarial scienceGeneral Immunology and MicrobiologyMathematical modelCOVID-19Virus030104 developmental biologylcsh:Biology (General)ItalySpainGeneral Agricultural and Biological SciencesSeriousnessBiology
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Ferritin and C-reactive protein are predictive biomarkers of mortality and macrophage activation syndrome in adult onset Still's disease. Analysis of…

2020

ObjectiveTo assess the predictive role of ferritin and C-reactive protein (CRP) on occurrence of macrophage activation syndrome (MAS) and mortality in patients with adult onset Still's disease (AOSD), a rare and severe disease, included in the multicentre Gruppo Italiano di Ricerca in Reumatologia Clinica e Sperimentale (GIRRCS) cohort.MethodsThe predictive role, at the time of diagnosis, of serum levels of ferritin and CRP on occurrence of MAS and mortality, was evaluated by logistic regression analyses and receiver-operating characteristic (ROC) curves were built to identify patients at high risk of MAS and mortality, respectively.ResultsIn assessed 147 patients with AOSD, levels of ferri…

0301 basic medicinemyalgiaAdult-OnsetMalePredictive Value of TestPathology and Laboratory MedicineLogistic regressionBiochemistryGastroenterologyCohort StudiesMathematical and Statistical Techniques0302 clinical medicineMedicine and Health SciencesMultidisciplinarybiologyMacrophage Activation SyndromeStatisticsQRMiddle AgedC-Reactive ProteinsC-Reactive ProteinPredictive value of testsPhysical SciencesCohortRegression AnalysisMedicineFemalemedicine.symptomStill's Disease Adult-OnsetResearch ArticleCohort studyHumanAdultmedicine.medical_specialtyPatientsLogistic ModelInflammatory DiseasesSciencePainStill's Disease Adult-Onset.Research and Analysis Methods03 medical and health sciencesAdult; Biomarkers; C-Reactive Protein; Cohort Studies; Female; Ferritins; Humans; Logistic Models; Macrophage Activation Syndrome; Male; Middle Aged; Predictive Value of Tests; ROC Curve; Still's Disease Adult-OnsetSigns and SymptomsDiagnostic MedicinePredictive Value of TestsInternal medicinemedicineHumansStatistical Methods030203 arthritis & rheumatologyFerritinbusiness.industryC-reactive proteinBiology and Life SciencesProteinsProtein ComplexesMyalgiaBiomarkermedicine.diseaseStill's DiseaseHealth CareFerritin030104 developmental biologyLogistic ModelsROC CurveMacrophage activation syndromeMultivariate AnalysisFerritinsbiology.proteinCohort StudiebusinessMathematicsBiomarkers
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Defining sensory descriptors: towards writing rules based on terminology

2007

International audience; Descriptive analysis relies upon the use of sensory descriptors. They are words generally associated to a definition aimed at helping their understanding. However, the writing rules for such definitions remain implicit. The present work is a collaborative attempt from sensory analysts and linguists to get further insight into how definitions are elaborated.Definition formulations were analyzed according to linguistic criteria, syntactic (type and number of nouns, verbs and adjectives) as well as semantic ones (relations of synonymy, metaphor or analogy between the descriptors and their definitions). Such a linguistic analysis was performed on one hundred descriptor d…

030309 nutrition & dieteticsMetaphorComputer sciencemedia_common.quotation_subjectrègles d'écritureAnalogycomputer.software_genreSemanticsPsycholinguisticsTerminology03 medical and health sciences0404 agricultural biotechnologyNounterminologyterminologie[SHS.LANGUE]Humanities and Social Sciences/LinguisticsSet (psychology)ComputingMilieux_MISCELLANEOUSmedia_commonStructure (mathematical logic)0303 health sciencesNutrition and Dieteticsbusiness.industry[SCCO.NEUR]Cognitive science/Neurosciencelinguisticswriting rules04 agricultural and veterinary sciences040401 food scienceLinguistics[ SCCO.NEUR ] Cognitive science/Neuroscience[SCCO.PSYC]Cognitive science/Psychology[SCCO.PSYC] Cognitive science/PsychologyArtificial intelligencebusinesscomputerNatural language processinglinguistiqueFood Science
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Teacher Guidance in Mathematical Problem-Solving Lessons: Insights from Two Professional Development Programs

2019

When implementing a problem-solving lesson, the teacher needs to provide students appropriate guidance during problem solving. This demanding task requires understanding students’ work in progress and giving them necessary help without constraining their thinking. In this article, we share insights from two professional development programs on how teachers guided students’ problem solving and how they reflected on these instances. One of the programs included Finnish pre-service teachers, while the other program included US in-service teachers. We analyzed video-recorded problem-solving lessons from 16 Finnish and 2 US teachers in grades 6–9. We found two themes about teacher guidance of st…

05 social sciencesProfessional development050301 educationSpace (commercial competition)Work in processTeacher educationTask (project management)0502 economics and businessComputingMilieux_COMPUTERSANDEDUCATIONMathematics educationMathematical problem solvingPsychology0503 education050203 business & managementTheme (narrative)
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