Search results for "Microscopy"

showing 10 items of 3390 documents

Reliable Detection and Smart Deletion of Malassez Counting Chamber Grid in Microscopic White Light Images for Microbiological Applications

2015

AbstractIn biology, hemocytometers such as Malassez slides are widely used and are effective tools for counting cells manually. In a previous work, a robust algorithm was developed for grid extraction in Malassez slide images. This algorithm was evaluated on a set of 135 images and grids were accurately detected in most cases, but there remained failures for the most difficult images. In this work, we present an optimization of this algorithm that allows for 100% grid detection and a 25% improvement in grid positioning accuracy. These improvements make the algorithm fully reliable for grid detection. This optimization also allows complete erasing of the grid without altering the cells, whic…

Microbiological TechniquesMicroscopy[ INFO.INFO-TS ] Computer Science [cs]/Signal and Image ProcessingComputer sciencebusiness.industryMalassezGridSet (abstract data type)OpticsHomomorphic filtering[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processingimage analysisnoise filteringImage Processing Computer-AssistedWhite lightFourier transformSegmentationComputer visionArtificial intelligencehomomorphic filteringbusinessInstrumentation
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Biofilm development by potentially pathogenic non-pigmented rapidly growing mycobacteria

2008

Abstract Background A study to evaluate the biofilm-development ability in three different media (Middlebrook 7H9, sterile tap water and PBS-5% glucose) was performed with 19 collection strains from 15 different species on non-pigmented rapidly growing mycobacteria (NPRGM). A microtiter plate assay was developed to evaluate the percentage of covered surface of the microtiter plate wells in different days from day 1 to day 69. Results All strains were able to develop biofilm in all the tested media. Middlebrook 7H9 showed the fastest growth, followed by sterile tap water and PBS-5% glucose. A sigmoid growth curve was detected in all the strains both in Middlebrook 7H9 and in sterile tap wate…

Microbiology (medical)Bacteriological TechniquesMicroscopy ConfocalModels Statisticallcsh:QR1-502BiofilmBiologyMicrobiologyBacterial Adhesionlcsh:MicrobiologyCulture MediaMycobacteriumMicrobiologyMicrotiter plateTap waterBiofilmsResearch ArticleBMC Microbiology
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Methodology and significance of the detection of liver-kidney-microsomal (lkm) autoantibodies in autoimmune-type chronic active hepatitis

1987

Liver-kidney-microsomal (LKM) autoantibodies are diagnostic markers for a subgroup of HBsAg-negative chronic active hepatitis, presumably owing to autoimmunity. They were originally detected by indirect immunofluorescence and can now be evaluated by radioimmunoassay, enzyme-linked immunosorbent assay, and immunoblotting. In immunoblotting LKM-positive sera react strongly with a 50-kilodalton (KD) polypeptide band of microsomes. In immunoelectron microscopy, LKM-positive sera show a binding with membranes of the endoplasmic reticulum. The LKM antigen was further identified on various isoenzymes of cytochrome P-450. Immunofluorescence is still the method of choice for screening sera routinely…

Microbiology (medical)HepatitisPathologymedicine.medical_specialtyCirrhosismedicine.diagnostic_testImmunoelectron microscopyBiochemistry (medical)Clinical BiochemistryPublic Health Environmental and Occupational HealthAutoantibodyRadioimmunoassayHematologyBiologymedicine.diseasemedicine.disease_causeImmunofluorescenceAutoimmunityMedical Laboratory TechnologyAntigenImmunologymedicineImmunology and AllergyJournal of Clinical Laboratory Analysis
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Identification of a polyketide synthase gene (pksP) of Aspergillus fumigatus involved in conidial pigment biosynthesis and virulence.

1998

Aspergillus fumigatus is an important pathogen of the immunocompromised host causing pneumonia and invasive disseminated disease with high mortality. Previously, we identified a mutant strain (white, W) lacking conidial pigmentation and, in addition, the conidia showed a smooth surface morphology, whereas wild-type (WT) conidia are grey-green and have a typical ornamentation. W conidia appeared to be less protected against killing by the host defence, e.g., were more susceptible to oxidants in vitro and more efficiently damaged by human monocytes in vitro than WT conidia. When compared to the WT, the W mutant strain showed reduced virulence in a murine animal model. Genetic analysis suggest…

Microbiology (medical)MaleImmunologyMutantGenes FungalMolecular Sequence DataVirulenceMicrobiologyAspergillus fumigatusFungal ProteinsMiceMultienzyme ComplexesPolyketide synthaseImmunology and AllergyAnimalsAmino Acid SequencePathogenGenomic LibrarybiologyBase SequenceVirulenceAspergillus fumigatusfungiWild typeGeneral MedicinePigments Biologicalbiology.organism_classificationSpecific Pathogen-Free OrganismsComplementationTransformation (genetics)Microscopy Electronbiology.proteinSequence AlignmentMedical microbiology and immunology
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Prevalence of human rotavirus serotypes in some European countries 1981-1988.

1990

An extended epidemiological survey on the circulation of the 4 established human rotavirus (HRV) serotypes in some European countries was carried out on 831 fecal strains collected from infants and young children with acute non-bacterial gastroenteritis during 1981-88. Typing was done by enzyme-linked immunosorbent assay and/or solid-phase immune electron microscopy using VP7 type-specific neutralizing monoclonal antibodies. Serotype 1 HRV strains were found to be largely predominant in this period both in Italy and other countries, whereas serotype 4 strains were less common. The number of strains of serotypes 1 and 4 circulating in Europe was equivalent only in 1983-84. Serotype 2 strains…

Microbiology (medical)SerotypeRotavirusReoviridaeEnzyme-Linked Immunosorbent AssayBiologymedicine.disease_causeVirusRotavirus InfectionsMicrobiologyFecesRotavirusHuman rotavirusmedicinePrevalenceHumansTypingSerotypingFecesGeneral Immunology and MicrobiologyInfantGeneral Medicinebiology.organism_classificationVirologyImmunohistochemistryGastroenteritisEuropeMicroscopy ElectronInfectious DiseasesChild PreschoolViral diseaseScandinavian journal of infectious diseases
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Comparing the different morphotypes of a fish pathogen - implications for key virulence factors in Flavobacterium columnare

2014

Background: Flavobacterium columnare (Bacteroidetes) is the causative agent of columnaris disease in farmed freshwater fish around the world. The bacterium forms three colony morphotypes (Rhizoid, Rough and Soft), but the differences of the morphotypes are poorly known. We studied the virulence of the morphotypes produced by F. columnare strain B067 in rainbow trout ( Onconrhynchus mykiss ) and used high-resolution scanning electron microscopy to identify the fine structures of the cells grown in liquid and on agar. We also analysed the proteins secreted extracellularly and in membrane vesicles to identify possible virulence factors. Results: Only the Rhizoid morphotype was virulent in rain…

Microbiology (medical)Virulence FactorsGliding motilityVirulenceFlavobacteriumMicrobiologyBacterial AdhesionVirulence factorMicrobiologyFish Diseases03 medical and health sciencesBacterial ProteinsFlavobacteriaceae InfectionsAnimals14. Life underwaterPathogen030304 developmental biologydisease0303 health sciencesVirulencebiology030306 microbiologySecretory VesiclesBiofilmbacteriumbiology.organism_classificationRhizoidfreshwater fishOncorhynchus mykissFlavobacterium columnareMicroscopy Electron ScanningLocomotionFlavobacteriumResearch ArticleBMC Microbiology
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Corrigendum: Flor Yeast Diversity and Dynamics in Biologically Aged Wines

2019

International audience; [This corrects the article DOI: 10.3389/fmicb.2018.02235.].

Microbiology (medical)Winevin jaunebiologyChemistrySaccharomyces cerevisiaelcsh:QR1-502BiofilmCorrectionFlorSaccharomyces cerevisiaeFLO11biology.organism_classificationMicrobiologylcsh:Microbiologybiofilmflor yeastFood sciencewine[SDV.AEN]Life Sciences [q-bio]/Food and Nutritionscanning electron microscopyFrontiers in Microbiology
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Purple urine bag syndrome in an elderly subject

2012

strain. Given the absence of bothclinical signs (apart from urinary retention) and inflamma-tory syndrome, no antibiotic therapy was initiated. Six daysafterinsertingtheindwellingcatheter,purplecolorationoftheurine bag and the catheter appeared, with no modifications ofurine color (Fig. 1). Another urine microscopy and culture per-formedlongaftercatheterwithdrawal,showeddisappearanceof the

Microbiology (medical)medicine.medical_specialtymedicine.medical_treatmentlcsh:QR1-502ColorGastroenterologylcsh:MicrobiologyUrinary catheterizationUrine microscopylcsh:Infectious and parasitic diseasesPurple urine bag syndromeInternal medicineAntibiotic therapymedicineHumanslcsh:RC109-216Escherichia coli InfectionsMedicine(all)Aged 80 and overUrinary retentionbusiness.industrySyndromeSurgeryCatheterInfectious DiseasesUrinary Tract InfectionsFemalemedicine.symptomUrinary Catheterizationbusiness
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Interactions in dual species biofilms between Listeria monocytogenes EGD-e and several strains of Staphylococcus aureus.

2008

International audience; Six environmental isolates of Staphylococcus aureus and one collection strain were investigated for their ability to form monospecies biofilms and dual species biofilms with Listeria monocytogenes EGD-e on stainless steel coupons. All isolates were able to grow as biofilms but their ability to form monospecies biofilms differed. The population of L. monocytogenes EGD-e in dual species biofilms was not affected by the presence of S. aureus isolates except for strain CIP 53.156. The effect of L. monocytogenes EGD-e on the population of S. aureus was strain dependent: S. aureus population either increased or decreased or was not affected in the presence of L. monocytoge…

MicrococcaceaeColony Count Microbial[ SDV.MP.BAC ] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologymedicine.disease_causeMESH: Listeria monocytogenesBacterial AdhesionMESH: Staphylococcus aureus0303 health scienceseducation.field_of_studybiologyStrain (chemistry)MESH : Staphylococcus aureusGeneral MedicineMESH: Stainless SteelMESH : BiofilmsStaphylococcus aureusScanning Electron MicroscopyMESH: Equipment ContaminationMESH : Microscopy Electron ScanningStaphylococcus aureusMESH: Microscopy Electron ScanningMESH : Bacterial AdhesionMESH : Stainless SteelMESH : Colony Count MicrobialPopulationFood ContaminationMESH: BiofilmsMicrobiologyMicrobiology03 medical and health sciencesSpecies SpecificityListeria monocytogenesMESH: Food-Processing IndustrymedicineMESH : Species SpecificityFood microbiologyMESH: Species SpecificityFood-Processing IndustryMESH: Bacterial AdhesioneducationMESH: Food MicrobiologyMESH: Colony Count Microbial030304 developmental biology030306 microbiologyBiofilmMESH : Food MicrobiologyMESH: Food Contaminationbiology.organism_classificationStainless SteelListeria monocytogenes[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyMESH : Food ContaminationMESH : Equipment ContaminationBiofilmsFood MicrobiologyMicroscopy Electron ScanningEquipment ContaminationMESH : Food-Processing IndustryMESH : Listeria monocytogenesBacteriaFood Science
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Observation of Knudsen effect with microcantilevers

2003

The Knudsen effect is estimated theoretically and observed experimentally using a U-shaped silicon microcantilever. Though Knudsen forces are extremely small in most cases involving microcantilevers, there exist situations where these forces can be significant and may be important in atomic force microscopy and in microelectromechanical systems (MEMS). The criteria for the presence of Knudsen forces are outlined and an analytical expression in the form of a linear function of the pressure is given for the force in the free molecular regime. The experimental results display peaks in the transitional regime while varying linearly in the molecular regime.

Microelectromechanical systemsMicroscopeSiliconAtomic force microscopyAnalytical chemistrychemistry.chemical_elementMechanicsAtomic and Molecular Physics and OpticsLinear functionComputer Science::OtherElectronic Optical and Magnetic Materialslaw.inventionKnudsen flowchemistryFree molecular flowlawKnudsen numberInstrumentationUltramicroscopy
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