Search results for "Microscopy"

showing 10 items of 3390 documents

Identification of five novel tectiviruses in Bacillus strains: analysis of a highly variable region generating genetic diversity

2013

Our biosphere is abundant with unique and small genes for which no homologs are known. These genes, often referred to as orphans or ORFans, are commonly found in bacteriophage genomes but their origins remain unclear. We discovered five novel tectivirus-like genetic elements by screening more than five-hundred Bacillus strains. A highly variable region (HVR) of these viruses was shown to harbor ORFans in most of these otherwise well-conserved bacteriophages. Previous studies demonstrated that mutations close to this region dramatically alter bacteriophage gene regulation, suggesting that the acquisition of those ORFans may provide a source of genetic diversity that is then subject to geneti…

Molecular Sequence DataBacillusBacillus PhagesMicrobiologyGenomeBacteriophageMicroscopy Electron TransmissionLysogenic cycleGenetic variationAmino Acid SequenceGenetic variabilityMolecular BiologyGeneGeneticsGenetic diversitybiologyVirionta1182Genetic VariationSequence Analysis DNAGeneral Medicinebiology.organism_classificationBacillus PhageDNA ViralSequence AlignmentTectiviridaeResearch in Microbiology
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Papillote and Piopio:DrosophilaZP-domain proteins required for cell adhesion to the apical extracellular matrix and microtubule organization

2005

Adhesion between epithelial cells and extracellular substrates is normally mediated through basal adhesion complexes. However, some cells also possess comparable junctions on their apical surface. Here, we describe two new Drosophila proteins, Piopio and Papillote, that are required for the link between the apical epithelial surface and the overlying apical extracellular matrix (aECM). The two proteins share a zona pellucida (ZP) domain with mammalian aECM components, including the tectorins found in the vertebrate inner ear. Tagged versions of both proteins localized to the apical epithelial surface. Mutations in piopio, papillote and dumpy (another gene encoding a ZP-domain protein) cause…

Molecular Sequence DataBiologyMicrotubulesEpitheliumExtracellular matrixMicrotubuleCell AdhesionmedicineExtracellularAnimalsDrosophila ProteinsWings AnimalAmino Acid SequenceCell adhesionCytoskeletonZona pellucidaMicrotubule nucleationExtracellular Matrix ProteinsSequence Homology Amino AcidMembrane ProteinsEpithelial CellsCell BiologyExtracellular MatrixCell biologyMicroscopy ElectronDrosophila melanogasterPhenotypemedicine.anatomical_structureMicroscopy FluorescenceMutationCarrier ProteinsDrosophila ProteinJournal of Cell Science
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Two α subunits and one β subunit of meprin zinc-endopeptidases are differentially expressed in the zebrafish Danio rerio

2007

Abstract Meprins are members of the astacin family of metalloproteases expressed in epithelial tissues, intestinal leukocytes and certain cancer cells. In mammals, there are two homologous subunits, which form complex glycosylated disulfide-bonded homo- and heterooligomers. Both human meprin α and meprin β cleave several basement membrane components, suggesting a role in epithelial differentiation and cell migration. There is also evidence that meprin β is involved in immune defence owing to its capability of activating interleukin-1β and the diminished mobility of intestinal leukocytes in meprin β-knockout mice. Here we show for the first time by reverse transcription PCR, immunoblotting a…

Molecular Sequence DataClinical BiochemistryDanioBiochemistryCatalysisChromosomesConserved sequenceAnimalsHumansAmino Acid SequenceRNA MessengerMolecular BiologyPeptide sequenceZebrafishConserved SequencePhylogenyZebrafishRegulation of gene expressionMessenger RNAbiologyMetalloendopeptidasesbiology.organism_classificationMolecular biologyProtein Structure TertiaryCell biologyProtein SubunitsZincGene Expression RegulationMicroscopy FluorescenceStructural Homology Proteinbiology.proteinAstacinSequence AlignmentATP synthase alpha/beta subunitsbchm
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Site-specific incorporation of perylene into an N-terminally modified light-harvesting complex II.

2010

Employing the utility of the native chemical ligation, site-specific attachment of an ultrastable perylene dye to a derivative of the major light-harvesting complex (LHCII) was demonstrated. Biochemical analysis of the conjugate indicated that the structure and function of LHCII remain largely unaffected by the N-terminal modification.

Molecular Sequence DataLight-Harvesting Protein Complexes010402 general chemistryPhotochemistry01 natural sciencesBiochemistry03 medical and health scienceschemistry.chemical_compoundPhysical and Theoretical ChemistryFLUORESCENCEPROTEIN LIGATIONPerylene030304 developmental biologyFluorescent DyesPlant Proteins0303 health sciencesSTABILITYOrganic ChemistryMICROSCOPYPlantsNative chemical ligationFluorescenceLIVE CELLS0104 chemical sciencesStructure and functionchemistryBiophysicsSMALL-MOLECULE PROBESCYSTEINEPeryleneDerivative (chemistry)DYESCysteineConjugateLight harvesting complex IIOrganicbiomolecular chemistry
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Engineering a 2D protein-DNA crystal.

2005

(Figure Presented) Weaving with DNA: A DNA-binding protein was used to control the structure of a self-assembled 2D crystal. In the absence of protein, four oligonucleotides hybridize to form a Kagome lattice of interwoven double helices with p3 symmetry (see image). Addition of protein RuvA during assembly changes the symmetry and connectivity to give a DNA-protein crystal with an approximately square unit cell. © 2005 Wiley-VCH Verlag GmbH and Co. KGaA.

Molecular Sequence DataProtein dnaPlasma protein bindingCatalysislaw.inventionCrystalNucleic acid thermodynamicschemistry.chemical_compoundlawNanotechnologyBase sequenceCrystallizationOligonucleotide Array Sequence AnalysisDNA CruciformBase SequenceEscherichia coli ProteinsDNA HelicasesNucleic Acid HybridizationGeneral MedicineDNAGeneral ChemistryDNA-Binding ProteinsMicroscopy ElectronCrystallographychemistryBiochemistryCrystallizationDNAProtein BindingAngewandte Chemie (International ed. in English)
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Monitoring the formation of biosilica catalysed by histidine-tagged silicatein.

2004

Surface bound silicatein retains its biocatalytic activity, which was demonstrated by monitoring the immobilisation of silicatein using a histidine-tag chelating anchor and the subsequent biosilicification of SiO(2) on surfaces by surface plasmon resonance spectroscopy, atomic force microscopy and scanning electron microscopy.

Molecular StructureAtomic force microscopyChemistryMetals and AlloysNanotechnologyGeneral ChemistryHistidine MetabolismSurface Plasmon ResonanceMicroscopy Atomic ForceSilicon DioxideCathepsinsCatalysisSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsMicroscopyMaterials ChemistryCeramics and CompositesBiophysicsMicroscopy Electron ScanningMoleculeChelationHistidineSurface plasmon resonanceSurface plasmon resonance spectroscopyHistidineChemical communications (Cambridge, England)
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Single quantum dot emission at telecom wavelengths from metamorphic InAs/InGaAs nanostructures grown on GaAs substrates

2011

3 figuras, 3 páginas.

Molecular beam epitaxial growthPhotoluminescenceMaterials sciencePhotonIII-V semiconductorsPhysics and Astronomy (miscellaneous)ExcitonInAs/GaAs Quantum DotsPhysics::OpticsSemiconductor growthEpitaxyNanofabricationGallium arsenidechemistry.chemical_compoundCondensed Matter::Materials ScienceAtomic force microscopyGallium arsenideIndium compoundsSemiconductor quantum dotsPhotoluminescencebusiness.industryNanostructured materialsCondensed Matter::Mesoscopic Systems and Quantum Hall EffectNanolithographychemistryQuantum dotOptoelectronicsExcitonsbusinessTelecommunicationsMolecular beam epitaxy
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On the origin of controlled anisotropic growth of monodisperse gold nanobipyramids

2021

We elucidate the crucial role of the cetyl trimethylammonium bromide (CTAB) surfactant in the anisotropic growth mechanism of gold nano-bipyramids, nano-objects with remarkable optical properties and high tunability. Atomistic molecular dynamics simulations predict different surface coverages of the CTAB (positively charged) heads and their (bromide) counterions as function of the gold exposed surfaces. High concentration of CTAB surfactant promotes formation of gold nanograins in solution that work as precursors for the smooth anisotropic growth of more elongated nano-bipyramidal objects. Nanobipyramids feature higher index facets with respect to nanorods, allowing higher CTAB coverages th…

Molecular dynamicMaterials scienceAbsorption spectroscopyScanning electron microscopeDispersity02 engineering and technologySurface active agents010402 general chemistry01 natural sciencesMolecular dynamicschemistry.chemical_compoundAbsorption spectroscopyPulmonary surfactantBromideGeneral Materials Sciencechemistry.chemical_classificationtechnology industry and agriculture021001 nanoscience & nanotechnologyOptical propertie0104 chemical scienceschemistryChemical engineeringAnisotropyNanorodGoldCounterion0210 nano-technologyScanning electron microscopyMicelleNanoscale
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Flow-through pore characteristics of monolithic silicas and their impact on column performance in high-performance liquid chromatography

2008

Abstract In order to elucidate the role of the flow-through characteristics with regard to the column performance in high-performance liquid chromatography (HPLC) native and n -octadecyl bonded monolithic silica rods and columns, respectively of 100 mm length and 4.6 mm ID with mesopores in the range between 10 and 25 nm and macropores in the range between 0.7 and 6.0 μm were examined by mercury intrusion/extrusion, scanning electron microscopy, image analysis and permeability. The obtained data of the flow-through pore sizes and porosity values as well as surface-to-volume ratio of the stationary phase skeleton enabled to predict their influence to the chromatographic separation efficiency…

Monolithic HPLC columnChromatographyChemistryScanning electron microscopeSilica gelOrganic ChemistryAnalytical chemistryGeneral MedicinePorosimetryReversed-phase chromatographySilicon DioxideBiochemistryAnalytical ChemistrySeparation processchemistry.chemical_compoundMicroscopy Electron ScanningPorosityMesoporous materialPorosityChromatography High Pressure LiquidJournal of Chromatography A
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Comprehensive pore structure characterization of silica monoliths with controlled mesopore size and macropore size by nitrogen sorption, mercury poro…

2005

The porosity of monolithic silica columns is measured by using different analytical methods. Two sets of monoliths were prepared with a given mesopore diameter of 10 and 25 nm, respectively and with gradated macropore diameters between 1.8 and 7.5 microm. After preparing the two sets of monolithic silica columns with different macro- and mesopores the internal, external and total porosity of these columns are determined by inverse size-exclusion chromatography (ISEC) using polystyrene samples of narrow molecular size distribution and known average molecular weight. The ISEC data from the 4.6 mm analytical monolithic silica columns are used to determine the structural properties of monolithi…

Monolithic HPLC columnChromatographyMacroporeScanning electron microscopeChemistryOrganic ChemistrySize-exclusion chromatographyAnalytical chemistrySilica GelMercuryGeneral MedicinePorosimetrySilicon DioxideBiochemistryAnalytical ChemistryAdsorptionMicroscopy Electron TransmissionChromatography GelMicroscopy Electron ScanningAdsorptionMesoporous materialPorosityGelsPorosityJournal of Chromatography A
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