Search results for "Models"

showing 10 items of 8211 documents

Predicting shifting sustainability trade-offs in marine finfish aquaculture under climate change

2018

Defining sustainability goals is a crucial but difficult task because it often involves the quantification of multiple interrelated and sometimes conflicting components. This complexity may be exacerbated by climate change, which will increase environmental vulnerability in aquaculture and potentially compromise the ability to meet the needs of a growing human population. Here, we developed an approach to inform sustainable aquaculture by quantifying spatio-temporal shifts in critical trade-offs between environmental costs and benefits using the time to reach the commercial size as a possible proxy of economic implications of aquaculture under climate change. Our results indicate that optim…

0106 biological sciencesTrade-offsSettore BIO/07 - EcologiaAquatic OrganismsConservation of Natural Resources010504 meteorology & atmospheric sciencesClimate ChangeMechanistic predictive modelsPopulationFisheriesClimate changeAquaculture01 natural sciencesAquaculture; Mechanistic predictive models; Mediterranean Sea; Regional climate models; Seabass; Trade-offs; Global and Planetary Change; Environmental Chemistry; Ecology; 2300Effects of global warmingseabaMediterranean SeaAnimalsHumansEnvironmental ChemistryEnvironmental impact assessmenteducationEnvironmental planning0105 earth and related environmental sciencesGeneral Environmental Scienceeducation.field_of_studyGlobal and Planetary Changemechanistic predictive modelEcology2300010604 marine biology & hydrobiologyregional climate modelFishesTemperatureNatural resourceSeabassSustainable managementSustainabilityBusinessGlobal and Planetary ChangeRegional climate models
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Effect of acyl-CoA oxidase activity on the accumulation of gamma-decalactone by the yeast Yarrowia lipolytica: a factorial approach.

2007

International audience; beta-Oxidation is a cyclic pathway involved in the degradation of lipids. In yeast, it occurs in peroxisomes and the first step is catalyzed by an acyl-CoA oxidase (Aoxp). The yeast Yarrowia lipolytica possesses several genes (POX) coding for Aoxps. This study is based on the factorial analysis of results obtained with the many POX derivative strains that have been constructed previously. The effect of interactions between Aoxps on the acyl-CoA oxidase (Aox) activity was important even at the second order. We then investigated the effect of Aox activity on growth and lactone production. Aox activity was correlated with acidification of the medium by cells and with ce…

0106 biological sciencesYarrowia lipolyticaMESH: Enzyme ActivationMetabolic Clearance RateMESH: Factor Analysis StatisticalYarrowiaBiologymodèleModels Biological01 natural sciencesApplied Microbiology and BiotechnologyLactones03 medical and health sciencesEnzyme activatorSpecies SpecificityMESH: Computer Simulation010608 biotechnologyCombinatorial Chemistry TechniquesAcyl-CoA oxidaseMESH: Species SpecificityComputer Simulation030304 developmental biologychemistry.chemical_classificationMESH: Metabolic Clearance Rate0303 health sciencesOxidase testmétabolisme des acides grasAcyl-CoA oxidase activityMESH: Acyl-CoA OxidaseMESH: Models BiologicalYarrowia[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyGeneral MedicinePeroxisomebiology.organism_classificationYeastEnzyme ActivationBiochemistrychemistrylactoneMolecular MedicineMESH: Combinatorial Chemistry TechniquesMESH: YarrowiaAcyl-CoA OxidaseFactor Analysis StatisticalLactoneMESH: Lactones
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Heterozygosity-fitness correlations in adult and juvenile Zenaida Dove, Zenaida aurita.

2013

10 pages; International audience; Understanding how fitness is related to genetic variation is of crucial importance in both evolutionary ecology and conservation biology. We report a study of heterozygosity-fitness correlations in a wild, noninbred population of Zenaida Doves, Zenaida aurita, based on a sample comprising 489 individuals (382 adults and 107 juveniles) typed at 13 microsatellite loci, resulting in a data set comprising 5793 genotypes. In both adults and juveniles, and irrespective of sex, no evidence was found for an effect of either multilocus or single-locus heterozygosity on traits potentially related to fitness such as foraging tactic, competitive ability, and fluctuatin…

0106 biological sciencesZenaida dovesPopulation Dynamics01 natural sciencesFluctuating asymmetryLinkage DisequilibriumLoss of heterozygosityGenetics (clinical)0303 health scienceseducation.field_of_studyLikelihood FunctionsEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Age Factorsoutbreeding depressionmultilocus heterozygosity[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]body conditionBiotechnologyZenaida auritaHeterozygoteGenotypeOutbreeding depressionPopulationForagingZoologyBarbadosBiology010603 evolutionary biology03 medical and health sciencesGeneticsJuvenileAnimals14. Life underwatereducationColumbidaeMolecular Biology030304 developmental biologyPopulation Density[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyModels GeneticGenetic Variationisland populationmicrosatellite markersbiology.organism_classificationGenetics PopulationBody ConstitutionGenetic Fitness[SDE.BE]Environmental Sciences/Biodiversity and EcologyMicrosatellite Repeats
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Parasite and host assemblages: embracing the reality will improve our knowledge of parasite transmission and virulence.

2010

10 pages; International audience; Interactions involving several parasite species (multi-parasitized hosts) or several host species (multi-host parasites) are the rule in nature. Only a few studies have investigated these realistic, but complex, situations from an evolutionary perspective. Consequently, their impact on the evolution of parasite virulence and transmission remains poorly understood. The mechanisms by which multiple infections may influence virulence and transmission include the dynamics of intrahost competition, mediation by the host immune system and an increase in parasite genetic recombination. Theoretical investigations have yet to be conducted to determine which of these…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitologymulti-parasitized hostsmedia_common.quotation_subjectEcology (disciplines)Virulenceinterspecies transmissionBiologyModels Biological010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyCompetition (biology)Host-Parasite InteractionsInterspecies transmission03 medical and health sciencesParasitic Diseases[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsParasite hostingParasites[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyReview Articles030304 developmental biologyGeneral Environmental Sciencemedia_common0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyVirulenceGeneral Immunology and MicrobiologyEcologyTransmission (medicine)Host (biology)General MedicineBiological EvolutionObligate parasiteimmune systemEvolutionary biologymulti-host parasitesintrahost competitionepidemiology[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciences[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Habitat modeling for cetacean management: Spatial distribution in the southern Pelagos Sanctuary (Mediterranean Sea)

2017

International audience; Effective management and conservation of wild populations requires knowledge of their habitats, especially by mean of quantitative analyses of their spatial distributions. The Pelagos Sanctuary is a dedicated marine protected area for Mediterranean marine mammals covering an area of 90,000km2 in the north-western Mediterranean Sea between Italy, France and the Principate of Monaco. In the south of the Sanctuary, i.e. along the Sardinian coast, a range of diverse human activities (cities, industry, fishery, tourism) exerts several current ad potential threats to cetacean populations. In addition, marine mammals are recognized by the EU Marine Strategy Framework Direct…

0106 biological sciences[SDE.MCG]Environmental Sciences/Global ChangesPopulationStenella coeruleoalbaOceanography010603 evolutionary biology01 natural sciencesMarine Strategy Framework DirectiveMediterranean sea[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/Ecosystemsbiology.animal14. Life underwatereducationBayesian modelsCetacean distributionseducation.field_of_studybiologyBalaenopteraEcology010604 marine biology & hydrobiologyconservation15. Life on landBottlenose dolphinbiology.organism_classificationFisheryMpaGeographyOceanographyHabitat13. Climate actionMarine protected area[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Cross-Talk between ROS and Calcium in Regulation of Nuclear Activities

2010

International audience; Calcium and Reactive Oxygen Species (ROS) are acknowledged as crucial second messengers involved in the response to various biotic and abiotic stresses. However, it is still not clear how these two compounds can play a role in different signaling pathways leading the plant to a variety of processes such as root development or defense against pathogens. Recently, it has been shown that the concept of calcium and ROS signatures, initially discovered in the cytoplasm, can also be extended to the nucleus of plant cells. In addition, it has been clearly proved that both ROS and calcium signals are intimately interconnected. How this cross-talk can finally modulate the tra…

0106 biological sciences[SDV]Life Sciences [q-bio]chemistry.chemical_elementSignallingPlant ScienceBiologyCalciumModels Biological01 natural sciencesNucleus03 medical and health sciencesNuclear proteinCrosstalkMolecular Biology030304 developmental biologyCell NucleusCalcium metabolismchemistry.chemical_classification0303 health sciencesReactive oxygen speciesfungifood and beveragesROSCell biologyMetabolic pathwaychemistryCytoplasmSecond messenger systemCalciumSignal transductionReactive Oxygen SpeciesSignal Transduction010606 plant biology & botanyMolecular Plant
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Macrophytes in boreal streams: Characterizing and predicting native occurrence and abundance to assess human impact

2016

Abstract Macrophytes are a structurally and functionally essential element of stream ecosystems and therefore indispensable in assessment, protection and restoration of streams. Modelling based on continuous environmental gradients offers a potential approach to predict natural variability of communities and thereby improve detection of anthropogenic community change. Using data from minimally disturbed streams, we described natural macrophyte assemblages in pool and riffle habitats separately and in combination, and explored their variation across large scale environmental gradients. Specifically, we developed RIVPACS-type models to predict the presence and abundance of macrophyte taxa at …

0106 biological sciencesbioassessmentRiffleEcologyEcologyNull model010604 marine biology & hydrobiologyagricultural pressureGeneral Decision SciencesSTREAMSpredictive modelsreference condition010603 evolutionary biology01 natural sciencesMacrophyteRIVPACSRIVPACSBorealHabitatwater framework directiveta1181Environmental scienceEcosystemEcology Evolution Behavior and SystematicsEcological Indicators
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Testing macroecological abundance patterns:the relationship between local abundance and range size, range position and climatic suitability among Eur…

2020

Aim A fundamental question in macroecology centres around understanding the relationship between species' local abundance and their distribution in geographical and climatic space (i.e. the multi-dimensional climatic space or climatic niche). Here, we tested three macroecological hypotheses that link local abundance to the following range properties: (a) the abundance-range size relationship, (b) the abundance-range centre relationship and (c) the abundance-suitability relationship. Location Europe. Taxon Vascular plants. Methods Distribution range maps were extracted from the Chorological Database Halle to derive information on the range and niche sizes of 517 European vascular plant speci…

0106 biological sciencescommonness and rarityClimatic suitabilityRange (biology)[SDE.MCG]Environmental Sciences/Global ChangesCommonness and raritydistributionsRange size[SDV.BID]Life Sciences [q-bio]/Biodiversityshape010603 evolutionary biology01 natural sciencesVegetation-plot dataRealized climatic nichemodelsAbundanceniche breadthAbundance (ecology)577: ÖkologiePlant ecologyspecies distribution modelsEcology Evolution Behavior and Systematicsclimatic suitabilityrange size[SDV.EE]Life Sciences [q-bio]/Ecology environmentClimatology2. Zero hungerabundanceEcologyrealized climatic nicheEcologyEcologia vegetal010604 marine biology & hydrobiologyconservationresolutionSpecies distribution modeldynamics15. Life on landvegetation-plot data580: Pflanzen (Botanik)GeographyClimatologiacommunity[SDE.BE]Environmental Sciences/Biodiversity and EcologyResolutionVegetation‐plot data
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Assessing the indirect and long-term ecological impacts of innovation in agriculture is a real challenge: the GM example

2003

All innovation in agriculture constitutes a significant and complex ecological disturbance, even if limited to a single and simple action. Indeed, whatever the nature and objective of the action, a large number of ecological processes are affected and numerous discontinuities may occur within the agro-ecosystem, in both time and space. As the GMO example illustrates, it is not sufficient to focus on direct effect of innovation, it is necessary to forecast mid- and long-term impacts of innovation with respect to the environment. Modelling phenomena appear then to be a key element to achieve this goal.

0106 biological sciencescost benefits balanceecological impactco-existencelcsh:TP670-699010603 evolutionary biology01 natural sciencesBiochemistrygene flow models[SDV.IDA]Life Sciences [q-bio]/Food engineeringGM plantsEconomicsAGRONOMIEInnovationComputingMilieux_MISCELLANEOUSSimple (philosophy)business.industryEcology04 agricultural and veterinary sciences[SDV.IDA] Life Sciences [q-bio]/Food engineeringEnvironmental economicsTerm (time)Action (philosophy)Disturbance (ecology)13. Climate actionAgriculture040103 agronomy & agriculture0401 agriculture forestry and fisherieslcsh:Oils fats and waxesElement (criminal law)businessFood Science
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Resource availability and competition shape the evolution of survival and growth ability in a bacterial community

2013

Resource availability is one of the main factors determining the ecological dynamics of populations or species. Fluctuations in resource availability can increase or decrease the intensity of resource competition. Resource availability and competition can also cause evolutionary changes in life-history traits. We studied how community structure and resource fluctuations affect the evolution of fitness related traits using a two-species bacterial model system. Replicated populations of Serratia marcescens (copiotroph) and Novosophingobium capsulatum (oligotroph) were reared alone or together in environments with intergenerational, pulsed resource renewal. The comparison of ancestral and evol…

0106 biological sciencesecological nichesBACTERIAL BIOFILMSResource (biology)media_common.quotation_subjectScienceAdaptation BiologicalBiologyco-evolutionEnvironment010603 evolutionary biology01 natural sciencesCompetition (biology)Bacterial evolution03 medical and health sciencesSpecies SpecificityAdaptive radiationCopiotrophSerratia marcescens030304 developmental biologymedia_commonEcological niche0303 health sciencesMultidisciplinaryEcologyMicrobiotaQCommunity structureRInterspecific competitionbiology.organism_classificationBiological EvolutionSurvival AnalysisSphingomonadaceaeSerratia marcescens1181 Ecology evolutionary biologyLinear ModelsMedicineMicrobial Interactionsta1181competitionResearch ArticlePLOS ONE
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