Search results for "Molecular"

showing 10 items of 32340 documents

Helminth communities of loggerhead turtles (Caretta caretta) from Central and Western Mediterranean Sea: the importance of host's ontogeny.

2009

We investigated the factors providing structure to the helminth communities of 182 loggerhead sea turtles, Caretta caretta, collected in 6 localities from Central and Western Mediterranean. Fifteen helminth taxa (10 digeneans, 4 nematodes and 1 acanthocephalan) were identified, of which 12 were specialist to marine turtles; very low numbers of immature individuals of 3 species typical from fish or cetaceans were also found. These observations confirm the hypothesis that phylogenetic factors restrict community composition to helminth species specific to marine turtles. There were significant community dissimilarities between turtles from different localities, the overall pattern being compat…

0106 biological sciencesMediterranean climateRange (biology)Molecular Sequence Data010603 evolutionary biology01 natural sciencesLoggerhead sea turtleDNA Mitochondrial030308 mycology & parasitologyPredationHost-Parasite Interactions03 medical and health sciencesMediterranean seaSpecies SpecificityHelminth communityHelminthsMediterranean SeaAnimals14. Life underwaterEcosystem0303 health sciencesCaretta carettabiologyEcologyStomachPelagic zoneSequence Analysis DNAbiology.organism_classificationAnisakisTurtlesIntestinesInfectious DiseasesHabitatLoggerhead sea turtleCyclooxygenase 2OntogenyParasitologySpecies richnessHelminthiasis AnimalParasitology international
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First successful eradication of invasive Norway rats Rattus norvegicus from a small Mediterranean island (Isola delle Femmine, Italy)

2019

Invasive alien species, once introduced, may affect local biodiversity, both directly (e.g. by predation) and indirectly (e.g. by reducing the vegetation cover). Among those, rats (Rodentia, Muridae) are listed among the most invasive species, exerting strong impacts particularly when introduced to island ecosystems. Accordingly, black rats Rattus rattus have been eradicated from a number of islands in the Mediterranean basin to protect breeding seabirds. Where the larger Norway rat Rattus norvegicus is present, extent of damage may be even higher. In our work, we present the results of the first eradication program dealing with Norway rats in a small Mediterranean island (Isola delle Femmi…

0106 biological sciencesMediterranean climatebiologybiological invasions010607 zoologyBiodiversityalien species; biological invasions; Italian wall lizard; vegetal coverZoologyalien speciesmacromolecular substancesSardinian warblerbiology.organism_classification010603 evolutionary biology01 natural sciencesMediterranean BasinInvasive speciesvegetal coverPredationGeographyItalian wall lizardAnimal Science and ZoologyEcosystemEcology Evolution Behavior and SystematicsItalian wall lizardFolia Zoologica
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Image analysis methods for assessment of H2O2 production and Plasmopara viticola development in grapevine leaves: application to the evaluation of re…

2013

article i nfo The grapevine downy mildew (Plasmopara viticola) provokes severe damages and destroys the harvest in the absence of an effective protection. Numerous fungicide treatments are thus generally necessary. To promote a sustainable production, alternative strategies of protection including new antifungal molecules, resistant geno- types or elicitor-induced resistance are under trial. To evaluate the relevance of these strategies, resistance tests are required. In this context, three image analysis methods were developed to read the results of tests performed to assessP.viticolasporulation and mycelial development, and H 2 O 2 production in leaves. They have been validated using elic…

0106 biological sciencesMicrobiology (medical)Antifungalmedicine.drug_class[SDV]Life Sciences [q-bio]H2O2Context (language use)01 natural sciencesMicrobiologyImage analysis03 medical and health sciencesPlasmopara viticolamedicinePlant defense against herbivoryImage Processing Computer-Assisted[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVitisimage analysis;Plasmopara viticola;downy mildew;grapevine;H2O2;resistance testsMolecular Biology[ SDV.MP.MYC ] Life Sciences [q-bio]/Microbiology and Parasitology/MycologyAnalysis method[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biologyDisease ResistancePlant Diseases2. Zero hunger0303 health sciencesResistance (ecology)biologyResistance testsReproducibility of Resultsfood and beveragesHydrogen Peroxidebiology.organism_classificationFungicidePlant LeavesHorticultureAgronomyOomycetesPlasmopara viticola[SDE]Environmental SciencesDowny mildewGrapevine010606 plant biology & botanyDowny mildew
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Analysis of trematode parasite communities in fish eye lenses by pyrosequencing of naturally pooled DNA.

2011

Infections by multiple parasite species are common in nature and have important consequences for between species interactions and coevolutionary dynamics with the host populations. For example ecological and evolutionary factors underlying the structure of parasite communities determine the range of hosts a parasite can infect and set the basis for both evolution of host defences and parasite virulence as well as management of diseases. Studies investigating these factors have been facilitated in the recent past by genetic methods which surmount difficulties of traditional morphological taxonomy in identifying individual parasite species. Here we take a step further and present a novel meth…

0106 biological sciencesMicrobiology (medical)Molecular Sequence DataSnailsZoologyVirulenceTrematode Infections010603 evolutionary biology01 natural sciencesMicrobiologyPolymorphism Single NucleotideHost Specificity03 medical and health sciencesCharadriiformesFish DiseasesReference ValuesDNA Ribosomal SpacerGeneticsParasite hostingAnimals14. Life underwaterMolecular BiologyEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesPrincipal Component AnalysisCommunitybiologyModels Geneticta1183Community structureInterspecific competitionSequence Analysis DNAbiology.organism_classification3. Good healthInfectious DiseasesFreshwater fishPyrosequencingta1181Taxonomy (biology)TrematodaInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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Immunity and the emergence of virulent pathogens.

2013

6 pages; International audience; The emergence/re-emergence of infectious diseases has been one of the major concerns for human and wildlife health. In spite of the medical and veterinary progresses as to prevent and cure infectious diseases, during the last decades we have witnessed the emergence/re-emergence of virulent pathogens that pose a threat to humans and wildlife. Many factors that might drive the emergence of these novel pathogens have been identified and several reviews have been published on this topic in the last years. Among the most cited and recognized drivers of pathogen emergence are climate change, habitat destruction, increased contact with reservoirs, etc. These factor…

0106 biological sciencesMicrobiology (medical)[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyWildlifeVirulenceBiology[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunologyCommunicable Diseases Emerging010603 evolutionary biology01 natural sciencesMicrobiologyParasite diversity03 medical and health sciencesImmune systemDisease severityImmunityImmune-mediated selection[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisGeneticsAnimalsHumansParasites[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology0303 health sciencesVirulenceEcology15. Life on land3. Good healthVaccinationInfectious DiseasesHabitat destruction[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunology13. Climate actionHost-Pathogen InteractionsSpite[SDE.BE]Environmental Sciences/Biodiversity and EcologyImmune-suppression[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Extraction of benzaldehyde from fermentation broth by pervaporation

1996

Abstract The application of pervaporation to extract benzaldehyde produced by microorganisms is considered. A model system was used to study the influence of different parameters and attempts to understand better the mass transfer of this flavour compound. Benzaldehyde was removed from a culture medium from which it was produced by Bjerkandera adusta . The performance of these processes is compared.

0106 biological sciencesMicroorganismFlavourBioengineering02 engineering and technology01 natural sciencesApplied Microbiology and BiotechnologyBiochemistryBenzaldehydechemistry.chemical_compoundBjerkandera adusta010608 biotechnologyMass transfer[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyOrganic chemistry[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyFermentation brothComputingMilieux_MISCELLANEOUSChromatographybiologyChemistryExtraction (chemistry)021001 nanoscience & nanotechnologybiology.organism_classificationPervaporation0210 nano-technology
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Phylogenetic evidence for hybrid origins of asexual lineages in an aphid species

2003

International audience; Understanding the mode of origin of asexuality is central to ongoing debates concerning the evolution and maintenance of sexual reproduction in eukaryotes. This is because it has profound consequences for patterns of genetic diversity and ecological adaptability of asexual lineages, hence on the outcome of competition with sexual relatives both in short and longer terms. Among the possible routes to asexuality, hybridization is a very common mechanism in animals and plants. Aphids present frequent transitions from their ancestral reproductive mode (cyclical parthenogenesis) to permanent asexuality, but the mode of origin of asexual lineages is generally not known bec…

0106 biological sciencesMitochondrial DNAHeterozygoteEvolution of sexual reproduction[SDV]Life Sciences [q-bio]Parthenogenesis010603 evolutionary biology01 natural sciencesAsexualityRhopalosiphum padiEvolution Molecular03 medical and health sciencesReproduction AsexualGeneticsAnimalsCluster AnalysisAllele sequence divergenceHybridizationPhylogenyPolymorphism Single-Stranded ConformationalEcology Evolution Behavior and Systematics030304 developmental biologyGeneticsAphidLikelihood Functions0303 health sciencesbiologyPhylogenetic treeModels GeneticParthenogenesisSequence Analysis DNAbiology.organism_classificationNuclear DNASexual reproductionEvolution of sexAphids[SDE]Environmental SciencesHybridization GeneticGeneral Agricultural and Biological SciencesMicrosatellite Repeats
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Deep divergence and evidence for translocations between Iranian and European populations of the alfalfa weevil (Coleoptera: Curculionidae) based on m…

2016

AbstractThe alfalfa weevil (Hypera postica(Gyllenhal): Coleoptera: Curculionidae) is an invasive pest of alfalfa (Medicago sativaLinnaeus; Fabaceae) in the Holarctic region. Across the wide geographic distribution of the species different local adaptions have been observed. Further, several distinct mitochondrial lineages have been discovered, which have been treated as western and Egyptian/eastern strains. However, our knowledge of the biogeography ofH. posticais largely limited to North American and Japanese populations. We sampled the species from four locations in Iran and two countries in Europe (Poland and Czech Republic) and sequenced the mitochondrial COI gene to detect patterns of …

0106 biological sciencesMitochondrial DNAbiologyPhysiologyved/biologyEcologyWeevilBiogeographyved/biology.organism_classification_rank.speciesZoologyFabaceaebiology.organism_classification010603 evolutionary biology01 natural sciences010602 entomologyHolarcticStructural BiologyInsect ScienceCurculionidaeTaxonomy (biology)Hypera posticaMolecular BiologyEcology Evolution Behavior and SystematicsCanadian Entomologist
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Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

2010

Abstract Background The shell of the pearl-producing bivalve Pinctada margaritifera is composed of an organic cell-free matrix that plays a key role in the dynamic process of biologically-controlled biomineralization. In order to increase genomic resources and identify shell matrix proteins implicated in biomineralization in P. margaritifera, high-throughput Expressed Sequence Tag (EST) pyrosequencing was undertaken on the calcifying mantle, combined with a proteomic analysis of the shell. Results We report the functional analysis of 276 738 sequences, leading to the constitution of an unprecedented catalog of 82 P. margaritifera biomineralization-related mantle protein sequences. Component…

0106 biological sciencesModels MolecularProteomicsProteome[SDV]Life Sciences [q-bio]Proteomics01 natural sciencesContig MappingMantle (mollusc)MargaritiferaIn Situ HybridizationGeneticsExpressed Sequence Tags0303 health sciencesMineralsbiologyPinctada margaritifera[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeBiotechnologyResearch Articlelcsh:QH426-470Sequence analysislcsh:BiotechnologyMolecular Sequence Data010603 evolutionary biology03 medical and health sciencesCalcification Physiologiclcsh:TP248.13-248.65[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]GeneticsAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequencePinctadaRNA Messenger[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/Biomaterials030304 developmental biologyBase SequenceSequence Homology Amino AcidGene Expression ProfilingAnimal StructuresMolecular Sequence AnnotationSequence Analysis DNAbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialslcsh:GeneticsGene Expression RegulationEvolutionary biologyPinctadaBiomineralization
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Molecular Bases for Sensitivity to Tubulin-Binding Herbicides in Green Foxtail

2004

Abstract We investigated the molecular bases for resistance to several classes of herbicides that bind tubulins in green foxtail (Setaria viridis L. Beauv.). We identified two α- and two β-tubulin genes in green foxtail. Sequence comparison between resistant and sensitive plants revealed two mutations, a leucine-to-phenylalanine change at position 136 and a threonine-to-isoleucine change at position 239, in the gene encoding α2-tubulin. Association of mutation at position 239 with herbicide resistance was demonstrated using near-isogenic lines derived from interspecific pairings between green foxtail and foxtail millet (Setaria italica L. Beauv.), and herbicide sensitivity bioassays combine…

0106 biological sciencesModels MolecularSetariaPhysiologyProtein ConformationMolecular Sequence DataSetaria PlantDrug ResistancePlant Sciencemedicine.disease_cause01 natural sciencesTubulin binding[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesFocus Issue on the Plant CytoskeletonSpecies SpecificityTubulin[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsBotanyGeneticsmedicineBioassayAmino Acid SequenceGeneCross-resistancePhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesMutationbiologyBase SequenceSetaria viridisHerbicidesbiology.organism_classificationBiochemistryFoxtail010606 plant biology & botanyProtein Binding
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