Search results for "Mtdna"

showing 10 items of 79 documents

Mitochondrial DNA sequences are present inside nuclear DNA in rat tissues and increase with age

2009

Abstract Mitochondrial DNA (mtDNA) mutations increase with age. However, the number of cells with predominantly mutated mtDNA is small in old animals. Here a new hypothesis is proposed: mtDNA fragments may insert into nuclear DNA contributing to aging and related diseases by alterations in the nucleus. Real-time PCR quantification shows that sequences of cytochrome oxidase III and 16S rRNA from mtDNA are present in highly purified nuclei from liver and brain in young and old rats. The sequences of these insertions revealed that they contain single nucleotide polymorphisms identical to those present in mtDNA of the same animal. Interestingly, the amount of mitochondrial sequences in nuclear …

MaleMitochondrial DNASequence analysisIn situ hybridizationMitochondrionBiologyDNA MitochondrialPolymorphism Single NucleotideChromosomesElectron Transport Complex IVchemistry.chemical_compoundRNA Ribosomal 16SAnimalsCytochrome c oxidaseRats WistarMolecular BiologyIn Situ HybridizationmtDNA control regionAge FactorsBrainSequence Analysis DNACell BiologyMolecular biologyRatsNuclear DNAMutagenesis InsertionalLiverchemistrybiology.proteinMolecular MedicineDNAMitochondrion
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Post-Messinian evolutionary relationships across the Sicilian channel: Mitochondrial and nuclear markers link a new green toad from Sicily to African…

2008

19 páginas, 6 figuras y 3 tables

MalePleistoceneEvolutionAfrica; Animals; Biodiversity; Bufonidae; DNA Mitochondrial; Evolution Molecular; Female; Male; Phylogeny; RNA Ribosomal 16S; SicilyRange (biology)BiogeographyPLEISTOCENESettore BIO/05 - ZoologiaZoologyDNA MitochondrialPHYLOGEOGRAPHYEvolution MolecularRNA Ribosomal 16SDNA POLYMORPHISMMTDNAQH359-425AnimalsSicilyPhylogenyREPTILIAEcology Evolution Behavior and SystematicsmtDNAnDNA green toadSALINITY CRISISmtDNA control regionPOPULATION-GROWTHbiologyBufo balearicusFROGSBiodiversitybiology.organism_classificationBufonidaelanguage.human_languageCOALESCENTPhylogeographyAfricalanguageFemaleBUFO-VIRIDISMediterranean IslandsSicilianResearch ArticleBMC Evolutionary Biology
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Mitochondrial alterations and tendency to apoptosis in peripheral blood cells from children with Down syndrome

2006

Different types of cells from subjects with Down syndrome (DS) have an increased susceptibility to cell death. We have studied apoptosis and mitochondrial (mt) membrane potential (DeltaPsi(m)) in peripheral blood mononuclear cells (PBMC) from DS children and age-matched healthy donors after in vitro treatment with apoptogenic molecules, along with mtDNA content. We found that PBMC from DS and healthy controls had a similar tendency to undergo apoptosis and a similar amount of mtDNA. However, in cells from DS subjects, mitochondria showed a higher loss of DeltaPsi(m), underlying the presence of an increasing susceptibility of these organelles to damaging agents.

MaleProgrammed cell deathMitochondrial DNADown syndromemedicine.medical_specialtyAdolescentDown syndromeBiophysicsApoptosisMitochondrionBiologyIn Vitro TechniquesBiochemistryPeripheral blood mononuclear cellDNA MitochondrialStructural BiologyInternal medicineOrganelleGeneticsmedicineHumansChildMolecular BiologyMembrane Potential MitochondrialmtDNAInfantCell Biologymedicine.diseaseIn vitroMitochondriaEndocrinologyApoptosisCase-Control StudiesChild PreschoolImmunologyLeukocytes MononuclearFemaleFEBS Letters
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Cell line DNA typing in forensic genetics—the necessity of reliable standards

2003

The incorporation of reference DNA is crucial to the validation of any DNA typing protocol. This paper aims to provide a panel of reference DNAs for actual forensic profiling strategies, i.e. autosomal and gonosomal STR typing as well as mtDNA sequencing. We have characterised three human lymphoid cell lines, GM9947, GM9948 and GM3657, and considered 58 autosomal and gonosomal microsatellites as well as the mitochondrial control region sequence. Well-established markers and STRs recently developed for forensic use were involved. K562 DNA samples which we purchased from two different suppliers were also analysed. They revealed conflicting results with regard to the ChrX STR marker genotype. …

MaleQuality ControlmtDNA control regionGeneticsMitochondrial DNAAutosomeGenotypeReference StandardsBiologyDNA FingerprintingDNA MitochondrialPathology and Forensic MedicineDNA profilingTandem Repeat SequencesCell Line TumorForensic profilingGenotypeHumansMicrosatelliteFemaleTypingK562 CellsLawDNA PrimersForensic Science International
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Low Levels of Mitochondrial DNA and Symbiont Diversity in the Worldwide Agricultural Pest, the Greenhouse Whitefly Trialeurodes vaporariorum (Hemipte…

2015

Trialeurodes vaporariorum, the greenhouse whitefly, is a cosmopolitan agricultural pest. Little is known about the genetic diversity of T. vaporariorum and the bacterial symbionts associated with this species. Here, we undertook a large phylogeographic study by investigating both the mitochondrial (mt) diversity and the infection status of 38 T. vaporariorum collections from 18 countries around the world. Genetic diversity of T. vaporariorum was studied by analyzing sequence data from the mt cytochrome oxidase I, cytochrome b, and NADH dehydrogenase subunit 5 genes. Maximum-likelihood (ML) phylogeny reconstruction delineated 2 clades characterized by limited sequence divergence: one clade c…

Malefood.ingredientArsenophonusMolecular Sequence DataZoologyTrialeurodesDNA MitochondrialHemipterafoodSpecies SpecificityGenetic variationBotanyGeneticsAnimalssymbiont communitiesSymbiosisMolecular BiologyPhylogenyGenetics (clinical)ta415Likelihood FunctionsGenetic diversityBacteriaBase SequenceModels GeneticbiologyCytochrome bta1184mtDNA polymorphismGenetic VariationGreenhouse whiteflygenetic diversitySequence Analysis DNAbiology.organism_classificationPhylogeographyta1181Multilocus sequence typingFemaleWolbachiaArsenophonusAnimal DistributionBiotechnologyJournal of Heredity
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Further investigations on populations of the deep-water blue and red shrimp Aristeus antennatus (Risso, 1816) (Decapoda, Dendrobranchiata), as inferr…

2012

The aim of this study was to integrate existing mitochondrial DNA data relating to the deep-sea blue and red shrimp Aristeus antennatus (Risso, 1816) with data obtained by Amplified Fragment Length Polymorphism (AFLP). A total of 145 AFLP polymorphic loci were scored in 236 specimens collected from one Atlantic and seven Mediterranean sample sites. AMOVA results revealed that the overall genetic variation among-populations was lower (11.81%) than within-populations (88.19%). The genetic variation between the Atlantic and Mediterranean samples was found to be not significant ( Φ CT = − 0 . 007 ; N.S.), indicating that the transition area between the Atlantic Ocean and the Mediterranean Sea d…

Mediterranean climateAFLPAFLP; Area atlanto-mediterranea; Aristeus antennatus; Atlanto-Mediterranean region; mtDNAfood.ingredientbiologymtDNADecapodaEcologyArea atlanto-mediterraneaSettore BIO/05 - ZoologiaZoologyDendrobranchiataAquatic ScienceAtlanto-Mediterranean regionbiology.organism_classificationMediterranean BasinAristeus antennatuShrimpMediterranean seafoodGenetic variationAnimal Science and ZoologyAmplified fragment length polymorphismCrustaceana
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Origin and dispersal routes of foreign green and Kemp’s ridley turtles in Spanish Atlantic and Mediterranean water

2014

The presence of the green and Kemp’s ridley turtles is rare at Atlantic and Mediterranean Spanish waters, but the records have increased during the last decades.We reported a new set of records and reviewed all the historical observations of these species. The analysis of a mitochondrial DNA fragment of the newest records provided insights about the origin of the individuals. The Kemp’s ridley turtles arrived from the western Atlantic nesting beaches, although the discovering of a new haplotype suggested the existence of an unknown or low sampled nesting area of origin. Furthermore, the genetic analysis was crucial for the species identification in one specimen, hence recommending the use o…

Mediterranean climateChelonia mydasRare speciesEcologyLepidochelys kempiimtDNARare speciesDispersalBiologySpanish marine turtlesFisheryEastern mediterraneanSpecies identificationBiological dispersalAnimal Science and ZoologyEcology Evolution Behavior and SystematicsMigration
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Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition.

2012

9 páginas, 4 figuras, 3 tablas.

Mediterranean climateGene FlowGenetic SpeciationBiologyOceanographic discontinuitiesPopulation structureDNA MitochondrialGene flowElectron Transport Complex IVMediterranean seaDepth distributionDecapodaGeneticsMediterranean SeaAnimalsMolecular BiologyAtlantic OceanEcology Evolution Behavior and SystematicsPhylogenymtDNAEcologyGenetic VariationLast Glacial MaximumSequence Analysis DNAbiology.organism_classificationCrustaceanPhylogeographyPhylogeographyHaplotypesGlaciationsLiocarcinus depuratorGlobal biodiversityMolecular phylogenetics and evolution
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The Pillars of Hercules as a bathymetric barrier to gene flow promoting isolation in a global deep-sea shark (Centroscymnus coelolepis).

2015

Catarino, Diana ... et. al.-- 19 pages, 5 figures, 4 tables, data accessibility http://dx.doi.org/10.5061/dryad.ss368, supporting information http://dx.doi.org/10.1111/mec.13453

Mediterranean climateGene FlowMaleGenotypePopulationMediterraneanPopulation structureDNA MitochondrialIsolationMediterranean seaCentroscymnus coelolepisGenetic driftGeneticsMediterranean SeaAnimals14. Life underwatereducationAtlantic OceanEcology Evolution Behavior and SystematicsmtDNA control regioneducation.field_of_studyPacific OceanbiologyEcologySequence Analysis DNAbiology.organism_classificationBiological EvolutionBarriers to dispersalGenetic divergenceGenetics PopulationDeep-sea sharkSharksBiological dispersalFemaleMicrosatellite RepeatsMolecular ecology
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Genetic architecture of the marbled goby Pomatoschistus marmoratus (Perciformes, Gobiidae) in the Mediterranean Sea

2011

The marbled goby Pomatoschistus marmoratus, a species inhabiting coastal Mediterranean lagoons, has been studied by measuring its mitochondrial DNA variation. This analysis revealed a Mediterranean west vs east split and, subsequently, an eastern differentiation among the Libyan–Tunisian Gulf, the Adriatic Sea and the Aegean Sea. The high cohesion between the samples collected in the vast area of western Mediterranean contrasts with the genetic mosaic of the more sub-structured eastern Mediterranean. This western homogeneity can not yet be fully explained even if a human-mediated migratory flow, due to a maritime traffic, has been posited. The pattern in the eastern basin revealed a genetic…

Mediterranean climateMarbled gobySettore BIO/05 - ZoologiaDNA MitochondrialPerciformesPomatoschistusEvolution MolecularMediterranean seaGeneticsMediterranean SeaAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsPomatoschistus marmoratus mtDNA Phylogeography Siculo-Tunisian strait Adriatic Sea Aegean Sea Lagoon habitat molecular marker Pomatoschistus marmoratus Mediterranean SeabiologyEcologyGenetic VariationSequence Analysis DNAbiology.organism_classificationPerciformesFisheryPhylogeographyGenetics PopulationHabitatHaplotypesGenetic structureHydrography
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