Search results for "NSC"

showing 10 items of 5810 documents

Transcriptional responses of Medicago truncatula upon sulfur deficiency stress and arbuscular mycorrhizal symbiosis

2014

International audience; Sulfur plays an essential role in plants' growth and development and in their response to various abiotic and biotic stresses despite its leachability and its very low abundance in the only form that plant roots can uptake (sulfate). It is part of amino acids, glutathione (GSH), thiols of proteins and peptides, membrane sulfolipids, cell walls and secondary products, so reduced availability can drastically alter plant growth and development. The nutritional benefits of symbiotic interactions can help the plant in case of S deficiency. In particular the arbuscular mycorrhizal (AM) interaction improves N, P and S plant nutrition, but the mechanisms behind these exchang…

0106 biological sciencesRhizophagus irregularisS deficiencyTranscription Genetic[SDV]Life Sciences [q-bio]FungusPlant Sciencelcsh:Plant culture01 natural sciencesAM interactionrhizophagus irregularissulfur deficiencyTranscriptomeCell wall03 medical and health sciencesBotanymedicago truncatula;transcriptome;S deficiency;AM interaction;rhizophagus irregularis[SDV.BV]Life Sciences [q-bio]/Vegetal Biologylcsh:SB1-1110Original Research ArticleGene030304 developmental biology2. Zero hungerAbiotic component0303 health sciencescarencebiologyarbuscular mycorrhizafungifood and beveragesmedicago truncatulabiology.organism_classificationMedicago truncatulaArbuscular Mycorrhizal Symbiosis[SDE]Environmental SciencesPlant nutritionnutrition soufréetranscriptome010606 plant biology & botany
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus

2020

Introduction. Following on from work on the European bryophyte Red List, the taxonomically and nomenclaturally updated spreadsheets used for that project have been expanded into a new checklist for the bryophytes of Europe. Methods. A steering group of ten European bryologists was convened, and over the course of a year, the spreadsheets were compared with previous European checklists, and all changes noted. Recent literature was searched extensively. A taxonomic system was agreed, and the advice and expertise of many European bryologists sought. Key results. A new European checklist of bryophytes, comprising hornworts, liverworts and mosses, is presented. Fifteen new combinations are propo…

0106 biological sciencesSYSTEMATIC POSITIONLibrary sciencePlant Science010603 evolutionary biology01 natural sciencesmosseshornwortsGENUS RICCIA MARCHANTIALESPHYLOGENETIC-RELATIONSHIPSIUCN Red ListInternal transcribed spacerSP-NOV ORTHOTRICHACEAEEcology Evolution Behavior and SystematicsCHLOROPLAST DNA-SEQUENCESBryophytesIBERIAN PENINSULAChecklistliverwortsEuropeINTERNAL TRANSCRIBED SPACERGeographyWork (electrical)1181 Ecology evolutionary biologyMOSS FAMILY BRYACEAEMORPHOLOGICAL EVOLUTIONBryophytechecklist010606 plant biology & botanyTAXONOMIC REVISION
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Parasite-induced behavioral change: mechanisms.

2010

Animal behavior and parasitism are more tightly linked than commonly thought. One of the most astonishing phenomena in host–parasite antagonistic interactions is ‘host manipulation,’ that is, the ability of a parasite to alter the behavior of its host in ways that appear to increase parasite fitness at the expense of host fitness. The mechanisms by which a parasite hijacks the behavior of its host have been explored using ethopharmacological and immunocytochemical approaches or carrying out a large-scale proteomic study on manipulated host’s brain. These few mechanistic studies have confirmed both the complexity of host manipulation by parasites and the importance of understanding the molec…

0106 biological sciencesSerotonin[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyProteomeParasitismBiologyBioinformatics010603 evolutionary biology01 natural sciencesRodentsTranscriptome03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hosting[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAnimal behavior030304 developmental biology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyHost (biology)Phenotype3. Good healthCrustaceansNeuromodulatorInsectsParasiteEvolutionary biologyProteome[SDE.BE]Environmental Sciences/Biodiversity and EcologyEthopharmacologyTranscriptome[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Downscaling rice yield simulation at sub-field scale using remotely sensed LAI data

2019

Abstract Crop modeling and remote sensing are key tools to gain deeper understanding on cropping system dynamics and, ultimately, to increase the sustainability of agricultural productions. This study presents a system to estimate rice yields at sub-field scale based on the integration of a biophysical model and remotely sensed products. Leaf area index (LAI) data derived from decametric optical imageries (i.e., Landsat-8, Landsat-7 and Sentinel–2A) were assimilated into the WARM rice model via automatic recalibration of crop parameters at a fine spatial resolution (30 m × 30 m), targeting the lowest error between simulated and remotely sensed LAI. The performance of the system was evaluate…

0106 biological sciencesSoil SciencePlant Science01 natural sciencesYield (wine)WARM modelCrop modelLeaf area indexCropping systemDecision support systemRemote sensing2. Zero hungerCrop yieldYield predictions04 agricultural and veterinary sciencesRemote sensing15. Life on landAgronomyData assimilation040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental sciencePrecision agricultureScale (map)Agronomy and Crop ScienceCropping010606 plant biology & botanyDownscalingEuropean Journal of Agronomy
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New Insights into the Systematics of the Schoenoxiphium Clade (Carex, Cyperaceae)

2017

The Spanish Ministry of Science and Technology supported this research through the project CGL2012-38744 and CGL2016- 77401-P to M. Luceño (Principal Investigator), E. Maguilla, M. Escudero, S. Martín-Bravo, and T. Villaverde and an FPU fellowship (AP2012-2189) from the Spanish Government (Ministry of Education, Culture, and Sport) and a Synthesys grant (GB-TAF-2523) by the European Community Research Infrastructure Program to E.Maguilla.

0106 biological sciencesSystematicsSpecies complexCarexPlant ScienceBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesExternal transcribed spacerMonophylySpecies complexPhylogeneticsBotanyInternal transcribed spacerITSCladeEcology Evolution Behavior and SystematicsPhylogeny010606 plant biology & botanyETSTaxonomy
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Transcription of two blue copper-binding protein isogenes is highly correlated with arbuscular mycorrhizal development in Medicago truncatula.

2010

International audience; Expression profiling of two paralogous arbuscular mycorrhizal (AM)-specific blue copper-binding gene (MtBcp1a and MtBcp1b) isoforms was performed by real-time quantitative polymerase chain reaction in wild-type Medicago truncatula Jemalong 5 (J5) during the mycorrhizal development with Glomus intraradices for up to 7 weeks. Time-course analysis in J5 showed that expression of both MtBcp1 genes increased continuously and correlated strongly with the colonization intensity and arbuscule content. MtPT4, selected as a reference gene of the functional plant-fungus association, showed a weaker correlation to mycorrhizal development. In a second experiment, a range of mycor…

0106 biological sciencesTranscription GeneticPhysiologyGLOMUS INTRARADICESMutantMolecular Sequence Data01 natural sciences03 medical and health sciencesTranscription (biology)Gene Expression Regulation PlantBLUE COPPER-BINDINGMYCRORHIZE ARBUSCULAIREMycorrhizaeGene expressionBotanyMedicago truncatulaProtein Isoforms[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyRELATION PLANTE-MICROORGANISMEMycorrhizaGenePhylogeny030304 developmental biologyPlant Proteins2. Zero hunger0303 health sciencesbiologyfungiGeneral Medicinebiology.organism_classificationMolecular biologyMedicago truncatulaGene expression profilingReal-time polymerase chain reactionCarrier ProteinsAgronomy and Crop Science010606 plant biology & botanyMolecular plant-microbe interactions : MPMI
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Diversity and distribution of Phytophthora species in protected natural areas in Sicily

2019

: The aim of this study was to investigate the occurrence, diversity, and distribution of Phytophthora species in Protected Natural Areas (PNAs), including forest stands, rivers, and riparian ecosystems, in Sicily (Italy), and assessing correlations with natural vegetation and host plants. Fifteen forest stands and 14 rivers in 10 Sicilian PNAs were studied. Phytophthora isolations from soil and stream water were performed using leaf baitings. Isolates were identified using both morphological characters and sequence analysis of the internal transcribed spacer (ITS) region. A rich community of 20 Phytophthora species from eight phylogenetic clades, including three new Phytophthora taxa, was …

0106 biological sciencesVegetation type01 natural sciencesInvasive species030308 mycology & parasitology03 medical and health sciencesNatural ecosystemsNatural ecosystemVegetation typeEcosystemInternal transcribed spacerBaitingRiparian zone0303 health sciencesgeographygeography.geographical_feature_categorybiologyInvasive speciesSoilborne pathogenEcologyfungiInvasive specieITS regionfood and beveragesForestrylcsh:QK900-989Vegetationbiology.organism_classificationBaiting; Invasive species; ITS region; Natural ecosystems; Soilborne pathogens; Streams; Vegetation type; ForestrySoilborne pathogensTaxonStreamslcsh:Plant ecologyStreamPhytophthora010606 plant biology & botany
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Real-time reverse transcription polymerase chain reaction development for rapid detection of Tomato brown rugose fruit virus and comparison with othe…

2019

Background Tomato brown rugose fruit virus (ToBRFV) is a highly infectious tobamovirus that causes severe disease in tomato (Solanum lycopersicum L.) crops. In Italy, the first ToBRFV outbreak occurred in 2018 in several provinces of the Sicily region. ToBRFV outbreak represents a serious threat for tomato crops in Italy and the Mediterranean Basin. Methods Molecular and biological characterisation of the Sicilian ToBRFV ToB-SIC01/19 isolate was performed, and a sensitive and specific Real-time RT-PCR TaqMan minor groove binder probe method was developed to detect ToBRFV in infected plants and seeds. Moreover, four different sample preparation procedures (immunocapture, total RNA extractio…

0106 biological sciencesVeterinary medicinelcsh:MedicineFast detectionMicrobiology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyConserved sequence03 medical and health sciencesVirologyTaqManPRODUCCION VEGETALAgricultural Science030304 developmental biology2. Zero hunger0303 health sciencesbiologyInoculationRT-qPRCGeneral Neurosciencelcsh:ROutbreakSettore AGR/12 - Patologia Vegetalefood and beveragesTobamovirusGeneral Medicinebiology.organism_classificationToBRFV3. Good healthReverse transcription polymerase chain reactionPrimer (molecular biology)SolanumGeneral Agricultural and Biological Sciences010606 plant biology & botanyPeerJ
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Comparative analyses of caste, sex, and developmental stage‐specific transcriptomes in two Temnothorax ants

2020

Abstract Social insects dominate arthropod communities worldwide due to cooperation and division of labor in their societies. This, however, makes them vulnerable to exploitation by social parasites, such as slave‐making ants. Slave‐making ant workers pillage brood from neighboring nests of related host ant species. After emergence, host workers take over all nonreproductive colony tasks, whereas slavemakers have lost the ability to care for themselves and their offspring. Here, we compared transcriptomes of different developmental stages (larvae, pupae, and adults), castes (queens and workers), and sexes of two related ant species, the slavemaker Temnothorax americanus and its host Temnoth…

0106 biological sciencesZoologydevelopmental stagesBiology010603 evolutionary biology01 natural sciences590 Tiere (Zoologie)transcriptomics03 medical and health sciencescasteddc:590lcsh:QH540-549.5Ecology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape Conservation0303 health sciencesLarvaEcologyTemnothoraxHost (biology)fungiInterspecific competitionTemnothorax americanusbiology.organism_classificationBroodPupagene expressionslave‐making antsddc:590lcsh:Ecologycaste developmental stages gene expression slave-making ants transcriptomicsArthropodEcology and Evolution
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