Search results for "Nome"
showing 10 items of 24600 documents
The gypsy database (GyDB) of mobile genetic elements: release 2.0
2011
This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…
Next-generation biological control
2020
Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Nex…
Taxonomic and Phylogenetic Investigations on Psoralea Acaulis (Psoraleeae: Fabaceae) With the Description of A New Genus Kartalinia
2018
Salmeri, Cristina/0000-0002-5261-590X WOS: 000454161300003 Psoralea acaulis Hoffm. is a very peculiar and taxonomically isolated species of the tribe Psoraleeae, occurring in the Caucasian territories. Currently, this tribe contains 10 distinct genera, well differentiated morphologically. Due to some morphological similarities, P. acaulis was attributed to Bituminaria Heist ex Fabr., a genus with a Mediterranean-Macaronesian distribution. However, as it has many characters, some of which are autapomorphic, it was assigned its own subgenus: Christevenia Barneby ex C. H. Stirt. In light of detailed cladistic and phylogenetic analyses, this arrangement is taxonomically questionable and rather …
Taxonomic investigations on Psoralea palaestina (Fabaceae), a critical species of Mediterranean flora
2016
Psoralea palaestina is a critical and unappreciated species described from Palestinian territories, and currently treated as synonym of P. bituminosa, nowadays known as Bituminaria bituminosa. Nomenclatural investigations allowed to ascertain that it was validly described for the first time by Bassi (1768) and not by Gouan (1773), as previously thought. Extensive taxonomic investigations revealed that this very peculiar legume is morphologically well differentiated from the other allied known species. Therefore, it has to be properly treated at specific level and transferred to the genus Bituminaria, thus proposing a new combination: Bituminaria palaestina. Based on literature, herbarium an…
A comparative study of Ural Owl Strix uralensis breeding season diet within its European breeding range, derived from nest box monitoring schemes
2018
Capsule: Voles are the main prey of the Ural Owl Strix uralensis in Europe, with larger prey and higher prey diversity being positively associated with owl breeding performance. Aims: To assess the breeding diet and its influence on the breeding performance of the Ural Owl across a north–south gradient of its European range using nest box monitoring data. Methods: Comparable monitoring of nest boxes in different biogeographical regions of Europe (Finland, Latvia, Slovenia) and diet analysis from nest samples to assess the taxonomic and trait influence of prey on owl breeding performance in different environments. Results: High plasticity in the Ural Owl hunting behaviour under different pre…
Grass leaves as potential hominin dietary resources
2018
Discussions about early hominin diets have generally excluded grass leaves as a staple food resource, despite their ubiquity in most early hominin habitats. In particular, stable carbon isotope studies have shown a prevalent C4 component in the diets of most taxa, and grass leaves are the single most abundant C4 resource in African savannas. Grass leaves are typically portrayed as having little nutritional value (e.g., low in protein and high in fiber) for hominins lacking specialized digestive systems. It has also been argued that they present mechanical challenges (i.e., high toughness) for hominins with bunodont dentition. Here, we compare the nutritional and mechanical properties of gra…
Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
2013
International audience; The mutualistic symbiosis involving Glomeromycota, a distinctive phylum of early diverging Fungi, is widely hypothesized to have promoted the evolution of land plants during the middle Paleozoic. These arbuscular mycorrhizal fungi (AMF) perform vital functions in the phosphorus cycle that are fundamental to sustainable crop plant productivity. The unusual biological features of AMF have long fascinated evolutionary biologists. The coenocytic hyphae host a community of hundreds of nuclei and reproduce clonally through large multinucleated spores. It has been suggested that the AMF maintain a stable assemblage of several different genomes during the life cycle, but thi…
Engineering CRISPR guide RNA riboswitches for in vivo applications
2019
CRISPR-based genome editing provides a simple and scalable toolbox for a variety of therapeutic and biotechnology applications. Whilst the fundamental properties of CRISPR proved easily transferable from the native prokaryotic hosts to eukaryotic and multicellular organisms, the tight control of the CRISPR-editing activity remains a major challenge. Here we summarise recent developments of CRISPR and riboswitch technologies and recommend novel functionalised synthetic-gRNA (sgRNA) designs to achieve inducible and spatiotemporal regulation of CRISPR-based genetic editors in response to cellular or extracellular stimuli. We believe that future advances of these tools will have major implicati…
Implications of the EFSA Scientific Opinion on Site Directed Nucleases 1 and 2 for Risk Assessment of Genome-Edited Plants in the EU
2021
Genome editing is a set of techniques for introducing targeted changes in genomes. It may be achieved by enzymes collectively called site-directed nucleases (SDN). Site-specificity of SDNs is provided either by the DNA binding domain of the protein molecule itself or by RNA molecule(s) that direct SDN to a specific site in the genome. In contrast to transgenesis resulting in the insertion of exogenous DNA, genome editing only affects specific endogenous sequences. Therefore, multiple jurisdictions around the world have exempted certain types of genome-edited organisms from national biosafety regulations completely, or on a case-by-case basis. In the EU, however, the ruling of the Court of J…
Carbon metabolic rates and GHG emissions in different wetland types of the Ebro Delta
2020
Deltaic wetlands are highly productive ecosystems, which characteristically can act as C-sinks. However, they are among the most threatened ecosystems, being very vulnerable to global change, and require special attention towards its conservation. Knowing their climate change mitigating potential, conservation measures should also be oriented with a climatic approach, to strengthen their regulatory services. In this work we studied the carbon biogeochemistry and the specific relevance of certain microbial guilds on carbon metabolisms of the three main types of deltaic wetlands located in the Ebro Delta, north-eastern Spain, as well as how they deal with human pressures and climate change ef…