Search results for "Nucleophile"

showing 10 items of 385 documents

Novel examples of the N-methyl effect on cyclisations of N-Boc derivatives of amino alcohols. A theoretical study

2004

New examples of the N-methyl effect on the cyclisation of N-tert-butoxycarbonyl derivatives of amino alcohols are reported. Ab initio studies for the displacement step with formation of the five-membered heterocycle indicate that the increase of the nucleophile character of the carbonyl oxygen of the carbamate group with the N-methyl substitution is responsible for the acceleration of the cyclisation step.

CarbamateNucleophileStereochemistryChemistrymedicine.medical_treatmentOrganic ChemistryDrug DiscoveryThorpe–Ingold effectAb initiomedicineBiochemistryTetrahedron
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Synthesis of Multisubstituted 1,4-Dihydrobenzoxazin-2-ones through a One-Pot Nucleophilic N-Alkylation/C-Alkylation of Cyclic α-Imino Esters

2017

A nucleophilic N-alkylation of 2-oxobenzoxazine-2-carboxylates with organozinc reagents with good selectivities and in moderate to good yields is described. Moreover, the synthesis of multisubstituted 1,4-dihydrobenzoxazine-2-ones bearing a tetrasubstituted carbon atom via a one-pot N-alkylation/C-alkylation reactions is reported.

Carbon atom010405 organic chemistryChemistryOrganic Chemistrychemistry.chemical_elementZincAlkylation010402 general chemistry01 natural sciencesCatalysis0104 chemical sciencesUmpolungReaccions químiquesCompostos orgànics SíntesiNucleophileOne pot reactionReagentOrganic chemistrylipids (amino acids peptides and proteins)Química orgànica
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Linking Electrostatic Effects and Protein Motions in Enzymatic Catalysis. A Theoretical Analysis of Catechol O-Methyltransferase

2014

The role of protein motions in enzymatic catalysis is the subject of a hot scientific debate. We here propose the use of an explicit solvent coordinate to analyze the impact of environmental motions during the reaction process. The example analyzed here is the reaction catalyzed by catechol O-methyltransferase, a methyl transfer reaction from S-adenosylmethionine (SAM) to the nucleophilic oxygen atom of catecholate. This reaction proceeds from a charged reactant to a neutral product, and then a large electrostatic coupling with the environment could be expected. By means of a two-dimensional free energy surface, we show that a large fraction of the environmental motions needed to attain the…

CatecholSubstrate (chemistry)ProteinsElectrostatic couplingCatalysisSurfaces Coatings and FilmsEnzyme catalysisCatalysisEnzymesSolventchemistry.chemical_compoundElectrostatic effectNucleophilechemistryComputational chemistryScientific methodMaterials ChemistryPhysical chemistryTransmission coefficientPhysical and Theoretical ChemistryProteïnesFisicoquímica
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A Versatile and Convenient Method for the Functionalization of Porphyrins

2001

International audience; The condensation of 3-(chloromethyl)benzoyl chloride with different atropisomers of meso-(tetra-o-aminophenyl)porphyrin (TAPP), followed by the reaction of a series of nucleophilic reagents leads, among others, to precursors of biomimetic models of heme proteins such as cytochrome c oxidase (CcO). This synthesis can also be applied as an efficient two-step reaction to obtain highly functionalized porphyrin derivatives potentially useful for cation binding.

Cation bindingAtropisomerHemeproteinPorphyrinsChemistryEnzyme modelsOrganic ChemistryPorphyrinCombinatorial chemistry[ CHIM ] Chemical SciencesHeme proteinschemistry.chemical_compoundBenzoyl chlorideNucleophileReagentCationspolycyclic compounds[CHIM]Chemical SciencesOrganic chemistrySurface modificationPhysical and Theoretical ChemistryOxidoreductases
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Applications of the Conceptual Density Functional Theory Indices to Organic Chemistry Reactivity.

2016

Indexación: Web of Science Theoretical reactivity indices based on the conceptual Density Functional Theory (DFT) have become a powerful tool for the semiquantitative study of organic reactivity. A large number of reactivity indices have been proposed in the literature. Herein, global quantities like the electronic chemical potential μ, the electrophilicity ω and the nucleophilicity N indices, and local condensed indices like the electrophilic and nucleophilic Parr functions, as the most relevant indices for the study of organic reactivity, are discussed. http://www.mdpi.com/1420-3049/21/6/748

Chemical PhenomenaNucleophilicityChemistry OrganicPharmaceutical ScienceElectronsnucleophilicityReview010402 general chemistry01 natural sciencesreactivity indicesAnalytical ChemistryMolecular electron density theorylcsh:QD241-441Reactivity indicesNucleophilelcsh:Organic chemistryconceptual DFTParr functionsComputational chemistryDrug DiscoveryOrganic chemistryReactivity (chemistry)Physical and Theoretical ChemistryElectrophilicity010405 organic chemistryChemistryOrganic Chemistrymolecular electron density theory0104 chemical sciencesChemistry (miscellaneous)Conceptual DFTElectrophileMolecular MedicineQuantum TheoryDensity functional theoryelectrophilicityMolecules (Basel, Switzerland)
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1,3-Dipolar cycloaddition of diaryldiazomethanes across N-ethoxy-carbonyl-N-(2,2,2-trichloroethylidene)amine and reactivity of the resulting 2-azabut…

2016

Abstract 1,3-dipolar cycloaddition of diaryldiazomethanes Ar2C N2 across Cl3C–CH N–CO2Et 1 yields Δ3-1,2,4-triazolines 2. Thermolysis of 2 leads, via transient azomethine ylides 3, to diaryldichloroazabutadienes [Ar(Ar')C N–CH CCl2] 4. Treatment of 4a (Ar = Ar' = C6H5) and 4c (Ar = Ar' = p-ClC6H4) with NaSR in DMF yields 2-azabutadienes [Ar2C N–C(H) C(SR)2] 5. In contrast, nucleophilic attack of NaStBu on 4 affords azadienic dithioethers [Ar2C N–C(StBu) C(H)(StBu)] (7a Ar = C6H5; 7b Ar' = p-ClC6H4). The reaction of 4a with NaSEt conducted in neat EtSH produces [Ph2C N–C(H)(SEt)–CCl2H] 8, which after dehydrochloration by NaOMe and subsequent addition of NaSEt is converted to [Ph2C N–C(SEt) C…

Chemistry(all)StereochemistryGeneral Chemical Engineering124-TriazolineCrystal structure010402 general chemistry01 natural sciencesMedicinal chemistrychemistry.chemical_compoundThioetherNucleophile[CHIM]Chemical SciencesReactivity (chemistry)ThioetherCycloadditionComputingMilieux_MISCELLANEOUS2-Azabutadienes010405 organic chemistryGeneral ChemistryCycloaddition0104 chemical sciences3. Good healthchemistry13-Dipolar cycloadditionAzomethine ylidesChemical Engineering(all)Alkoxy groupPiperidineCopperMacrocyclic complexComptes Rendus Chimie
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A theoretical and experimental study of the formation mechanism of 4-X-chalcones by the Claisen–Schmidt reaction

2000

Abstract A theoretical and experimental study on the formation of 4-X-chalcones (X=H, Cl, F, OCH3, N(CH3)2) was carried out by the Claisen–Schmidt reaction. The influence of pH and temperature was analyzed. Under the adopted experimental conditions 4-X-chalcones were the only reaction products. In the theoretical study, the thermodynamic magnitudes and the reactivity indexes calculated with the AM1 method were used. The mechanism of Nayak and Rout was analyzed critically and a new mechanism was proposed, characterized by: (1) rapid nucleophilic attack of the catalyst (OH−) on the carbon atom of the methyl group of acetophenone; (2) attacks of the acetophenonate ion on the carbon atom of the…

ChemistryCondensed Matter PhysicsBiochemistryReaction rateElimination reactionchemistry.chemical_compoundReaction rate constantNucleophileComputational chemistrySchmidt reactionReactivity (chemistry)Physical and Theoretical ChemistryEquilibrium constantMethyl groupJournal of Molecular Structure: THEOCHEM
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Understanding the local reactivity in polar organic reactions through electrophilic and nucleophilic Parr functions

2013

[EN] Building upon our recent studies devoted to the bonding changes in polar reactions [RSC Advances, 2012, 2, 1334 and Org. Biomol. Chem., 2012, 10, 3841], we propose herein two new electrophilic, P-k(+), and nucleophilic, P-k(-), Parr functions based on the spin density distribution at the radical anion and at the radical cation of a neutral molecule. These local functions allow for the characterisation of the most electrophilic and nucleophilic centres of molecules, and for the establishment of the regio- and chemoselectivity in polar reactions. The proposed Parr functions are compared with both, the Parr-Yang Fukui functions [J. Am. Chem. Soc. 1984, 106, 4049] based on frontier molecul…

ChemistryGeneral Chemical EngineeringExchangeGeneral ChemistryMoleculesDFTBond-formationDensittyIndexNucleophileRadical ionOrganic reactionComputational chemistryDiels-alder reactionElf analysisElectrophileLocalization functionMolecular orbitalChemoselectivityMulliken population analysis13-DipolarDiels–Alder reaction
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Understanding the mechanism of the Povarov reaction. A DFT study

2014

The molecular mechanism of the Povarov reaction in acetonitrile has been studied at the MPWB1K/6-311G** level of theory. This reaction follows a domino process that comprises two sequential reactions: (i) a Lewis acid catalysed aza-Diels–Alder (A-DA) reaction between a N-aryl imine and a nucleophilic ethylene yielding a formal [4 + 2] cycloadduct; (ii) a stepwise 1,3-hydrogen shift at this intermediate affording the final tetrahydroquinoline. At this computational level, the Lewis acid catalysed A-DA reaction presents a two-step mechanism as a consequence of the large stabilisation of the corresponding zwitterionic intermediate. Our study allows establishing that the N-aryl substituent has …

ChemistryGeneral Chemical EngineeringImineGeneral ChemistryPhotochemistryReaction rateElimination reactionchemistry.chemical_compoundNucleophileComputational chemistryStepwise reactionReactivity (chemistry)Povarov reactionLewis acids and basesRSC Advances
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A molecular electron density theory (MEDT) study of the role of halogens (X2= F2, Cl2, Br2and I2) on the aza-Michael-addition reactions

2020

Using the Molecular Electron Density Theory (MEDT), a set of uncatalyzed and X2 molecule-catalyzed (X2 = F2, Cl2, Br2, or I2) aza Michael addition reactions (aza-MARs) between pyrrolidine (PYR) and methyl acrylate (MA) have been studied in the gas phase and in dichloromethane (DCM) medium from the kinetics and molecular mechanism aspects. Analysis of the conceptual DFT reactivity indices indicates that the coordination of the X2 molecules to the oxygen of the MA's carbonyl group increases both the softness and the electrophilic character of MA, thus explaining the catalytic role of the X2 molecules. The nucleophilic attack of the nitrogen of PYR on the MA's β conjugated carbon is the rate-d…

ChemistryGeneral ChemistryTautomerMedicinal chemistryCatalysisCatalysischemistry.chemical_compoundReaction rate constantNucleophileMaterials ChemistryMichael reactionReactivity (chemistry)Lewis acids and basesMethyl acrylateNew Journal of Chemistry
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