Search results for "ODI"

showing 10 items of 17052 documents

Large Spatial Scale of the Phenotype-Environment Color Matching in Two Cryptic Species of African Desert Jerboas (Dipodidae: Jaculus)

2014

We tested the camouflage hypothesis, or the linkage between animal (Saharan rodent) and habitat coloration, on the largest geographical scale yet conducted. We aimed to determine whether phenotypic variation is explained by micro-habitat variation and/or genetic polymorphism to determine 1) the strength of linkage between fur color and local substrate color, and 2) the divergence in fur coloration between two genetic clades, representing cryptic species, throughout the complete range of the African desert jerboas (Jaculus jaculus). We used a combination of museum and field-collected specimens, remote sensing tools, satellite and digital photography and molecular genetic and phylogenetic met…

0106 biological sciencesRange (biology)Skin Pigmentation01 natural sciencesDipodidaeJaculus jaculusGeoinformaticsPhylogeny0303 health sciencesMultidisciplinaryRemote Sensing ImageryPhylogenetic treeEcologyGeographyPigmentationQRCytochromes cBiological EvolutionPhenotypeSympatric speciationMedicineResearch ArticleSpecies complexComputer and Information SciencesScienceZoologyRodentiaBiologyEnvironment010603 evolutionary biology03 medical and health sciencesGenetic variationAnimalsSelection Genetic030304 developmental biologyEvolutionary BiologySpatial AnalysisPolymorphism GeneticEcology and Environmental SciencesBiology and Life SciencesGenetic Variation15. Life on landbiology.organism_classificationGenetic divergenceHaplotypesEvolutionary EcologyRemote Sensing TechnologyEarth Sciencesta1181HairPlos One
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Response of soil mites (Acari, Mesostigmata) to long-term Norway spruce plantation along a mountain stream

2018

During the nineteenth and twentieth centuries, coniferous monocultures were introduced, replacing natural broadleaved forests in Central Europe, mainly for economic benefits. In the mountains, Norway spruce [Picea abies (L.) H. Karst] was introduced in large areas previously covered with beech forests and also in natural riverside habitat corridors such as river valleys, despite its negative impact on the soil environment by e.g. organic matter accumulation, decrease of soil pH and changes in C/N ratio. We aimed to check how long-term Norway spruce plantations affect species richness and diversity of soil mites along a mountain river in former mixed and broadleaved forests. The study, based…

0106 biological sciencesRare speciesForests010603 evolutionary biology01 natural sciencesArticleSoilCommon speciesMiteAnimalsPiceaBeechRiverMitesEcologybiologyEcologyPicea abiesAltitudeSpecies diversityMite assemblagesForestryPicea abiesBiodiversity04 agricultural and veterinary sciencesGeneral MedicineRiparian forestsbiology.organism_classificationUnderstory biomassAnimal ecologyInsect Science040103 agronomy & agriculture0401 agriculture forestry and fisheriesPolandSpecies richnessExperimental and Applied Acarology
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Quantifying and addressing the prevalence and bias of study designs in the environmental and social sciences

2020

Building trust in science and evidence-based decision-making depends heavily on the credibility of studies and their findings. Researchers employ many different study designs that vary in their risk of bias to evaluate the true effect of interventions or impacts. Here, we empirically quantify, on a large scale, the prevalence of different study designs and the magnitude of bias in their estimates. Randomised designs and controlled observational designs with pre-intervention sampling were used by just 23% of intervention studies in biodiversity conservation, and 36% of intervention studies in social science. We demonstrate, through pairwise within-study comparisons across 49 environmental da…

0106 biological sciencesResearch designScientific communitySCIENTIFIC COMMUNITYMedio ambiente naturalsosiaalitieteetPsychological interventionGeneral Physics and AstronomySocial SciencesQH7501 natural sciencesEnvironmental impact//purl.org/becyt/ford/1 [https]010104 statistics & probability/706/648CredibilityPrevalenceSocial scienceComputingMilieux_MISCELLANEOUSGEMultidisciplinaryEcologyQarticleSampling (statistics)Biodiversitynäyttöön perustuvat käytännötsatunnaistetut vertailukokeetENVIRONMENTAL IMPACTResearch designResearch DesignScale (social sciences)[SDE]Environmental SciencesH1ScienceEnvironment010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologySocial sciencesBiastutkimusmenetelmätQH541/704/172/4081Humans0101 mathematics//purl.org/becyt/ford/1.6 [https]ympäristötieteetpoliittinen päätöksentekoClinical study designmetodologia/706/689General Chemistry15. Life on landEcologíaLiteraturePairwise comparisonObservational study/631/158luotettavuusBias; Biodiversity; Ecology; Environment; Humans; Literature; Prevalence; Research Design; Social SciencesNature Communications
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A molecular-based identification resource for the arthropods of Finland

2022

Publisher Copyright: © 2021 The Authors. Molecular Ecology Resources published by John Wiley & Sons Ltd. To associate specimens identified by molecular characters to other biological knowledge, we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report the creation of a comprehensive reference library of DNA barcodes for the arthropods of an entire country (Finland), (2) publish this library, and (3) deliver a new identification tool for insects and spiders, as based on this resource. The reference library contains mtDNA COI barcodes for 11,275 (43%) of 26,437 arthropod species known from Finland, including 10,811 (45%) of 23,956 insect species. To quantify the…

0106 biological sciencesResource (biology)DNA barcodesspecies identificationBiodiversityreference libraryarthropodsBiologyBarcodeProbabilistic taxonomic assignment010603 evolutionary biology01 natural scienceslaw.inventionCoiCOI03 medical and health sciencessymbols.namesakeProtaxlawprobabilistic taxonomic assignmentniveljalkaisetGeneticsAnimalsDNA Barcoding TaxonomicSpecies identificationArthropodsSpecies identificationFinlandEcology Evolution Behavior and SystematicsGene Library030304 developmental biology0303 health sciencesDNA-analyysiPROTAXsystematiikka (biologia)Linnaean taxonomyReference libraryBiodiversityGeographyEvolutionary biologyDna barcodes1181 Ecology evolutionary biologysymbolsidentificationlajinmääritysIdentification (biology)Biotechnology
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Ecological dependencies make remote reef fish communities most vulnerable to coral loss

2021

Ecosystems face both local hazards, such as over-exploitation, and global hazards, such as climate change. Since the impact of local hazards attenuates with distance from humans, local extinction risk should decrease with remoteness, making faraway areas safe havens for biodiversity. However, isolation and reduced anthropogenic disturbance may increase ecological specialization in remote communities, and hence their vulnerability to secondary effects of diversity loss propagating through networks of interacting species. We show this to be true for reef fish communities across the globe. An increase in fish-coral dependency with the distance of coral reefs from human settlements, paired with…

0106 biological sciencesRichnessconservation biologyekologiset verkostotGeneral Physics and Astronomy01 natural sciencesConservation of Natural ResourceAnthropogenic EffectmeriekologiaPatterns0303 health sciencesDiversityMultidisciplinaryConservation biologyCoral ReefsAnthropogenic EffectsQClimate-change ecologyFishesBiodiversityAnthozoaHabitat1181 Ecology evolutionary biologyCoral ReefHumanclimate-change ecologyConservation of Natural Resources[SDE.MCG]Environmental Sciences/Global ChangesScienceClimate ChangeBiotic interactions010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyArticlekoralliriutat03 medical and health sciencesAnimals; Anthozoa; Anthropogenic Effects; Biodiversity; Climate Change; Conservation of Natural Resources; Coral Bleaching; Fishes; Humans; Spatial Analysis; Coral ReefsFood-webAnimalsHumansecological networks14. Life underwater030304 developmental biologySpatial AnalysisCoral BleachingAnimalkalakannatGeneral ChemistryDisturbanceSpatial Analysiilmastonmuutokset15. Life on landbiodiversiteetti13. Climate actionEcological networks[SDE.BE]Environmental Sciences/Biodiversity and EcologyFisheNature Communications
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A revision of the typification of some names in the seagrass genera Amphibolis, Cymodocea, Halodule and Syringodium (Cymodoceaceae)

2020

The typification of eight names of species currently included in the family Cymodoceaceae is revised in order to contribute to their nomenclatural stability. The previously designated lectotype of Ruppia antarctica Labill. (≡ Amphibolis antarctica (Labill.) Sond. & Asch.) is cited. Lectotypes are designated here for Zostera nodosa Ucria (≡ Cymodocea nodosa (Ucria) Asch.), Cymodocea rotundata Asch. & Schweinf., Caulinia serrulata R. Br. (≡ Cymodocea serrulata (R. Br.) Asch. & Magnus), Halodule bermudensis Hartog, Diplanthera pinifolia Miki (≡ H. pinifolia (Miki) Hartog) and Cymodocea isoetifolia Asch. (≡ Syringodium isoetifolium (Asch.) Dandy). A neotype is designated here for Z. uninervis F…

0106 biological sciencesRuppiabiologyCymodocea nodosaPlant ScienceHalodulebiology.organism_classification010603 evolutionary biology01 natural sciencesSyringodiumCymodoceaBotanyCymodoceaceaeTypificationAmphibolisEcology Evolution Behavior and Systematics010606 plant biology & botanyWilldenowia
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Implications of the EFSA Scientific Opinion on Site Directed Nucleases 1 and 2 for Risk Assessment of Genome-Edited Plants in the EU

2021

Genome editing is a set of techniques for introducing targeted changes in genomes. It may be achieved by enzymes collectively called site-directed nucleases (SDN). Site-specificity of SDNs is provided either by the DNA binding domain of the protein molecule itself or by RNA molecule(s) that direct SDN to a specific site in the genome. In contrast to transgenesis resulting in the insertion of exogenous DNA, genome editing only affects specific endogenous sequences. Therefore, multiple jurisdictions around the world have exempted certain types of genome-edited organisms from national biosafety regulations completely, or on a case-by-case basis. In the EU, however, the ruling of the Court of J…

0106 biological sciencesSDN-2SDN-1Mutagenesis (molecular biology technique)Computational biology01 natural sciencesGenomegenome-edited organismlcsh:Agriculture03 medical and health sciencesBiosafetyGenome editingsite-directed nucleasegenetically modified organismJustice (ethics)EFSA opinion030304 developmental biology0303 health sciencesScope (project management)business.industrylcsh:SFood safetyDirectiveBusinessAgronomy and Crop Science010606 plant biology & botanyAgronomy
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Prediction of germination rates of weed species: Relationships between germination speed parameters and species traits

2011

International audience; In fields, the timing of weed emergence flushes is mostly related to the timing and rate of seed germination, which depend on seed dormancy level, soil temperature and water potential conditions as well as soil tillage and crop sowing date. Seed germination parameters are essential in weed dynamics models to account for the effects of soil conditions on weed demography. Since these parameters are difficult to measure, our objective was to test the possibility of estimating them from easily accessible information. Seed germination parameters (germination lag-time, time to mid-germination and mid-germination rate) were measured or collected from the literature for 25 w…

0106 biological sciencesSEEDGERMINATION RATEAREA TO MASS RATIOBiology01 natural sciencesCropSoil temperatureLIPID CONTENTBASE TEMPERATUREGERMINATION LAGDORMANCYEcological ModelingSeed dormancySowingfood and beverages04 agricultural and veterinary sciences15. Life on landAgronomyGerminationLipid content040103 agronomy & agriculture0401 agriculture forestry and fisheriesDormancy[SDE.BE]Environmental Sciences/Biodiversity and EcologyWeed010606 plant biology & botany
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Erosion of Lizard Diversity by Climate Change and Altered Thermal Niches

2010

It is predicted that climate change will cause species extinctions and distributional shifts in coming decades, but data to validate these predictions are relatively scarce. Here, we compare recent and historical surveys for 48 Mexican lizard species at 200 sites. Since 1975, 12% of local populations have gone extinct. We verified physiological models of extinction risk with observed local extinctions and extended projections worldwide. Since 1975, we estimate that 4% of local populations have gone extinct worldwide, but by 2080 local extinctions are projected to reach 39% worldwide, and species extinctions may reach 20%. Global extinction projections were validated with local extinctions o…

0106 biological sciencesSELECTIONMaleAcclimatizationPopulation DynamicsBiodiversityUNCERTAINTY01 natural sciencesGlobal WarmingBody TemperaturePhylogeny0303 health sciencesMultidisciplinarybiologyGeographyEcologyECTOTHERMSReproductionTemperatureLizardsBiodiversityEXTINCTION RISKBiological EvolutionGeographyEctothermFemaleSeasonsClimate ChangeClimate changePREDICTIONSECOLOGYExtinction Biological010603 evolutionary biologyModels Biological03 medical and health sciencesbiology.animalAnimalsEcosystemSelection GeneticPHYSIOLOGYMexicoEcosystem030304 developmental biologyEcological nicheExtinctionLizardGlobal warmingEVOLUTION13. Climate action[SDE.BE]Environmental Sciences/Biodiversity and EcologyForecasting
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Carbon metabolic rates and GHG emissions in different wetland types of the Ebro Delta

2020

Deltaic wetlands are highly productive ecosystems, which characteristically can act as C-sinks. However, they are among the most threatened ecosystems, being very vulnerable to global change, and require special attention towards its conservation. Knowing their climate change mitigating potential, conservation measures should also be oriented with a climatic approach, to strengthen their regulatory services. In this work we studied the carbon biogeochemistry and the specific relevance of certain microbial guilds on carbon metabolisms of the three main types of deltaic wetlands located in the Ebro Delta, north-eastern Spain, as well as how they deal with human pressures and climate change ef…

0106 biological sciencesSalinityTopographyMarsh010504 meteorology & atmospheric sciencesMethanogensMarine and Aquatic SciencesFresh WaterWetlandChenopodiaceaeCarbon sequestrationPhysical Chemistry01 natural sciencesSoilRNA Ribosomal 16SSoil MicrobiologySedimentary GeologyMultidisciplinarygeography.geographical_feature_categoryEcologyEcologyMicrobiotaQREukaryotaAgricultureGeologyPlanktonChemistrySalt marshPhysical SciencesDelta EcosystemsMedicineMethaneResearch ArticleFreshwater EnvironmentsCarbon SequestrationClimate ChangeScienceMarshes574EcosystemsWetland EcosystemsGreenhouse GasesRiversAnimalsEcosystemPetrology0105 earth and related environmental sciencesLandformsgeographyBrackish water010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsAquatic EnvironmentsBiology and Life SciencesGeomorphologyNutrientsCarbon DioxideInvertebratesArchaeaCarbonSalinityChemical PropertiesSpainWetlandsEarth SciencesMetagenomeEnvironmental scienceSedimentEutrophicationPLOS ONE
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