Search results for "Open"

showing 10 items of 3963 documents

A non-venomous sPLA2 of a lepidopteran insect: Its physiological functions in development and immunity

2018

Eicosanoids are oxygenated C20 polyunsaturated fatty acids that mediate various physiological processes in insects. Eicosanoid biosynthesis begins with a C20 precursor, arachidonic acid (5,8,11,14-eicosatetraenoic acid: AA). AA is usually released from phospholipids at sn-2 position by catalytic activity of phospholipase A2 (PLA2). Although various PLA2s classified into 16 gene families (= Groups) are known in various biological systems, few PLA2s are known in insects. Only two PLA2s involved in intracellular calcium independent PLA2 (iPLA2) group have been identified in lepidopteran insects with well known eicosanoid physiology. This study reports the first secretory PLA2 (sPLA2) in lepido…

0106 biological sciences0301 basic medicineCellular immunitybiologyfungiImmunologySpodopterabiology.organism_classification01 natural sciences010602 entomology03 medical and health sciencesOpen reading framechemistry.chemical_compound030104 developmental biologyPhospholipase A2BiochemistrychemistryJuvenile hormoneExiguabiology.proteinlipids (amino acids peptides and proteins)Arachidonic acidPeptide sequenceDevelopmental BiologyDevelopmental & Comparative Immunology
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Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication.

2015

Mitochondrial DNA sequences, often in combination with nuclear markers and morphological data, are frequently used to unravel the phylogenetic relationships, population dynamics and biogeographic histories of a plethora of organisms. The information provided by examining complete mitochondrial genomes also enables investigation of other evolutionary events such as gene rearrangements, gene duplication and gene loss. Despite efforts to generate information to represent most of the currently recognized groups, some taxa are underrepresented in mitochondrial genomic databases. One such group is leeches (Annelida: Hirudinea: Clitellata). Herein, we expand our knowledge concerning leech mitochon…

0106 biological sciences0301 basic medicineClitellatalcsh:MedicineBiochemistry01 natural sciencesGenomeDatabase and Informatics MethodsRNA TransferGene DuplicationGene OrderInvertebrate GenomicsGene duplicationAnnelidslcsh:SciencePhylogenyEnergy-Producing OrganellesData ManagementGeneticseducation.field_of_studyMultidisciplinaryPhylogenetic treePhylogenetic AnalysisGenomicsGenomic DatabasesMitochondriaNucleic acidsPhylogeneticsGenes MitochondrialPlacobdella parasiticaCellular Structures and OrganellesTransfer RNAResearch ArticleComputer and Information SciencesMitochondrial DNAPopulationBioenergeticsBiologyResearch and Analysis Methods010603 evolutionary biologyEvolution MolecularOpen Reading Frames03 medical and health sciencesPhylogeneticsLeechesGeneticsAnimalsEvolutionary Systematics14. Life underwaterCodonMolecular Biology TechniquesNon-coding RNAeducationMolecular BiologyTaxonomyMolecular Biology Assays and Analysis TechniquesEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesComputational BiologyCell BiologyGenome Analysisbiology.organism_classificationInvertebratesBiological Databases030104 developmental biologyAnimal GenomicsGenome MitochondrialRNAlcsh:QPLoS ONE
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Selenium biofortification and grafting modulate plant performance and functional features of cherry tomato grown in a soilless system

2021

Abstract Selenium (Se) is an essential trace element for humans due to its importance in a number of enzymes. Vegetable grafting is a valuable tool to overcome biotic and/or abiotic issues and to increase vigour, yield traits and fruit quality. The present work aimed at testing both different Se concentrations (0.0, 1.0, 2.0 and 4.0 μmol Se L−1) supplied via fertigation and grafting on cherry tomato in soilless culture. Se at 2.0 μmol L−1 improved total fruit yield by 60.0 % and 31.4 % in ungrafted and grafted plants, respectively as compared to the control. Marketable yield was positively affected by Se-biofortification and grafting. Se at 2.0 μmol L−1 improved N use efficiency by 60.3 % a…

0106 biological sciences0301 basic medicineFunctional attributeBiofortificationHorticulture01 natural sciences03 medical and health scienceschemistry.chemical_compoundDry weightCherry tomatoCarotenoidchemistry.chemical_classificationbiologyfood and beveragesSe-biofortificationSolanum lycopersicum L.Hydroponicsbiology.organism_classificationAscorbic acidGraftingHealth-promoting compoundLycopeneHorticulture030104 developmental biologychemistryRootstock010606 plant biology & botanyScientia Horticulturae
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Open data and digital morphology

2017

International audience; Over the past two decades, the development of methods for visualizing and analysing specimens digitally, in three and even four dimensions, has transformed the study of living and fossil organisms. However, the initial promise that the widespread application of such methods would facilitate access to the underlying digital data has not been fully achieved. The underlying datasets for many published studies are not readily or freely available, introducing a barrier to verification and reproducibility, and the reuse of data. There is no current agreement or policy on the amount and type of data that should be made available alongside studies that use, and in some cases…

0106 biological sciences0301 basic medicineLife Sciences & Biomedicine - Other TopicsDYNAMICSComputer scienceDatasets as TopicReuse01 natural sciencesFOSSILSthree-dimensional modelsNaturvetenskapData CurationGeneral Environmental ScienceEcologypalaeontology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]70General Medicine11 Medical And Health SciencesCCbiomechanics Keywords: digital dataOpen dataPerspectiveComputer data storage[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeneral Agricultural and Biological SciencesNatural SciencesLife Sciences & BiomedicineDatasets as Topic1001TISSUESphenotypeBest practiceDigital dataLibrary science25Environmental Sciences & Ecology010603 evolutionary biologyBiological Science DisciplinesGeneral Biochemistry Genetics and Molecular BiologyQA76functional analysisSet (abstract data type)03 medical and health sciencesPALEONTOLOGYBiologySubject Category: Morphology and biomechanics Subject Areas: evolutionvisualizationdigital dataEvolutionary BiologyScience & TechnologyTOMOGRAPHIC MICROSCOPYMorphology and BiomechanicsGeneral Immunology and Microbiologybusiness.industryResearchQHReproducibility of Resultscomputed tomographyPERFORMANCE06 Biological Sciences144Data scienceEVOLUTIONVisualization030104 developmental biologyVISUALIZATION07 Agricultural And Veterinary SciencesbusinessProceedings of the Royal Society B: Biological Sciences
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Multiple shifts to open habitats in Melastomateae (Melastomataceae) congruent with the increase of African Neogene climatic aridity

2018

International audience; AimAfrican Melastomateae (Melastomataceae) comprise c. 185 species occurring in closed or open habitats throughout sub-Saharan Africa. We sought to reconstruct biogeographical and habitat history, and shifts in diversification rates of African Melastomateae using a well-sampled, dated molecular phylogeny.LocationAmericas, sub-Saharan Africa, Madagascar, SE Asia.TaxonAngiosperms, Melastomataceae, African Melastomateae.MethodsPhylogenetic relationships were estimated based on an extensive sampling of New and Old World Melastomateae, using two nuclear and three plastid markers. Divergence times were estimated in BEAST based on three calibration priors under Bayesian unc…

0106 biological sciences0301 basic medicineOld WorlddiversificationMelastomataceaeBiogeography[SDV]Life Sciences [q-bio]divergence timeNeogene010603 evolutionary biology01 natural sciences03 medical and health sciencesopen habitatsclosed habitats[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEcology Evolution Behavior and Systematicsbiogeographyhabitat shiftsEcologybiologyEcology15. Life on landbiology.organism_classification030104 developmental biologyGeographyTaxonHabitatMolecular phylogeneticsAfricaMelastomataceaeBiological dispersalNeogenegrassland
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Trichoderma harzianum Strain T22 Modulates Direct Defense of Tomato Plants in Response to Nezara viridula Feeding Activity

2021

AbstractPlant growth-promoting fungi belonging to genus Trichoderma are known to help plants when dealing with biotic stressors by enhancing plant defenses. While beneficial effects of Trichoderma spp. against plant pathogens have long been documented, fewer studies have investigated their effect on insect pests. Here, we studied the impact of Trichoderma root colonization on the plant defense responses against stink bug feeding attack. For this purpose, a model system consisting of tomato plant, Solanum lycopersicum cv Dwarf San Marzano, Trichoderma harzianum strain T22 and the southern green stink bug, Nezara viridula, was used. We firstly determined stink bug performance in terms of rela…

0106 biological sciences0301 basic medicineTime FactorsTranscription GeneticGreen stink bugBeneficial soil microbes Jasmonic acid signaling pathway Pentatomidae Solanum lycopersicum Stink bugsCyclopentanesGenes PlantPlant Roots01 natural sciencesBiochemistryArticleHeteroptera03 medical and health scienceschemistry.chemical_compoundSolanum lycopersicumGene Expression Regulation PlantPentatomidaePlant defense against herbivoryAnimalsHerbivoryOxylipinsSymbiosisStink bugsEcology Evolution Behavior and SystematicsbiologyBeneficial soil microbesJasmonic acidfungifood and beveragesTrichoderma harzianumGeneral MedicinePentatomidaebiology.organism_classificationHorticulture030104 developmental biologychemistryNezara viridulaJasmonic acid signaling pathwayTrichodermaHypocrealesSeedsFemaleSolanumSignal Transduction010606 plant biology & botany
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Polyamine Oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress to…

2017

The family of polyamine oxidases (PAO) in Arabidopsis (AtPAO1-5) mediates polyamine (PA) back-conversion, which reverses the PA biosynthetic pathway from spermine, and its structural isomer thermospermine (tSpm), into spermidine and then putrescine. Here, we have studied the involvement of PA back-conversion in Arabidopsis salinity tolerance. AtPAO5 is the Arabidopsis PAO gene member most transcriptionally induced by salt stress. Two independent loss-of-function mutants (atpao5-2 and atpao5-3) were found to exhibit constitutively higher tSpm levels, with associated increased salt tolerance. Using global transcriptional and metabolomic analyses, the underlying mechanisms were studied. Stimul…

0106 biological sciences0301 basic medicineTranscription GeneticArabidopsis thalianaPhysiologyArabidopsisSperminePlant ScienceSodium Chloride01 natural scienceschemistry.chemical_compoundGene Expression Regulation PlantLoss of Function MutationArabidopsisPolyaminesMetabolitesArabidopsis thalianaPoliaminesAbscisic acidPrincipal Component AnalysisbiologyAgricultural SciencesSalt ToleranceMetabòlitsmetabolomicsPhenotypeBiochemistryMultigene FamilyMetabolomeCitric Acid CycleSalsCyclopentanes03 medical and health sciencesStress PhysiologicalOxylipinsRNA MessengerIonssalt toleranceArabidopsis ProteinsGene Expression ProfilingSodiumHydrogen PeroxideAgriculture Forestry and Fisheriesbiology.organism_classificationSpermidineGene Ontology030104 developmental biologychemistrythermosperminePutrescineSpermineSaltsOxidoreductases Acting on CH-NH2 Group DonorsTranscriptomejasmonatesPolyaminePolyamine oxidaseAbscisic Acid010606 plant biology & botany
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Extending the Shelf Life of White Peach Fruit with 1-Methylcyclopropene and Aloe arborescens Edible Coating

2020

The maintenance of high-quality standards for prolonging the shelf life of fruit and preserving sensory and nutritional quality is a priority for horticultural products. The aim of this work is to test the effectiveness of a single treatment of edible coating based on Aloe arborescens (EC) and a combined treatment of 1-methylcycyclopropene (1-MCP) and edible coating to prolong the shelf life of &ldquo

0106 biological sciences<i>Prunus persica</i>OrganolepticCold storageTitratable acidPlant Science1-MethylcyclopropeneShelf life01 natural scienceschemistry.chemical_compound0404 agricultural biotechnologyAloe arborescenslcsh:Agriculture (General)consumer acceptabilityPrunus persicabio-compound contentbiologyChemistryFleshfood and beverages1-methylcycyclopropeneRipening04 agricultural and veterinary sciencesbiology.organism_classificationpost-harvest qualitylcsh:S1-972040401 food scienceSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeHorticultureAloe sppedible coatingAgronomy and Crop Science010606 plant biology & botanyFood Science
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Effects of 1-Methylcyclopropene on postharvest quality traits, antioxidant activity and ascorbic acid content of mature-ripe mango fruits

2017

Introduction - Mango (Mangifera indica L.) is a climacteric fruit, very sensitive to prolonged storage with a relatively short postharvest life. The aim of this study was to investigate the effects of 1-MCP treatment on the pomological and sensory traits, antioxidant capacity and ascorbic acid content in late ripening mature-ripe mango fruits submitted to a simulated shelf life at 20 degrees C. Materials and methods - Mango late ripening fruits (cv. Keitt) were harvested from a commercial orchard, located at Furiano, province of Messina (Sicily, Italy; 38 degrees 3'N, 14 degrees 33'E; 5 m a.s.l.). Fruits were treated with 1-MCP (0.005 kg m(-3)) for 20 h in 1 m(3) closed containers and then …

0106 biological sciencesAntioxidantmango1-MCPmedicine.medical_treatmentTitratable acidHorticulture1-Methylcyclopropene01 natural sciencesSensory analysis040501 horticulturesensory analysischemistry.chemical_compoundSoluble solidsmedicineMediterranean regionphysicochemical characteristicChemistryfruit qualityMangifera indica04 agricultural and veterinary sciencesAscorbic acidHorticulturePostharvestCrop quality0405 other agricultural sciencesAgronomy and Crop Science010606 plant biology & botanyFood Science
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Ectomycorrhizal fungi in wood-pastures : Communities are determined by trees and soil properties, not by grazing

2019

Traditional rural biotopes such as wood-pastures are species-rich environments that have been created by low-intensity agriculture. Their amount has decreased dramatically during the 20th century in whole Europe due to the intensification of agriculture. Wood-pastures host some fungal species that prefer warm areas and are adapted to semi-open conditions, but still very little is known about fungi in these habitats. We studied how management, historical land-use intensity, present grazing intensity, time since abandonment, and stand conditions affect the species richness and community composition of ectomycorrhizal fungi. We surveyed fruit bodies on three 10 m × 10 m study plots in 36 sites…

0106 biological sciencesBiotopesemi-naturalforest pasturessemi-openBiology010603 evolutionary biology01 natural sciencesBasal areaSoil pHGrazingmykorritsasienetmetsälaitumetWater contentEcologyEcology04 agricultural and veterinary sciencesBorealHabitat040103 agronomy & agriculture0401 agriculture forestry and fisheriesta1181Animal Science and ZoologySpecies richnesstraditional rural biotopesperinnebiotooppisienetAgronomy and Crop ScienceAgriculture, Ecosystems and Environment
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