Search results for "OxyR"

showing 10 items of 216 documents

Differences between cysteine and homocysteine in the induction of deoxyribose degradation and DNA damage.

2001

The effect of two naturally occurring thiols, such as cysteine and homocysteine, has been examined for their ability to induce deoxyribose degradation and DNA damage. Copper(II) ions have been added to incubation mixtures and oxygen consumption measurements have been performed in order to correlate the observed damaging effects with the rate of metal catalyzed thiol oxidation. Ascorbic acid plus copper has been used as a positive control of deoxyribose and DNA oxidation due to reactive oxygen species. Cysteine or homocysteine in the presence of copper ions induce the degradation of deoxyribose and the yield of 8-hydroxy-2'-deoxyguanosine (8-OHdG), although important differences are observed…

DNA damageAscorbic AcidThymus GlandBiochemistrySuperoxide dismutasechemistry.chemical_compoundOxygen ConsumptionPhysiology (medical)DeoxyguanosineAnimalsCysteineHomocysteineElectrophoresis Agar GelbiologyDeoxyriboseSuperoxide DismutaseThiourea8-Hydroxy-2'-deoxyguanosineDeoxyguanosineDNA oxidationAscorbic acidCatalasechemistryDeoxyriboseBiochemistry8-Hydroxy-2'-DeoxyguanosineSpectrophotometrybiology.proteinCattleReactive Oxygen SpeciesOxidation-ReductionCopperCysteineDNA DamageFree radical biologymedicine
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Comparison of DNase, DNA-polymerase and RNA-polymerase activities present in the DNA-bindung proteins of normal human dermis, epidermis, horny layer …

1978

DNA-binding proteins (DBP) of normal human dermis, epidermis, horny layer and psoriatic scales represent a tissue-specific group of mostly nuclear nonhistone proteins. To analyse their function, the different DBP fractions were examined concerning the presence of DNase, DNA-polymerase and RNA-polymerase activities. DBP of normal epidermis and horny layer contain four different DNases. One DNase of both DBP fractions is active only at pH 5.0. Three DNases of epidermal DBP are active at a pH-range from 5.0--8.5, while the corresponding DNases of horny layer-DBP are most active at pH 7.4. Probably these DNases have changed their pH-optimum during keratinisation. DBP of psoriatic scales include…

DNA polymeraseDNA-Directed DNA PolymeraseDermatologychemistry.chemical_compoundNon-histone proteinDermisRNA polymerasemedicineHumansPsoriasisSkinchemistry.chemical_classificationThymidine monophosphateDeoxyribonucleasesEpidermis (botany)biologyIsoelectric focusingProteinsDNA-Directed RNA PolymerasesGeneral MedicineElectrophoresis DiscMolecular biologyEnzyme Activationmedicine.anatomical_structureEnzymechemistrybiology.proteinEpidermisIsoelectric FocusingProtein Bindingcirculatory and respiratory physiologyArchives of Dermatological Research
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Characterization of Different Deoxyribonucleases in Human Lymphocytes

1975

Abstract Deoxyribonucleases, Disc Electrophoresis, Lymphocytes Four groups of deoxyribonuclease activities from human lymphocytes have been characterized by deoxyribonuclease assay in DNA-containing polyacrylamide gels following their separation by disc-electrophoresis. All activities hydrolyse DNA endonucleolytically. One neutral deoxyribo­ nuclease found in the cytoplasmic fraction prefers native or UV-irradiated DNA over denatured DNA as substrate and is a 5′-monoester former. Two groups of acid deoxyribonuclease activities are detectable in the nuclear fraction. Both are 3′-monoester formers. One is as well active with denatured DNA as with native DNA, the other one shows the same activ…

DNA BacterialCytoplasmUltraviolet RaysPolyacrylamideNucleic Acid DenaturationGeneral Biochemistry Genetics and Molecular Biologychemistry.chemical_compoundHydrolysismedicineHumansLymphocytesCell NucleusDeoxyribonucleasesSubstrate (chemistry)DeoxyribonucleaseDNAHydrogen-Ion ConcentrationElectrophoresis DiscRadiation Effectsmedicine.anatomical_structurechemistryBiochemistryCytoplasmDeoxyribonucleasesNucleusDNAZeitschrift für Naturforschung C
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Pulsed-field gel electrophoresis for the discrimination of Oenococcus oeni isolates from different wine-growing regions in Germany

2008

Reliable techniques are needed for the identification individual Oenococcus oeni strains with desirable flavor characteristics and to monitor the survival and contribution of inoculated and indigenous bacteria. Therefore, we investigated the suitability of pulsed-field gel electrophoresis (PFGE) for the discrimination of 65 O. oeni isolates from six different wine-producing regions in Germany. Among the restriction enzymes tested, genomic DNA digestions with Sfi I were most effective by displaying 56 (86%) different banding profiles. Our results underline the high capacity of PFGE for strain identification and differentiation. Cluster analysis of the DNA restriction patterns revealed no dis…

DNA BacterialGel electrophoresisWineStrain (biology)WineHigh capacityGeneral MedicineBiologybiology.organism_classificationMicrobiologyElectrophoresis Gel Pulsed-FieldMicrobiologyGram-Positive CocciRestriction enzymegenomic DNASpecies SpecificityGermanyFermentationPulsed-field gel electrophoresisCluster AnalysisFood scienceDeoxyribonucleases Type II Site-SpecificPhylogenyFood ScienceOenococcus oeniInternational Journal of Food Microbiology
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A chromosome map of the Flavescence dorée phytoplasma

2008

International audience; The Flavescence dorée phytoplasma (FD-P), a non-cultivable, plant-pathogenic bacterium of the class Mollicutes, is the causal agent of a quarantine disease affecting vineyards of southern Europe, mainly in southern France and northern Italy. To investigate FD-P diversity and phytoplasma genetic determinants governing the FD-P life cycle, a genome project has been initiated. A physical map of the chromosome of FD-P strain FD92, purified from infected broad beans, was constructed by performing restriction digests of the chromosome and resolving the fragments by PFGE. Single and double digestions of the chromosome with the enzymes SalI, BssHII, MluI and EagI were perfor…

DNA BacterialPhytoplasmaBACTERIOLOGIEMolecular Sequence DataCARTOGRAPHIE GENETIQUEMicrobiologyRestriction fragmentFLAVESCENCE DOREEMALADIE DES PLANTES03 medical and health sciencesBacterial ProteinsMOLLICUTEDeoxyribonucleases Type II Site-Specific030304 developmental biologySouthern blotGenetics0303 health sciencesbiology030306 microbiologyChromosomeFabaceaeGenes rRNASequence Analysis DNAGenome projectGENETIQUEPhysical Chromosome Mappingbiology.organism_classificationElectrophoresis Gel Pulsed-FieldBlotting SouthernRestriction site[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyItalyPHYTOPLASME DE LA FLAVESCENCE DOREEPhytoplasmabiology.proteinMollicutesCARTE CHROMOSOMIQUEFranceRRNA Operon
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Characterisation of rpsL, rrs and embB mutations associated with streptomycin and ethambutol resistance in Mycobacterium tuberculosis.

2003

In order to characterise molecular mechanisms of first-line drug resistance in Mycobacterium tuberculosis and to evaluate the use of molecular markers of resistance (gene point mutations), we analysed 66 multi-drug-resistant (MDR) isolates from Latvian tuberculosis patients. They were all resistant to rifampin (RIF), isoniazid (INH) and streptomycin (SM), and 33 were resistant to ethambutol (EMB). Enzymatic digestion by MboII and nucleotide sequencing of the rpsL gene fragment detected a single nucleotide substitution K43R in 40 (61%) of the 66 SM-resistant M. tuberculosis isolates. Of the other 26 SM-resistant isolates, 16 (24%) had mutations at positions 513A--C and 516C--T of the rrs gen…

DNA BacterialRibosomal ProteinsDrug resistanceGene mutationMicrobiologyPolymerase Chain ReactionMycobacterium tuberculosisAnti-Infective AgentsDrug Resistance Multiple BacterialRNA Ribosomal 16SmedicineHumansTuberculosisDeoxyribonucleases Type II Site-SpecificMolecular BiologyEthambutolPolymorphism Single-Stranded ConformationalAntibacterial agentGeneticsbiologyPoint mutationSingle-strand conformation polymorphismGeneral MedicineMycobacterium tuberculosisSequence Analysis DNAbiology.organism_classificationMolecular biologyStreptomycinStreptomycinEthambutolmedicine.drugResearch in microbiology
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Assessment of Salmonella spp. in feces, cloacal swabs, and eggs (eggshell and content separately) from a laying hen farm.

2011

Microbial pathogens of the genus Salmonella are among the leading causes of foodborne illness in the world. The present study was done on a laying hen farm with a Salmonella enterica serovar Enteritidis-positive result according to the testing specified by European regulation 2160/2003. The aim of this study was to compare the Salmonella contamination on a laying hen farm with the Salmonella presence in the hen eggs. The strains were isolated by ISO method 6579:2002 (standard method for the detection of Salmonella spp. in the European regulation for food and animal feeding stuffs, animal feces, and environmental samples from the primary production stage, including poultry farms) and were co…

DNA BacterialVeterinary medicineSalmonellaSalmonella enteritidisEggsmedicine.disease_causeEgg ShellFecesAnimal scienceCloacamedicinemedia_common.cataloged_instanceFood microbiologyAnimalsEuropean UnionEuropean unionEggshellDeoxyribonucleases Type II Site-SpecificFecesPoultry Diseasesmedia_commonSalmonella Infections AnimalChi-Square Distributionbiologybusiness.industryGeneral MedicinePoultry farmingbiology.organism_classificationElectrophoresis Gel Pulsed-FieldSalmonella enteritidisSalmonella entericaFood MicrobiologyAnimal Science and ZoologyFemalebusinessChickensPoultry science
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Microdisc-electrophoretic study of deoxyribonucleases in cow snout epidermis

1983

Acid and neutral deoxyribonucleases (DNases) of the cow snout epidermis were investigated by the microdisc-electrophoresis of polyacrylamide gels containing highly polymerized DNA and by isoelectric focusing techniques. The nucleases were characterized with respect to their pH optimum. An acid DNase at pH 5.0 was detected as a single distinct band after the electrophoretic separation. After isoelectric focussing also, only one acid DNase activity with an isoelectric point (IP) of 6.2 was detectable. Neutral DNases at pH 7.4 were demonstrated as major and minor bands by their different electrophoretic mobilities. In the isoelectric focusing system also, two neutral DNases, a major one (IP, 4…

DeoxyribonucleasesChromatographyEpidermis (botany)Isoelectric focusingPolyacrylamideDNADermatologyGeneral MedicineNoseElectrophoresis Discchemistry.chemical_compoundElectrophoresisIsoelectric pointchemistryBiochemistryAnimalsCattleFemaleEpidermisIsoelectric FocusingDeoxyribonucleasesSnoutDNAArchives of Dermatological Research
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A rapid separation of the four major deoxynucleosides and deoxyinosine by high-pressure liquid cation-exchange chromatography

1973

DeoxyribonucleasesChromatographyIon exchangePhosphoric Diester HydrolasesVenomsChemistryDeoxyribonucleotidesIon chromatographyBiophysicsPhosphoric Diester HydrolasesDeoxyribonucleosidesDNACell BiologyAlkaline PhosphataseChromatography Ion ExchangeBiochemistryMicrococcusHigh pressureMethodsPressureMolecular BiologyNucleic acid analogueAnalytical Biochemistry
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Specificity of deoxyribonuclease hydrolysis determined by high-performance liquid anion-exchange chromatography

1980

DeoxyribonucleasesChromatographyLymphomaIon exchangeChemistryOrganic ChemistryDeoxyribonucleaseDNANeoplasms ExperimentalGeneral MedicineChromatography Ion ExchangeBiochemistryCell LineAnalytical ChemistryDNA metabolismMiceHydrolysisBiochemistryAnimalsChromatography High Pressure LiquidJournal of Chromatography A
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