Search results for "PIGMENT"

showing 10 items of 626 documents

Kinetic Studies of the Assembly of Plant Light Harvesting Complex II

1998

Photosynthesis relies on the correct assembly of pigment binding proteins within the thylakoid membrane. Yet, very little is known about the folding of such membrane proteins. The biochemical difficulties connected with these highly hydrophobic proteins are reflected in the low number of crystal structures available for membrane proteins to date. One of the few available, however, is that of LCHII (1). In addition, LHCII is one of only a handful of membrane proteins that can be regenerated in vitro to a native-like conformation (2,3). These two features make it a good candidate for studying its folding and assembly kinetics. Here, a preliminary study on the assembly kinetics of LHCII as a f…

Folding (chemistry)chemistry.chemical_compoundMonomerchemistryMembrane proteinYield (chemistry)ThylakoidPigment bindingKineticsBiophysicsMicelle
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Life History Trade-Offs and Relaxed Selection Can Decrease Bacterial Virulence in Environmental Reservoirs

2012

Pathogen virulence is usually thought to evolve in reciprocal selection with the host. While this might be true for obligate pathogens, the life histories of opportunistic pathogens typically alternate between within-host and outside-host environments during the infection-transmission cycle. As a result, opportunistic pathogens are likely to experience conflicting selection pressures across different environments, and this could affect their virulence through life-history trait correlations. We studied these correlations experimentally by exposing an opportunistic bacterial pathogen Serratia marcescens to its natural protist predator Tetrahymena thermophila for 13 weeks, after which we meas…

Food ChainEvolutionary ProcessesScienceVirulenceParallel EvolutionPathogenesisEnvironmentBiologyForms of EvolutionMicrobiologyDivergent EvolutionTetrahymena thermophilaMicrobial Ecology03 medical and health sciencesNatural Selectionexperimental evolutionSelection GeneticAdaptationBiologyMicrobial PathogensPathogenSerratia marcescensSelection (genetic algorithm)030304 developmental biologyGeneticsEvolutionary Biology0303 health sciencesMultidisciplinaryEcologyObligate030306 microbiologyHost (biology)Mechanism (biology)QRAdaptation PhysiologicalBiological EvolutionBacterial PathogensvirulenceEvolutionary EcologyMicrobial EvolutionBacterial pigmentMedicineta1181AdaptationResearch ArticlePLoS ONE
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Seasonal changes in predator community switch the direction of selection for prey defences

2014

Insect communities consist of aposematic species with efficient warning colours against predation, as well as abundant examples of crypsis. To understand such coexistence, we here report results from a field experiment where relative survival of artificial larvae, varying in conspicuousness, was estimated in natural bird communities over an entire season. This takes advantage of natural variation in the proportion of naive predators: naivety peaks when young birds have just fledged. We show that the relative benefit of warning signals and crypsis changes accordingly. When naive birds are rare (early and late in the season), conspicuous warning signals improve survival, but conspicuousness b…

Food ChainNaivetymedia_common.quotation_subjectAdaptation BiologicalGeneral Physics and Astronomy1600 General ChemistryGenetics and Molecular BiologyInsectAposematismBiologyArticleStatistics NonparametricGeneral Biochemistry Genetics and Molecular BiologyPredationBirds10127 Institute of Evolutionary Biology and Environmental StudiesFood chainSpecies Specificity1300 General Biochemistry Genetics and Molecular BiologyAnimalsOrganic ChemicalsSelection GeneticPredatorFinlandmedia_commonMultidisciplinaryPigmentationEcologyFledgeGeneral Chemistry3100 General Physics and AstronomyLepidopteraLarvaGeneral BiochemistryCrypsista1181570 Life sciences; biology590 Animals (Zoology)SeasonsNature Communications
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2014

Purpose The removal of excessive melanin pigments that obscure ocular tissue morphology is important to address scientific questions and for differential diagnosis of ocular tumours based on histology. Thus, the goal of the present study was to establish an effective and fast melanin bleaching method for paraffin and frozen mouse and human ocular tissues. Methods Paraffin-embedded and frozen ocular specimens from mice and human donors were subjected to bleaching employing two methods. The first employed potassium permanganate (KMnO4) with oxalic acid, and the second 10% hydrogen peroxide (H2O2). To determine optimal bleaching conditions, depigmentation was carried out at various incubation …

Frozen section procedurePathologymedicine.medical_specialtyMultidisciplinarygenetic structuresH&E stainHistologyBiologyMelaninchemistry.chemical_compoundPotassium permanganateDepigmentationchemistrymedicinesense organsmedicine.symptomHydrogen peroxideParaformaldehydePLOS ONE
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Partial purification and initial characterization of phytochrome from the mossAtrichum undulatum P. Beauv. grown in the light.

1988

The extraction and partial purification of phytochrome from light-grownAtrichum undulatum P. Beauv., a chlorophyllous moss, is described. Polyethyleneimine and salt fractionation followed by hydroxyapatite and Affi-gel-blue chromatography were used to separate phytochrome from chlorophyll, and to purify the pigment. All steps were performed in the presence of Triton X-100 which improved the yield by a factor of about three. The protein has a molecular weight some-what larger than that ofAvena phytochrome (124 kDa), as determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunoblot analysis. It cross-reacts with a monoclonal antibody against phytochrome from etiolated …

Gel electrophoresisfood.ingredientbiologyPhytochromefood and beveragesPlant Sciencechemistry.chemical_compoundPigmentAvenafoodchemistryBiochemistryPolyclonal antibodiesChromoproteinChlorophyllvisual_artEtiolationGeneticsbiology.proteinvisual_art.visual_art_mediumPlanta
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Correction for Frantz et al., Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

2020

Significance Archaeological evidence indicates that domestic pigs arrived in Europe, alongside farmers from the Near East ∼8,500 y ago, yet mitochondrial genomes of modern European pigs are derived from European wild boars. To address this conundrum, we obtained mitochondrial and nuclear data from modern and ancient Near Eastern and European pigs. Our analyses indicate that, aside from a coat color gene, most Near Eastern ancestry in the genomes of European domestic pigs disappeared over 3,000 y as a result of interbreeding with local wild boars. This implies that pigs were not domesticated independently in Europe, yet the first 2,500 y of human-mediated selection applied by Near Eastern Ne…

Gene FlowMultidisciplinarySwineLibrary scienceSkin PigmentationBiological SciencesCorrectionsDNA MitochondrialDomesticationEuropeMiddle EastAnthropologyevolutionAnimalsNeolithicDNA AncientHistory AncientPhylogeny
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Structural stability and properties of three isoforms of the major light-harvesting chlorophyll a/b complexes of photosystem II.

2008

AbstractThree isoforms of the major light-harvesting chlorophyll (Chl) a/b complexs of photosystem II (LHCIIb) in the pea, namely, Lhcb1, Lhcb2, and Lhcb3, were obtained by overexpression of apoprotein in Escherichia coli and by successfully refolding these isoforms with thylakoid pigments in vitro. The sequences of the protein, pigment stoichiometries, spectroscopic characteristics, thermo- and photostabilities of different isoforms were analysed. Comparison of their spectroscopic properties and structural stabilities revealed that Lhcb3 differed strongly from Lhcb1 and Lhcb2 in both respects. It showed the lowest Qy transition energy, with its reddest absorption about 2 nm red-shifted, an…

Gene isoformChlorophyllChlorophyll aProtein FoldingPhotosystem IIBiophysicsLight-Harvesting Protein ComplexesPhotochemistryBiochemistryThylakoidsReconstitutionchemistry.chemical_compoundPigmentPigment stoichiometryEscherichia coliThermal stabilityMajor light-harvesting chlorophyll a/b complex of photosystem IIProtein Structure QuaternaryThermostabilityPlant ProteinsChlorophyll APeasPhotosystem II Protein ComplexCell BiologyRecombinant ProteinsIsoenzymeschemistryPhotostabilityChlorophyllThylakoidvisual_artBiophysicsvisual_art.visual_art_mediumThermostabilityBiochimica et biophysica acta
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Differential Distribution of Harmonin Isoforms and Their Possible Role in Usher-1 Protein Complexes in Mammalian Photoreceptor Cells

2003

PURPOSE. Human Usher syndrome is the most common form of combined deafness and blindness. Usher type I (USH1), the most severe form, is characterized by profound congenital deafness, constant vestibular dysfunction, and prepubertal onset retinitis pigmentosa. Previous studies have shown that the USH1-proteins myosin VIIa, harmonin, and cadherin 23 interact and form a functional network during hair cell differentiation in the inner ear. The purpose of the present study was to analyze the molecular and cellular functions of these USH1 proteins in the mammalian retina. METHODS. Antibodies to USH1 proteins were generated and used in Western blot analysis of subcellular photoreceptor fractions a…

Gene isoformUsher syndromeBlotting WesternSynaptophysinCell Cycle ProteinsMyosinsBiologyPhotoreceptor cellMiceRetinitis pigmentosaotorhinolaryngologic diseasesmedicineAnimalsProtein IsoformsRats WistarFluorescent Antibody Technique IndirectMicroscopy ImmunoelectronCytoskeletonGeneticsRetinaHair cell differentiationReverse Transcriptase Polymerase Chain ReactionCadherinDyneinsCadherinsmedicine.diseaseeye diseasesRatsCell biologyMice Inbred C57BLCytoskeletal Proteinsmedicine.anatomical_structureMicroscopy FluorescenceMyosin VIIasense organsCarrier ProteinsPhotoreceptor Cells VertebrateSubcellular FractionsInvestigative Opthalmology & Visual Science
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The Cellular Function of the Usher Gene Product Myosin VIIa is Specified by Its Ligands

2003

Defects in myosin Vlla are responsible for Usher Syndrome 1B (Weil et al., 1995). Human Usher syndrome (USH), named after the British ophthalmologist Charles Usher (Usher, 1914), is the most common hereditary form of combined blind-and deafness (~ 50% of cases in the developed countries). USH designates a group of clinically and genetically heterogeneous disorders with hearing loss and retinitis pigmentosa (RP). Three different USH types (USH1, 2 and 3; see Table 1) can be distinguished according to the degree of clinical symptomes. USH1 is the most severe subtype, characterized by severe to profound congenital sensorineuronal deafness, constant vestibular dysfunction (balance deficiency) a…

Gene productGeneticsCDH23Genetic heterogeneityUsher syndromeRetinitis pigmentosaMyosinotorhinolaryngologic diseasesmedicineProtocadherinBiologymedicine.diseasePCDH15
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An autosomal dominant retinitis pigmentosa family with close linkage to D7S480 on 7q.

1995

Retinitis pigmentosa is the most prevalent inherited disorder of the retina. It can be autosomal dominant (adRP), autosomal recessive (arRP) or X-linked (XLRP). A form of adRP mapping to chromosome 7q was reported in a large Spanish pedigree. We have typed DNA from the members of another Spanish family for polymorphic markers from the known candidate genes. Positive lod scores were obtained only for the markers located on 7q31-35, giving a maximum lod score of 2.98 (3.01 by multipoint analysis) at theta = 0.00 for D7S480. A brief clinical evaluation is given.

Genetic MarkersMaleCandidate genecongenital hereditary and neonatal diseases and abnormalitiesgenetic structuresBiologyAutosomal dominant retinitis pigmentosaGene mappingRetinitis pigmentosaGeneticsmedicineHumansGeneGenetics (clinical)Genes DominantLinkage (software)GeneticsChromosome Mappingmedicine.diseaseHuman geneticseye diseasesPedigreeGenetic markerFemaleLod ScoreChromosomes Human Pair 7Retinitis PigmentosaHuman genetics
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