Search results for "PLASMID"

showing 10 items of 327 documents

Characterization of endemic Shigella boydii strains isolated in Iran by serotyping, antimicrobial resistance, plasmid profile, ribotyping and pulsed-…

2008

Background: Shigellosis is one of the major causes of morbidity in children with diarrhea in Iran. The present study was undertaken to characterize apparently sporadic Shigella boydii strains isolated from pediatric patients in Iran. Findings: Ten S. boydii strains isolated from pediatric cases of gastroenteritis and acute diarrhea in Tehran between December 2002 and November 2003 were submitted to serotyping, antimicrobial susceptibility testing, plasmid profile analysis, ribotyping and pulsed field gel electrophoresis (PFGE). Seven isolates were attributed to serotype 2, whereas the remaining three belonged to serotypes 14, 18, 19, respectively. Six drug resistance phenotypes (R1 to R6) w…

SerotypeMedicine(all)Shigellosisbiologybusiness.industryBiochemistry Genetics and Molecular Biology(all)molecular typingShort ReportShigella sonneiGeneral MedicineDrug resistanceSettore MED/42 - Igiene Generale E Applicatamedicine.diseasebiology.organism_classificationGeneral Biochemistry Genetics and Molecular BiologyMicrobiologyRibotypingPlasmidAmpicillinmedicinePulsed-field gel electrophoresisepidemiologybusinessmedicine.drugShigella boydiiBMC Research Notes
researchProduct

Pheno-genotyping of Salmonella enterica serotype Enteritidis isolates identified in Sicily during a reemergence period.

2005

After an upward trend paralleling that occurring in most European countries, including Italy, since October 2002 Salmonella enterica serotype Enteritidis (S. Enteritidis) has again gained the first position among outbreak and sporadic human isolates of Salmonella in Sicily. Because phage typing of S. Enteritidis has many technical and epidemiological limitations and molecular methods have proved to be poorly discriminative for this organism, multiple typing, using phage typing together with pulsed field gel electrophoresis (PFGE) and plasmid profiling on a sample of fifty human and poultry isolates identified during the period October 2002 to May 2003 in Sicily, was chosen as the most valua…

SerotypeSalmonellaGenotypeSalmonella enteritidisEggsBiologymedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyDisease OutbreaksmedicinePulsed-field gel electrophoresisAnimalsHumansTypingSicilyPhylogenyPhage typingBacterial Typing Techniques Eggs microbiology Plasmids genetics Salmonella Food oisoning epidemiology Salmonella enteritidis isolation & purificationMolecular EpidemiologyMolecular epidemiologybiology.organism_classificationVirologyBacterial Typing TechniquesElectrophoresis Gel Pulsed-FieldPhenotypeSalmonella enteritidisSalmonella entericaFood MicrobiologyAnimal Science and ZoologySalmonella Food PoisoningChickensFood SciencePlasmidsFoodborne pathogens and disease
researchProduct

A Bacillus thuringiensis strain producing epizootics on Plodia interpunctella: A case study

2012

Abstract After several disease outbreaks in laboratory cultures of pyralid moths in Tabriz University, Iran, during 2004 and 2005, a new Bacillus thuringiensis aizawai strain EF495116 (BTA) was isolated from a dead Plodia interpunctella larva. A complete characterization of the strain was performed, including serological identification, protein and plasmid pattern determination, a PCR-based identification of virulence-related genes, nucleotide sequence analysis of the 16S rDNA and gyrB genes (in order to find out relationships between the species with other virulent Bacillus pathogens), and biological activity assays. These studies revealed that BTA produced a major parasporal protein band …

SerotypeSequence analysisfungiNucleic acid sequenceVirulenceBacillusHorticultureBiology16S ribosomal RNAbiology.organism_classificationMicrobiologyPlasmidInsect ScienceBacillus thuringiensisAgronomy and Crop ScienceFood ScienceJournal of Stored Products Research
researchProduct

Genomic Epidemiology of Salmonella Infantis in Ecuador: From Poultry Farms to Human Infections

2020

Salmonella enterica is one of the most important foodborne pathogens around the world. In the last years, S. enterica serovar Infantis has become an important emerging pathogen in many countries, often as multidrug resistant clones. To understand the importance of S. enterica in the broiler industry in Ecuador, we performed a study based on phenotypic and WGS data of isolates from poultry farms, chicken carcasses and humans. We showed a high prevalence of S. enterica in poultry farms (41.4%) and chicken carcasses (55.5%), but a low prevalence (1.98%) in human samples. S. Infantis was shown to be the most prevalent serovar with a 98.2, 97.8, and 50% in farms, foods, and humans, respectively,…

SerotypeVeterinary medicinemegaplasmidEpidemiologyBioinformatica & DiermodellenVirulenceBiologybroilerAntibiotic resistancePlasmidBio-informatics & Animal modelsEpidemiology Bio-informatics & Animal modelsOriginal ResearchHost Pathogen Interaction & DiagnosticsEpidemiologielcsh:Veterinary medicineGeneral VeterinaryMolecular epidemiologybusiness.industryBacteriologieSalmonella InfantisBacteriologyBacteriology Host Pathogen Interaction & DiagnosticsPoultry farmingbiology.organism_classificationHost Pathogen Interactie & DiagnostiekMultiple drug resistanceST32Salmonella entericaEpidemiologie Bioinformatica & DiermodellenBacteriologie Host Pathogen Interactie & Diagnostieklcsh:SF600-1100Veterinary ScienceEcuadorbusinessmultidrug resistance (MDR)WGSFrontiers in Veterinary Science
researchProduct

Development of S/MAR plasmid vector for persistent expression and maintenance in vivo

2007

An ideal gene therapy vector should enable persistent transgene expression without limitations of safety and reproducibility. Here we report the development of a non-viral episomal plasmid DNA (pDNA) vector that appears to fulfil these criteria. This pDNA vector combines a scaffold/matrix attachment region (S/MAR) with a human liver-specific promoter (a1-antitrypsin (AAT)) in such a way that long-term expression is enabled in murine liver following hydrodynamic injection. Long-term expression is demonstrated by monitoring the longitudinal luciferase expression profile for up to 6 months by means of in situ bioluminescent imaging. We conclude that the combination of a mammalian, tissue-speci…

Settore MED/38 - Pediatria Generale E SpecialisticaNon-viral episomal plasmid DNA (pDNA) vector S/MAR element AAT-promoter.
researchProduct

Candida albicans TDH3 gene promotes secretion of internal invertase when expressed in Saccharomyces cerevisiae as a glyceraldehyde-3-phosphate dehydr…

2003

We have checked the ability of the Candida albicans GAPDH polypeptide, which lacks a conventional N-terminal signal peptide, to reach the cell wall in Saccharomyces cerevisiae by using an intracellular form of the yeast invertase as a reporter protein. A hybrid TDH3-SUC2 gene containing the C. albicans TDH3 promoter sequences and a coding region encoding a fusion protein formed by the C. albicans GAPDH polypeptide, fused at its C-terminus with the yeast internal invertase, was constructed in a centromer derivative plasmid and transformed into a Suc(-) S. cerevisiae strain. Transformants displayed invertase activity measured in intact whole cells, and were able to grow on sucrose as the sole…

Signal peptideSaccharomyces cerevisiae ProteinsGlycoside HydrolasesSaccharomyces cerevisiaeMolecular Sequence DataBioengineeringSaccharomyces cerevisiaeBiologyApplied Microbiology and BiotechnologyBiochemistryGene productFungal ProteinsTransformation Geneticstomatognathic systemCell WallGene Expression Regulation FungalCandida albicansGeneticsAmino Acid SequenceCandida albicansDNA FungalPeptide sequenceGlyceraldehyde 3-phosphate dehydrogenaseBase Sequencebeta-FructofuranosidaseMembrane ProteinsRNA Fungalbiology.organism_classificationBlotting NorthernMolecular biologyFusion proteinRecombinant ProteinsInvertaseBiochemistrybiology.proteinGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)BiotechnologyPlasmidsYeast (Chichester, England)
researchProduct

F17-like fimbriae from an invasive Escherichia coli strain producing cytotoxic necrotizing factor type 2 toxin

1994

The F17b fimbriae encoded by the transmissible virulence plasmid Vir, also coding for cytotoxic necrotizing factor type 2, were characterized. A 5.7-kb region of Vir mediates in vitro N-acetylglucosamine-sensitive adhesion to calf intestinal villi. Sequence analysis revealed that this region codes for a structural subunit and an adhesin closely related to the F17-A and F17-G proteins encoded by the F17 fimbrial gene cluster. The F17b-A gene presents an open reading frame of 540 bp encoding a polypeptide of 180 amino acids with a putative signal peptide of 21 residues. The mature protein shows an identity of 74% with the F17-A structural subunit. This 20-kDa protein is recognized by antiseru…

Signal peptideVirulence Factors[SDV]Life Sciences [q-bio]Bacterial ToxinsMolecular Sequence DataImmunologyFimbriaMutantBiologymedicine.disease_causeMicrobiologyMicrobiologyBacterial ProteinsGene clusterEscherichia colimedicineAmino Acid SequenceEscherichia coliPeptide sequenceAdhesins Escherichia coliAntigens BacterialBase SequenceCytotoxinsEscherichia coli ProteinsSEQUENCE NULECOTIDIQUEbiochemical phenomena metabolism and nutritionMolecular biology[SDV] Life Sciences [q-bio]Bacterial adhesinOpen reading frameInfectious DiseasesFimbriae BacterialCLONAGE DE GENEParasitologyResearch ArticleBacterial Outer Membrane ProteinsPlasmidsInfection and Immunity
researchProduct

Synthesis and characterization of polyaspartamide copolymers obtained by ATRP for nucleic acid delivery

2014

Abstract Nucleic acid molecules such as small interfering RNAs (siRNAs) and plasmidic DNAs (pDNAs) have been shown to have the potential to be of therapeutic value in different human diseases. Their practical use is however compromised by the lack of appropriate release systems. Delivered as naked molecules, siRNAs/pDNAs are rapidly degraded by extracellular nucleases thus considerably reducing the amount of molecule which can reach the target cells. Additionally, the anionic charge of the phosphate groups present on the siRNAs/pDNAs backbone, disfavors the interaction with the negatively charged surface of the cell membrane. In this paper we describe the generation of a novel polymer able …

Small interfering RNACell SurvivalPharmaceutical ScienceATRPMethacrylateTransfectionsiRNA; deliveryPolymerizationchemistry.chemical_compoundMiceSiRNA delivery; DNA delivery; Polyaspartamide; ATRPCell Line TumorPolymer chemistryCopolymerAnimalsHumansRNA MessengerRNA Small Interferingchemistry.chemical_classificationAtom-transfer radical-polymerizationPolymerDNACombinatorial chemistryPolyaspartamideMonomerchemistryPolymerizationsiRNANucleic acidSiRNA deliveryMethacrylatesdeliveryPeptidesE2F1 Transcription FactorDNA deliveryPlasmids
researchProduct

Crystal structure of [Cu(N-quinolin-8-yl-p-toluenesulfonamidate)2]: study of its interaction with DNA and hydrogen peroxide

2001

A new copper complex with N-quinolin-8-yl-p-toulenesulfonamide has been prepared and characterised. The compound crystallises in the triclinic system, space group P1, with a=13.457(3), b=15.067(5), c=18.589(3) A; α=112.05(2), β=93.92(2), γ=108.30(2)° and Z=4. The geometry of the Cu(II) ion is distorted square planar. The N-quinolin-8-yl-p-toulenesulfonamidate anion behaves as a bidentate ligand through the N s u l f o n a m i d a t e and N q u i n o l i n e atoms. The complex does not cleave DNA in the presence of hydrogen peroxide.

StereochemistryCrystal structureTriclinic crystal systemCrystallography X-RayBiochemistryIonInorganic Chemistrychemistry.chemical_compoundCleaveOrganometallic CompoundsHydrogen peroxidechemistry.chemical_classificationSulfonamidesCopper complexDose-Response Relationship DrugMolecular StructureHydrolysisSpectrum AnalysisDNAHydrogen PeroxideSulfonamideCrystallographychemistryQuinolinesCopperDNADNA DamagePlasmidsJournal of Inorganic Biochemistry
researchProduct

DNA interaction of new copper(II) complexes with sulfonamides as ligands

2007

New copper(II) complexes with sulfonamide ligands have been prepared and characterized. Sulfonamide ligands were prepared through a reaction between 8-aminoquinoline and either 2-mesitylene (Hqmesa), 4-tert-butylbenzene (Hqtbsa), or alpha-toluene (Halphaqtsa) sulfonyl chlorides. The structural analysis carried out for complex [Cu(alphaqtsa)(2)] indicated that the local environment of the Cu(II) cation is between a square planar and a tetrahedral geometry, with stacking of the benzene rings of the sulfonyl ligands between neighbor molecules. Powder EPR spectra at room temperature gave rhombic spectra for the [Cu(alphaqtsa)(2)] and [Cu(qmesa)(2)] complexes and an axial spectrum for the [Cu(qt…

Steric effectsMolecular Conformationchemistry.chemical_elementAscorbic AcidCrystallography X-RayPhotochemistryBiochemistryMedicinal chemistrylaw.inventionInorganic ChemistrylawOrganometallic CompoundsMoleculeSinglet stateElectron paramagnetic resonancechemistry.chemical_classificationSulfonylSulfonamidesMolecular StructureTetrahedral molecular geometryDNACopperIntercalating AgentsSulfonamidechemistryReactive Oxygen SpeciesCopperPlasmidsJournal of Inorganic Biochemistry
researchProduct