Search results for "Pediococcus"

showing 10 items of 61 documents

Identification of Carnobacterium, Lactobacillus, Leuconostoc and Pediococcus by rDNA-based techniques

2003

Summary Ribosomal DNA-based techniques including the analysis of profiles generated by ISR amplification, ISR restriction and ARDRA have been evaluated as molecular tools for identifying Carnobacterium, Lactobacillus, Leuconostoc and Pediococcus. They have been applied for the molecular characterization of 91 strains with the following identities: eight Carnobacterium including the eight type species of the genus; 61 Lactobacillus including 40 type strains out of 45 species, 13 Leuconostoc, out of them 11 are type strains and three are subspecies of Lc. mesenteroides; and nine strains representing the six species of genus Pediococcus. The genetic relationship displayed between these species…

DNA BacterialGenotypeMolecular Sequence DataSubspeciesCarnobacteriumGram-Positive BacteriaDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyGenusRNA Ribosomal 16SLactobacillusDNA Ribosomal SpacerLeuconostocPediococcusRibosomal DNAPhylogenyEcology Evolution Behavior and SystematicsGeneticsbiologyfood and beveragesGenes rRNASequence Analysis DNAbiology.organism_classificationBacterial Typing TechniquesLactobacillusType speciesFood MicrobiologybacteriaPediococcusLeuconostocPolymorphism Restriction Fragment LengthSystematic and Applied Microbiology
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Molecular analysis of the dominant lactic acid bacteria of chickpea liquid starters and doughs and propagation of chickpea sourdoughs with selected W…

2020

Abstract Fermented chickpea liquid is used as a leavening agent in chickpea bread production. In the present study, traditional chickpea liquid starter and dough samples were collected from bakeries in Turkey and microbiologically investigated. Culture-independent analysis for microbiota diversity, performed by MiSeq Illumina, identified Clostridium perfringens as major group in all samples, while Weissella spp. Dominated LAB community. A culture-dependent methodology was applied and 141 isolates were confirmed to be members of the LAB group based on 16s rRNA gene sequence analysis. In particular, 11 different LAB species were identified confirming the high frequency of isolation of weissel…

DNA BacterialRAPD-PCRWeissellaMicrobiology03 medical and health sciencesStarterLactobacillalesRNA Ribosomal 16SCerealFood scienceVolatile organic compoundsWeissella cibaria030304 developmental biologyLeavening agent0303 health sciencesbiology030306 microbiologyLactobacillus brevisfood and beveragesPediococcus acidilacticiBreadSequence Analysis DNAbiology.organism_classificationCicerLegumeSettore AGR/15 - SCIENZE E TECNOLOGIE ALIMENTARILeuconostoc mesenteroidesWeissellaFermentationFood MicrobiologyFermented FoodsMySeq illuminaLactobacillus plantarumFood ScienceSettore AGR/16 - Microbiologia Agraria
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Use of a species-specific multiplex PCR for the identification of pediococci.

2008

In this study, the 23S rRNA genes of nine different Pediococcus type strains were sequenced. By using a multiple sequence alignment with 23S rDNA sequences of related lactic acid bacteria two primer pairs were constructed, one for the general identification of the genus Pediococcus and one for the identification of the atypical species, P. dextrinicus. Furthermore, a primer set for a rapid multiplex PCR identification of the eight typical Pediococcus species was developed. With this technique, the species P. damnosus, P. parvulus, P. inopinatus, P. cellicola, P. pentosaceus, P. acidilactici, P. claussenii, and P. stilesii could be discriminated simultaneously in a single PCR. Experiments wi…

DNA BacterialSequence analysisFood ContaminationWineMicrobiologyPolymerase Chain ReactionSensitivity and Specificitylaw.inventionMicrobiologySpecies Specificity23S ribosomal RNAlawMultiplex polymerase chain reactionPediococcusPolymerase chain reactionWinebiologyBase Sequencefood and beveragesGeneral MedicineSequence Analysis DNARibosomal RNAbiology.organism_classificationRNA Ribosomal 23SPediococcusPrimer (molecular biology)Sequence AlignmentFood ScienceInternational journal of food microbiology
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Inducible metabolism of phenolic acids in Pediococcus pentosaceus is encoded by an autoregulated operon which involves a new class of negative transc…

2000

ABSTRACTPediococcus pentosaceusdisplays a substrate-inducible phenolic acid decarboxylase (PAD) activity onp-coumaric acid. Based on DNA sequence homologies between the three PADs previously cloned, a DNA probe of theLactobacillus plantarum pdcgene was used to screen aP. pentosaceusgenomic library in order to clone the corresponding gene of this bacteria. One clone detected with this probe displayed a low PAD activity. Subcloning of this plasmid insertion allowed us to determine the part of the insert which contains a 534-bp open reading frame (ORF) coding for a 178-amino-acid protein presenting 81.5% of identity withL. plantarumPDC enzyme. This ORF was identified as thepadAgene. A second O…

DNA BacterialTranscription GeneticOperonCarboxy-LyasesMolecular Sequence DataGenetics and Molecular BiologyBiologyMicrobiologyGene Expression Regulation EnzymologicPlasmidBacterial ProteinsSequence Homology Nucleic AcidOperonEscherichia coliHydroxybenzoatesGenomic libraryAmino Acid SequencePediococcusCloning MolecularMolecular BiologyGeneRegulator geneGeneticsBase SequenceSequence Homology Amino Acidfood and beveragesPromoterGene Expression Regulation BacterialSequence Analysis DNAMolecular biologyCulture MediaRepressor ProteinsOpen reading frameLactobacillusSubcloningGenes BacterialJournal of bacteriology
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16S-ARDRA, a tool for identification of lactic acid bacteria isolated from grape must and wine.

2003

Lactic acid bacteria (LAB) are found in a great variety of habitats, including grape must and wines. There is a close relationship between the species of LAB which develop during fermentation and the eventual quality of the wine. For these reasons analytical techniques allowing fast and reliable identification of wine LAB are needed. In this work a simple and accurate protocol for identifying species of LAB isolated from grape must and wine is presented. This protocol is based on the amplification, directly from colony, of 16S rDNA and later digestion with one of the following restriction enzymes BfaI, MseI and AluI. A sequential use of the three enzymes is proposed to simplify LAB wine ide…

DNA BacterialWineGram-Positive BacteriaApplied Microbiology and BiotechnologyMicrobiologyDNA RibosomalPolymerase Chain ReactionLactobacillusLeuconostocFood microbiologyLactic AcidPediococcusEcology Evolution Behavior and SystematicsPhylogenyOenococcus oeniHexosesWinebiologyLactobacillus brevisbusiness.industrybiology.organism_classificationDNA FingerprintingBiotechnologyLactobacillusFermentationFood MicrobiologyPediococcusbusinessOenococcusLeuconostocSystematic and applied microbiology
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A real-time PCR assay for detection and quantification of 2-branched (1,3)-β-D–glucan producing lactic acid bacteria in cider

2010

28 p.-1 fig.-4 tab.

DNA Bacterialbeta-GlucansFood spoilageMicrobiologyMelting curve analysisMicrobiologyPolysaccharidesLactobacillus(13)(12)--D-glucanLactic acid bacteriaFood sciencePediococcusOenococcusOenococcus oeniDNA PrimersbiologyBacteriaSpoilageReverse Transcriptase Polymerase Chain ReactionAlcoholic BeveragesGeneral MedicineAmpliconbiology.organism_classificationBacterial Typing TechniquesLactobacillusCidersGenes BacterialGlucosyltransferasesFood MicrobiologyPediococcusProteoglycansOenococcusBacteriaFood ScienceReal-time PCR
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Which lactic acid bacteria are responsible for histamine production in wine?

2005

Aims: To quantify the ability of 136 lactic acid bacteria (LAB), isolated from wine, to produce histamine and to identify the bacteria responsible for histamine production in wine. Methods and Results: A qualitative method based on pH changes in a plate assay was used to detect wine strains capable of producing high levels of histamine. Two quantitative, highly sensitive methods were used, an enzymatic method and HPLC, to quantify the histamine produced by LAB. Finally, an improved PCR test was carried out to detect the presence of histidine decarboxylase gene in these bacteria. The species exhibiting the highest frequency of histamine production is Oenococcus oeni. However, the concentrati…

DNA Bacterialved/biology.organism_classification_rank.speciesWineLactobacillus hilgardiiHistidine DecarboxylaseGram-Positive BacteriaApplied Microbiology and BiotechnologyPolymerase Chain Reactionchemistry.chemical_compoundLactobacillusPediococcusHistamine ProductionChromatography High Pressure LiquidWinemakingOenococcus oenibiologyved/biologyfood and beveragesGeneral Medicinebiology.organism_classificationLactobacilluschemistryBiochemistryGenes BacterialFood MicrobiologyPediococcusHistamineOenococcusLeuconostocBiotechnologyHistamineJournal of applied microbiology
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Effect of lactic acid fermentation of lupine wholemeal on acrylamide content and quality characteristics of wheat-lupine bread

2013

The effect of supplementing wheat flour at a level of 15% with lupine (Lupinus angustifolius L.) wholemeal fermented by different lactic acid bacteria on acrylamide content in bread crumb as well as on bread texture and sensory characteristics was analysed. The use of fermented lupine resulted in a lower specific volume and crumb porosity of bread on an average by 14.1% and 10.5%, respectively, while untreated lupine lowered the latter parameters at a higher level (30.8% and 20.7%, respectively). The addition of lupine resulted in a higher by 43.3% acrylamide content compared to wheat bread (19.4 µg/kg dry weight (d.w.)). Results showed that acrylamide was significantly reduced using proteo…

FlourWheat flourchemistry.chemical_compoundLactobacillusHumansFood microbiologyLactic AcidPediococcusFood scienceTriticumAcrylamidebiologydigestive oral and skin physiologyfood and beveragesBreadbiology.organism_classificationLupinusLactobacillusLupinus angustifoliuschemistryAcrylamideFermentationSeedsFood MicrobiologyPediococcusFermentationDietary ProteinsLactic acid fermentationFood ScienceInternational Journal of Food Sciences and Nutrition
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Identification of subdominant sourdough lactic acid bacteria and their evolution during laboratory-scale fermentations

2007

Abstract Presumptive lactic acid bacterial cocci were found in six sourdoughs (out of 20) from the Abruzzo region (central Italy) and subjected to phenotypic and genotypic characterization. A total of 21 isolates, recognized as seven strains by randomly amplified polymorphic DNA (RAPD)–polymerase chain reaction (PCR) typing, were identified by a polyphasic approach, consisting of 16S rRNA gene sequencing, multiplex PCR assays and physiological features, as Enterococcus faecium and Pediococcus pentosaceus. Four strains belonging to those species and previously isolated from wheat kernels were inoculated in sterile flour to verify their capacity to grow in sourdough environment. Doughs with s…

GenotypeColony Count MicrobialLactobacillus sanfranciscensisMicrobiologyMicrobiologychemistry.chemical_compoundSpecies SpecificityRNA Ribosomal 16Sco-fermentazioni batteri lattici sottodominantiMultiplex polymerase chain reactionPediococcusTypingPhylogenybiologyfood and beveragesBreadHydrogen-Ion Concentrationbiology.organism_classificationRandom Amplified Polymorphic DNA TechniqueRAPDLactic acidLactobacillusRNA BacterialPhenotypechemistryFermentationFood MicrobiologyFermentationEnterococcusBacteriaFood ScienceEnterococcus faeciumFood Microbiology
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Microbial and chemical origins of the bactericidal activity of thermally treated yellow mustard powder toward Escherichia coli O157:H7 during dry sau…

2010

Abstract Work examines the origin of bactericidal activity in mustard flour and explores the relative contribution from starter cultures, E. coli O157:H7 itself and other sources. Bacteria can degrade naturally occurring glucosinolates in mustard and form isothiocyanates with antimicrobial activity. In the present work, 24 starter cultures (mostly from commercial mixtures) were screened for their capacity to decompose the glucosinolate, sinalbin. The most active pair, Pediococcus pentosaceus UM 121P and Staphylococcus carnosus UM 123M, were used together for the production of dry fermented sausage contaminated with E. coli O157:H7 (~ 6.5 log CFU/g). They were compared to industrial starters…

Glycoside HydrolasesStaphylococcusColony Count MicrobialFood ContaminationEscherichia coli O157medicine.disease_causeMicrobiologyCholineMicrobiologychemistry.chemical_compoundStarterIsothiocyanatesmedicinePediococcusFood scienceEscherichia coliStaphylococcus carnosusbiologyMyrosinasefood and beveragesGeneral MedicineAntimicrobialbiology.organism_classificationAnti-Bacterial AgentsSinalbinMeat ProductschemistryGlucosinolateFermentationFood MicrobiologyFermentationPowdersMustard PlantFood ScienceInternational Journal of Food Microbiology
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