Search results for "Phenotype"

showing 10 items of 1875 documents

CD8 T Cells Control Cytomegalovirus Latency by Epitope-Specific Sensing of Transcriptional Reactivation

2006

ABSTRACT During murine cytomegalovirus (mCMV) latency in the lungs, most of the viral genomes are transcriptionally silent at the major immediate-early locus, but rare and stochastic episodes of desilencing lead to the expression of IE1 transcripts. This low-frequency but perpetual expression is accompanied by an activation of lung-resident effector-memory CD8 T cells specific for the antigenic peptide 168-YPHFMPTNL-176, which is derivedfrom the IE1 protein. These molecular and immunological findings were combined in the “silencing/desilencing and immune sensing hypothesis” of cytomegalovirus latency and reactivation. This hypothesis proposes that IE1 gene expression proceeds to cell surfac…

Transcriptional ActivationMuromegalovirusvirusesImmunologyAntigen presentationCD8-Positive T-LymphocytesVirus ReplicationMajor histocompatibility complexModels BiologicalMicrobiologyEpitopeImmediate-Early ProteinsEpitopesImmunocompromised HostMiceAntigenVirologyMHC class IVirus latencymedicineAnimalsGene silencingCytotoxic T cellAmino Acid SequenceAntigens ViralLungBone Marrow TransplantationMice Inbred BALB CBase Sequencebiologyvirus diseasesHerpesviridae Infectionsbiochemical phenomena metabolism and nutritionmedicine.diseaseVirologyMolecular biologyVirus LatencyVirus-Cell InteractionsPhenotypeAmino Acid SubstitutionInsect ScienceDNA ViralMutagenesis Site-DirectedTrans-Activatorsbiology.proteinFemaleJournal of Virology
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Aberrant gene expression profiles in Mediterranean sea urchin reproductive tissues after metal exposures

2019

Abstract Marine organisms are simultaneously exposed to numerous pollutants, among which metals probably represent the most abundant in marine environments. In order to evaluate the effects of metal exposure at molecular level in reproductive tissues, we profiled the sea urchin transcriptional response after non-lethal exposures using pathway-focused mRNA expression analyses. Herein, we show that exposures to relatively high concentrations of both essential and toxic metals hugely affected the gonadic expression of several genes involved in stress-response, detoxification, transcriptional and post-transcriptional regulation, without significant changes in gonadosomatic indices. Even though …

Transcriptional profilingHealth Toxicology and Mutagenesis0208 environmental biotechnologySettore BIO/05 - Zoologia02 engineering and technology010501 environmental sciencesCo-exposures01 natural sciencesGene expressionSea urchinbiologyEchinodermMetalReproductionChemistry (all)General MedicineGonadPhenotypePollutionMetalsDefence mechanismParacentrotusEchinodermsSettore BIO/07 - EcologiaEnvironmental EngineeringOffspringSea UrchinZoologySettore BIO/11 - Biologia MolecolareDefence mechanismsbiology.animalDetoxificationMediterranean SeaAnimalsEnvironmental ChemistryEpigeneticsCo-exposureGonadsGeneGametogenesis0105 earth and related environmental sciencesAnimalStress responsePublic Health Environmental and Occupational HealthGeneral Chemistry020801 environmental engineeringSea UrchinsParacentrotuEnvironmental PollutionTranscriptome
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Sex-specific responses to cold in a very cold-tolerant, northern Drosophila species

2020

AbstractOrganisms can plastically alter resource allocation in response to changing environmental factors. For example, in harsh conditions organisms are expected to shift investment from reproduction towards survival, however, the factors and mechanisms that govern the magnitude of such shifts are relatively poorly studied. Here we compared the impact of cold on males and females of the highly cold-tolerant species Drosophila montana at the phenotypic and transcriptomic levels. Although both sexes showed similar changes in cold tolerance and gene expression in response to cold treatment, indicating that the majority of changes are concordant between the sexes, we identified a clear reducti…

TranscriptomeSexual dimorphismbiologyImmunitymedia_common.quotation_subjectGene expressionZoologyReproductionbiology.organism_classificationSex specificDrosophilaPhenotypemedia_common
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Generation of GAL4-responsive muscleblind constructs

2002

The muscleblind (mbl) gene encodes protein isoforms Mbl A to Mbl D, which arise by alternative splicing from a common primary transcript. Mbl A, B, and C contain two Zn-finger domains of the type Cys3His, while Mbl D contains only one complete Zn finger. Loss of function mutations in the gene reveal that mbl is involved in both terminal photoreceptor and muscle differentiation in Drosophila. During retina development mbl is essential for rhabdomere differentiation in photoreceptor neuron. Clones homozygous null for mbl completely lack these lightharvesting structures (Begemann et al., 1997). Similarly, the terminal differentiation of the larval body wall muscles is compromised in mbl mutant…

TransgeneAlternative splicingchemical and pharmacologic phenomenaCell BiologyBiologybacterial infections and mycosesPhenotypeRhabdomereCell biologyImaginal discExonEndocrinologyRNA splicingGeneticsGenegenesis
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Regulatory T Cells More Effectively Suppress Th1-Induced Airway Inflammation Compared with Th2

2011

Abstract Asthma is a syndrome with different inflammatory phenotypes. Animal models have shown that, after sensitization and allergen challenge, Th2 and Th1 cells contribute to the development of allergic airway disease. We have previously demonstrated that naturally occurring regulatory T cells (nTregs) can only marginally suppress Th2-induced airway inflammation and airway hyperresponsiveness. In this study, we investigated nTreg-mediated suppression of Th2-induced and Th1-induced acute allergic airway disease. We demonstrate in vivo that nTregs exert their suppressive potency via cAMP transfer on Th2- and Th1-induced airway disease. A comparison of both phenotypes revealed that, despite …

TransgeneImmunologyMice TransgenicInflammationT-Lymphocytes RegulatoryMiceTh2 CellsIn vivoImmunitymedicineAnimalsImmunology and AllergyPotencyCells CulturedSensitizationAsthmaInflammationMice KnockoutMice Inbred BALB Cbusiness.industryTh1 Cellsrespiratory systemmedicine.diseasePhenotypeCoculture TechniquesImmunity Innaterespiratory tract diseasesDisease Models Animalmedicine.anatomical_structureAcute DiseaseImmunologyFemaleDisease SusceptibilityBronchial Hyperreactivitymedicine.symptombusinessThe Journal of Immunology
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Overexpression of Human and Fly Frataxins in Drosophila Provokes Deleterious Effects at Biochemical, Physiological and Developmental Levels

2011

10 pages, 5 figures. 21779322[PubMed] PMCID: PMC3136927

Transgeneved/biology.organism_classification_rank.speciesBlotting WesternLongevitylcsh:MedicineMitochondrionMotor ActivityAconitaseAnimals Genetically ModifiedModel OrganismsIron-Binding ProteinsMorphogenesisGeneticsAnimalsHumansModel organismlcsh:ScienceBiologyGeneticsAconitate HydrataseGene knockdownBrain DiseasesMultidisciplinaryMovement Disordersbiologyved/biologyDrosophila Melanogasterfungilcsh:RAnimal Modelsbiology.organism_classificationPhenotypeImmunohistochemistryMitochondriaOxidative StressNeurologyFriedreich AtaxiaGenetics of DiseaseFrataxinbiology.proteinChromatography GelMedicinelcsh:QDrosophilaDrosophila melanogasterResearch ArticleDevelopmental BiologyPLoS ONE
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Placental alkaline phosphatase types in Germany

1974

The phenotypes of placental alkaline phosphatase were determined in a sample of 231 Germans and 109 non-Germans. The observed gene frequencies of the German sample were \({\text{Pl}}^{{\text{S}}_{\text{1}} } {\text{ = 0}}{\text{.654}}\), \({\text{Pl}}^{{\text{F}}_{\text{1}} } {\text{ = 0}}{\text{.247}}\), and \({\text{Pl}}^{{\text{I}}_{\text{1}} } {\text{ = 0}}{\text{.097}}\). No association could be found with placental weight. Lower birth weight was correlated with an increase of the \({\text{Pl}}^{{\text{I}}_{\text{1}} } \) gene frequency.

Transients and MigrantsPlacentaGermany WestOrgan SizeBiologyAlkaline PhosphataseCrystallographyPhenotypeGene FrequencyPregnancyGeneticsBirth WeightHumansFemaleGenetics (clinical)Human Genetics
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Murine liver organoids as a genetically flexible system to study liver cancer in vivo and in vitro.

2019

The rising incidence of cholangiocarcinoma (CCA) coupled with a low 5-year survival rate that remains below 10% delineates the urgent need for more effective treatment strategies. Although several recent studies provided detailed information on the genetic landscape of this fatal malignancy, versatile model systems to functionally dissect the immediate clinical relevance of the identified genetic alterations are still missing. To enhance our understanding of CCA pathophysiology and facilitate rapid functional annotation of putative CCA driver and tumor maintenance genes, we developed a tractable murine CCA model by combining the cyclization recombination (Cre)-lox system, RNA interference, …

TransplantationHepatologyCas9RNA interferencemedicineOrganoidCancer researchCRISPRContext (language use)BiologyLiver cancermedicine.diseasePhenotype
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The Norway spruce genome sequence and conifer genome evolution

2013

Conifers have dominated forests for more than 200 million years and are of huge ecological and economic importance. Here we present the draft assembly of the 20-gigabase genome of Norway spruce (Picea abies), the first available for any gymnosperm. The number of well-supported genes (28,354) is similar to the >100 times smaller genome of Arabidopsis thaliana, and there is no evidence of a recent whole-genome duplication in the gymnosperm lineage. Instead, the large genome size seems to result from the slow and steady accumulation of a diverse set of long-terminal repeat transposable elements, possibly owing to the lack of an efficient elimination mechanism. Comparative sequencing of Pinu…

Transposable elementGenome evolutionRNA UntranslatedTranscription GeneticRECOMBINATIONGenomicsGENE FAMILYGenes PlantSEED PLANTSGenomeLONG NONCODING RNASSIZE VARIATIONEvolution MolecularGymnospermBotanyNaturvetenskapGene SilencingRICEPiceaGenome sizePINUSConserved SequenceWhole genome sequencingInternetMultidisciplinarybiologyTerminal Repeat SequencesBiology and Life SciencesPicea abiesGenomicsSequence Analysis DNALINEAGEbiology.organism_classificationIntronsPhenotypeDNA Transposable ElementsTRANSPOSABLE ELEMENTSORYZA-SATIVANatural SciencesGenome Plant
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Th0 to Th1 switch of CD4 T cell clones specific from the 16-kDa antigen of Mycobacterium tuberculosis after successful therapy: lack of involvement o…

2005

Abstract In this study, we have examined the influence of HLA-DR molecules and the structure of the epitope repertoire of the 16-kDa protein of Mycobacterium tuberculosis on the acquisition of the cytokine secretion pattern of CD4 T cell clones, obtained from tuberculous patients before and after anti-mycobacterial therapy. Our data indicate that TB patients have a predominant Th0 response against the 16-kDa protein and its epitopes and that healing, induced by anti-mycobacterial therapy, is associated with a shift toward a predominant Th1 phenotype. Moreover, both HLA-DR molecules restricting the clone specificity and the nature of the recognized epitope do not play any role in the generat…

TuberculosisImmunologyMolecular Sequence DataEpitopes T-LymphocyteBiologyEpitopeCell LineMycobacterium tuberculosisAntigenHLA-DRmedicineImmunology and AllergyHumansTuberculosisAmino Acid SequenceAntigens BacterialCell DifferentiationHLA-DR AntigensMycobacterium tuberculosisTh1 Cellsbiology.organism_classificationmedicine.diseaseVirologyPhenotypeClone CellsPhenotypeImmunologyCytokine secretionClone (B-cell biology)Immunology letters
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