Search results for "Phosphor"

showing 10 items of 1952 documents

Phosphoglycerate dehydrogenase genes differentially affect Arabidopsis metabolism and development.

2021

[EN] Unlike animals, plants possess diverse L-serine (Ser) biosynthetic pathways. One of them, the Phosphorylated Pathway of Serine Biosynthesis (PPSB) has been recently described as essential for embryo, pollen and root development, and required for ammonium and sulfur assimilation. The first and rate limiting step of PPSB is the reaction catalyzed by the enzyme phosphoglycerate dehydrogenase (PGDH). In Arabidopsis, the PGDH family consists of three genes, PGDH1, PGDH2 and PGDH3. PGDH1 is characterized as being the essential gene of the family. However, the biological significance of PGDH2 and PGDH3 remains unknown. In this manuscript, we have functionally characterized PGDH2 and PGDH3. Ph…

0106 biological sciences0301 basic medicineMutantArabidopsisPlant ScienceGenes Plant01 natural sciencesGene Expression Regulation EnzymologicSerine03 medical and health scienceschemistry.chemical_compoundSulfur assimilationBiosynthesisGene Expression Regulation PlantArabidopsisGeneticsSerinePhosphoglycerate dehydrogenaseGenePhosphoglycerate DehydrogenasePSPbiologyGeneral MedicinePhosphorylated pathway of serine biosynthesisbiology.organism_classificationBiosynthetic Pathways030104 developmental biologyPGDHBiochemistrychemistryEssential geneFISIOLOGIA VEGETALPhosphoserine phosphataseAgronomy and Crop Science010606 plant biology & botanyPlant science : an international journal of experimental plant biology
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The specific role of plastidial glycolysis in photosynthetic and heterotrophic cells under scrutiny through the study of glyceraldehyde-3-phosphate d…

2016

The cellular compartmentalization of metabolic processes is an important feature in plants where the same pathways could be simultaneously active in different compartments. Plant glycolysis occurs in the cytosol and plastids of green and non-green cells in which the requirements of energy and precursors may be completely different. Because of this, the relevance of plastidial glycolysis could be very different depending on the cell type. In the associated study, we investigated the function of plastidial glycolysis in photosynthetic and heterotrophic cells by specifically driving the expression of plastidial glyceraldehyde-3-phosphate dehydrogenase (GAPCp) in a glyceraldehyde-3-phosphate de…

0106 biological sciences0301 basic medicineNitrogenArabidopsisDehydrogenasePlant Science01 natural sciencesPlant RootsSerine03 medical and health scienceschemistry.chemical_compoundBiosynthesisSerineGlycolysisPlastidsPlastidPhosphorylationPhotosynthesisGlyceraldehyde 3-phosphate dehydrogenasebiologyGlyceraldehyde-3-Phosphate DehydrogenasesCompartmentalization (fire protection)CarbonArticle AddendumCytosol030104 developmental biologychemistryBiochemistryMutationbiology.proteinGlycolysis010606 plant biology & botany
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The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism

2021

Abstract Because it is the precursor for various essential cellular components, the amino acid serine is indispensable for every living organism. In plants, serine is synthesized by two major pathways: photorespiration and the phosphorylated pathway of serine biosynthesis (PPSB). However, the importance of these pathways in providing serine for plant development is not fully understood. In this study, we examine the relative contributions of photorespiration and PPSB to providing serine for growth and metabolism in the C3 model plant Arabidopsis thaliana. Our analyses of cell proliferation and elongation reveal that PPSB-derived serine is indispensable for plant growth and its loss cannot b…

0106 biological sciences0301 basic medicineNitrogenPhysiologyNitrogen assimilationCell RespirationArabidopsisPlant DevelopmentPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsBiosynthesisGlutamine synthetaseSerineGeneticsPhosphorylationResearch ArticlesCell Proliferationchemistry.chemical_classificationbiologyChemistryMetabolismBiosynthetic PathwaysAmino acid030104 developmental biologyBiochemistrybiology.proteinPhotorespirationGlutamine oxoglutarate aminotransferase010606 plant biology & botanyPlant Physiology
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Females pay the oxidative cost of dominance in a highly social bird.

2018

12 pages; International audience; Understanding the evolution and maintenance of social behaviour requires a better understanding of the physiological mechanisms underlying the trade-offs between the benefits and costs of social status. Social dominance is expected to provide advantages in terms of access to resources and to reproduction but acquiring and maintaining dominance may also entail physiological costs. Dominant individuals are likely to engage more frequently in aggressive behaviours and/or may allocate a substantial amount of energy and resources to signal their status. Hence, dominance is likely to involve multiple physiological processes that stimulate aerobic metabolism and l…

0106 biological sciences0301 basic medicineOXYsocial dominanceOxidative phosphorylationSocial behaviourBiologyphysiological costsTrade-offmedicine.disease_cause010603 evolutionary biology01 natural sciences03 medical and health sciencesFemale healthmedicineoxidative stressEcology Evolution Behavior and Systematicstrade-offPhiletairus socius030104 developmental biologyDominance (ethology)AgeingROMsAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and EcologyOxidative stressDemographySocial status[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Multifactorial and Species-Specific Feedback Regulation of the RNA Surveillance Pathway Nonsense-Mediated Decay in Plants

2018

Abstract Nonsense-mediated decay (NMD) is an RNA surveillance mechanism that detects aberrant transcript features and triggers degradation of erroneous as well as physiological RNAs. Originally considered to be constitutive, NMD is now recognized to be tightly controlled in response to inherent signals and diverse stresses. To gain a better understanding of NMD regulation and its functional implications, we systematically examined feedback control of the central NMD components in two dicot and one monocot species. On the basis of the analysis of transcript features, turnover rates and steady-state levels, up-frameshift (UPF) 1, UPF3 and suppressor of morphological defects on genitalia (SMG)…

0106 biological sciences0301 basic medicinePhysiologyRNA StabilityNonsense-mediated decayArabidopsisPlant ScienceBiology01 natural scienceslaw.inventionDephosphorylation03 medical and health sciencesSpecies SpecificityGene Expression Regulation PlantlawArabidopsis thalianaFeedback PhysiologicalRegulation of gene expressionArabidopsis ProteinsMechanism (biology)RNACell BiologyGeneral MedicineRNA surveillancebiology.organism_classificationNonsense Mediated mRNA DecayCell biology030104 developmental biologyRNA PlantSuppressorCarrier ProteinsRNA Helicases010606 plant biology & botanyPlant and Cell Physiology
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Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth

2017

[EN] In plants, phosphoglycerate kinase (PGK) converts 1,3-bisphosphoglycerate into 3-phosphoglycerate in glycolysis but also participates in the reverse reaction in gluconeogenesis and the Calvin-Benson cycle. In the databases, we found three genes that encode putative PGKs. Arabidopsis (Arabidopsis thaliana) PGK1 was localized exclusively in the chloroplasts of photosynthetic tissues, while PGK2 was expressed in the chloroplast/plastid of photosynthetic and nonphotosynthetic cells. PGK3 was expressed ubiquitously in the cytosol of all studied cell types. Measurements of carbohydrate content and photosynthetic activities in PGK mutants and silenced lines corroborated that PGK1 was the phot…

0106 biological sciences0301 basic medicinePhysiologyResearch Articles - Focus IssueMutantArabidopsisPlant ScienceGlyceric AcidsPlant Roots01 natural sciencesChloroplastGene03 medical and health sciencesCytosolGene Expression Regulation PlantArabidopsisGeneticsBIOQUIMICA Y BIOLOGIA MOLECULARMetabolomicsArabidopsis thalianaBamboo-Mosaic-VirusPlastidPhosphoglycerate kinaseGas-ChromatographybiologyArabidopsis ProteinsWild typefood and beveragesMetabolismArabidopsis-ThalianaPlant Components AerialPlants Genetically Modifiedbiology.organism_classificationHelianthus-Annuus L.3-Phosphoglycerate kinaseChloroplastPhosphoglycerate Kinase030104 developmental biologyBiochemistryMultigene FamilyMutationNicotiana-BenthamianaFISIOLOGIA VEGETALPlastics010606 plant biology & botanyPhosphorylating glyceraldehyde-3-phosphate dehydrogenaseGastric-Cancer
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Transcriptome analysis of the Populus trichocarpa–Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under N…

2017

Nutrient transfer is a key feature of the arbuscular mycorrhizal (AM) symbiosis. Valuable mineral nutrients are transferred from the AM fungus to the plant, increasing its fitness and productivity, and, in exchange, the AM fungus receives carbohydrates as an energy source from the plant. Here, we analyzed the transcriptome of the Populus trichocarpa-Rhizophagus irregularis symbiosis using RNA-sequencing of non-mycorrhizal or mycorrhizal fine roots, with a focus on the effect of nitrogen (N) starvation. In R. irregularis, we identified 1,015 differentially expressed genes, whereby N starvation led to a general induction of gene expression. Genes of the functional classes of cell growth, memb…

0106 biological sciences0301 basic medicineRhizophagus irregularisMICROBE INTERACTIONSPhysiologyarbuscule[SDV]Life Sciences [q-bio]racine finePlant Science01 natural sciencesnitrogenTranscriptomeGene Expression Regulation PlantMycorrhizaeLOTUS-JAPONICUSGLOMUS-INTRARADICESPlant ProteinsGENE-EXPRESSION2. Zero hungerazotePHOSPHATE TRANSPORTERAMMONIUM TRANSPORTERSorgan transplantationGeneral Medicinefood shortageMedicago truncatulaArbuscular mycorrhizasymbiose mycorhiziennePopulusfamineEnergy sourceARBUSCULAR MYCORRHIZABiologySULFUR STARVATION03 medical and health sciencesPHOSPHORUS ACQUISITIONSymbiosistransport de nutrimentsBotanySymbiosisGene Expression Profilingblack cottonwoodCell Biologybiology.organism_classificationMEDICAGO-TRUNCATULATransplantationpopulus trichocarpa030104 developmental biologyMembrane biogenesis010606 plant biology & botanytransplantation
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Studying the Function of the Phosphorylated Pathway of Serine Biosynthesis in Arabidopsis thaliana

2017

Photorespiration is an essential pathway in photosynthetic organisms and is particularly important to detoxify and recycle 2-phosphoglycolate (2-PG), a by-product of oxygenic photosynthesis. The enzymes that catalyze the reactions in the photorespiratory core cycle and closely associated pathways have been identified; however, open questions remain concerning the metabolic network in which photorespiration is embedded. The amino acid serine represents one of the major intermediates in the photorespiratory pathway and photorespiration is thought to be the major source of serine in plants. The restriction of photorespiration to autotrophic cells raises questions concerning the source of serin…

0106 biological sciences0301 basic medicinechemistry.chemical_classificationbiologyChemistryMetabolismbiology.organism_classificationPhotosynthesis01 natural sciencesAmino acidSerine03 medical and health scienceschemistry.chemical_compound030104 developmental biologyBiochemistryBiosynthesisBotanyPhotorespirationArabidopsis thalianaPhosphorylation010606 plant biology & botany
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The Glycerate and Phosphorylated Pathways of Serine Synthesis in Plants : The Branches of Plant Glycolysis Linking Carbon and Nitrogen Metabolism

2018

Serine metabolism in plants has been studied mostly in relation to photorespiration where serine is formed from two molecules of glycine. However, two other pathways of serine formation operate in plants and represent the branches of glycolysis diverging at the level of 3-phosphoglyceric acid. One branch (the glycerate – serine pathway) is initiated in the cytosol and involves glycerate formation from 3-phosphoglycerate, while the other (the phosphorylated serine pathway) operates in plastids and forms phosphohydroxypyruvate as an intermediate. Serine formed in these pathways becomes a precursor of glycine, formate and glycolate accumulating in stress conditions. The pathways can be linked …

0106 biological sciences0301 basic medicineycolysisReviewPlant Sciencelcsh:Plant culture01 natural sciencesSerine03 medical and health scienceslcsh:SB1-1110GlycolysisPlastidplastidNitrogen cycleglycerate serine pathwayγ-aminobutyric acid (GABA)gamma-aminobutyric acid (GABA)ChemistryBotanyCorrectionMetabolismBotanikglycolysisphosphorylated serine pathway030104 developmental biologyBiochemistryGlycinePhotorespirationPhosphorylation010606 plant biology & botany
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Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation.

2018

Although the plant Phosphorylated Pathway of l-Ser Biosynthesis (PPSB) is essential for embryo and pollen development, and for root growth, its metabolic implications have not been fully investigated. A transcriptomics analysis of Arabidopsis (Arabidopsis thaliana) PPSB-deficient mutants at night, when PPSB activity is thought to be more important, suggested interaction with the sulfate assimilation process. Because sulfate assimilation occurs mainly in the light, we also investigated it in PPSB-deficient lines in the day. Key genes in the sulfate starvation response, such as the adenosine 5′phosphosulfate reductase genes, along with sulfate transporters, especially those involved in sulfat…

0106 biological sciences570PhysiologyArabidopsisPlant Science01 natural sciencesSerinechemistry.chemical_compoundSulfur assimilationBiosynthesisArabidopsisGeneticsSerineSulfate assimilationPhosphorylationbiologyWild typeAssimilation (biology)GlutathioneArticlesbiology.organism_classificationchemistryBiochemistryTranscriptomeOxidation-ReductionSulfur010606 plant biology & botanySignal TransductionPlant physiology
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