Search results for "Platyhelminth"

showing 10 items of 28 documents

Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
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EST based phylogenomics of Syndermata questions monophyly of Eurotatoria

2008

Abstract Background The metazoan taxon Syndermata comprising Rotifera (in the classical sense of Monogononta+Bdelloidea+Seisonidea) and Acanthocephala has raised several hypotheses connected to the phylogeny of these animal groups and the included subtaxa. While the monophyletic origin of Syndermata and Acanthocephala is well established based on morphological and molecular data, the phylogenetic position of Syndermata within Spiralia, the monophyletic origin of Monogononta, Bdelloidea, and Seisonidea and the acanthocephalan sister group are still a matter of debate. The comparison of the alternative hypotheses suggests that testing the phylogenetic validity of Eurotatoria (Monogononta+Bdel…

0106 biological sciencesCharacter evolutionEvolutionRotiferaZoologyBiology010603 evolutionary biology01 natural sciencesAcanthocephalaEvolution Molecular03 medical and health sciencesMonophylyPhylogeneticsHelminthsQH359-425RNA Ribosomal 18SAnimalsBdelloideaPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyExpressed Sequence Tags0303 health sciencesPhylogenetic treeSyndermata; phylogenetic positionGenomicsSequence Analysis DNADNA Helminthbiology.organism_classificationGenetics PopulationSister groupPlatyhelminthsEvolutionary biologyMolecular phylogeneticsAcanthocephalaResearch ArticleBMC Evolutionary Biology
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Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis,…

2019

[Background] Monogenean flatworms are the main fish ectoparasites inflicting serious economic losses in aquaculture. The polyopisthocotylean Sparicotyle chrysophrii parasitizes the gills of gilthead sea bream (GSB, Sparus aurata) causing anaemia, lamellae fusion and sloughing of epithelial cells, with the consequent hypoxia, emaciation, lethargy and mortality. Currently no preventive or curative measures against this disease exist and therefore information on the host-parasite interaction is crucial to find mitigation solutions for sparicotylosis. The knowledge about gene regulation in monogenean-host models mostly comes from freshwater monopysthocotyleans and almost nothing is known about …

0106 biological sciencesGillGillsApoptosis01 natural sciencesTranscriptomeSparus aurataGene expression0303 health sciencesHigh-Throughput Nucleotide Sequencingmedicine.anatomical_structureLiverHelminthiasis AnimalMonogeneaBiotechnologyResearch ArticleFish Proteinsanimal structureslcsh:QH426-470lcsh:BiotechnologyFisheriesSpleenBiologyMicrobiologyHost-Parasite Interactions03 medical and health sciencesImmune systemIllumina RNA-seqImmunitylcsh:TP248.13-248.65GeneticsmedicineAutophagyAnimals14. Life underwaterPlatelet activationImmune responseTranscriptomics030304 developmental biologyCell ProliferationSequence Analysis RNASparus aurata Sparicotyle chrysophrii Gills Monogenea Ectoparasites Illumina RNA-seq Transcriptomics Apoptosis Immune responseGene Expression ProfilingAquatic animalSea Breamlcsh:GeneticsGene Expression RegulationPlatyhelminthsSparicotyle chrysophriiEctoparasitesSpleen010606 plant biology & botany
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A new flatworm species of Temnocephala (Rhabdocoela, Temnocephalidae) ectosymbiont on the freshwater crab Valdivia serrata (Decapoda, Trichodactylida…

2020

A new species of temnocephalan is described from the branchial chambers ofValdivia serratain Colombia asTemnocephala ivandarioisp. nov.The most distinctive characters of the new species are in the cirrus and the epidermal ‘excretory’ syncytial plates. In the present study, the terminology to describe the cirrus of species ofTemnocephalais updated. Comparison between the shape of the cirrus of the temnocephalans associated with trichodactylid crabs is also provided.

0106 biological sciencesNot assignedTrichodactyloidearoyalty.order_of_chivalryroyaltyEubrachyuraTemnocephala01 natural sciencesEriphioideaEumalacostracataxonomyDecapodaCrustacealcsh:ZoologyBilaterialcsh:QL1-991TemnocephaloideaMalacostracaReserva Natural TanimbocabiologyDecapodaCephalornisRhabdocoelaTemnocephala ivandarioi sp. nov.Taxonomy (biology)CirrusEucaridaTemnocephalidaFreshwater crabCoelenterataResearch ArticlePortunoideaValdiviaArthropodaNephrozoa010607 zoologyProtostomiaZoologyDalytyphloplanidaTrichodactylidaeTemnocephalidaeCircumscriptional names of the taxon under010603 evolutionary biologyPolychelidaSystematicsHaplopharynx quadristimulusValdivia serrataAnimaliaEcology Evolution Behavior and SystematicsTrichodactylidaeFlatwormbiology.organism_classificationCrustaceanCyclodorippoideaRhabdocoelaNotchiaEcdysozoaAnimal Science and ZoologyPlatyhelminthesCrustacea Reserva Natural Tanimboca taxonomy Temnocephala ivandarioi sp. nov.AmericasZooKeys
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A clustering package for nucleotide sequences using Laplacian Eigenmaps and Gaussian Mixture Model.

2018

International audience; In this article, a new Python package for nucleotide sequences clustering is proposed. This package, freely available on-line, implements a Laplacian eigenmap embedding and a Gaussian Mixture Model for DNA clustering. It takes nucleotide sequences as input, and produces the optimal number of clusters along with a relevant visualization. Despite the fact that we did not optimise the computational speed, our method still performs reasonably well in practice. Our focus was mainly on data analytics and accuracy and as a result, our approach outperforms the state of the art, even in the case of divergent sequences. Furthermore, an a priori knowledge on the number of clust…

0301 basic medicineNematoda01 natural sciencesGaussian Mixture Model[STAT.ML]Statistics [stat]/Machine Learning [stat.ML][MATH.MATH-ST]Mathematics [math]/Statistics [math.ST]ComputingMilieux_MISCELLANEOUScomputer.programming_language[STAT.AP]Statistics [stat]/Applications [stat.AP]Phylogenetic treeDNA ClusteringGenomicsHelminth ProteinsComputer Science Applications[STAT]Statistics [stat]010201 computation theory & mathematics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]Data analysisEmbeddingA priori and a posteriori[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Health Informatics0102 computer and information sciences[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous Computing03 medical and health sciences[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]Laplacian EigenmapsAnimalsCluster analysis[SDV.GEN]Life Sciences [q-bio]/GeneticsModels Geneticbusiness.industryPattern recognitionNADH DehydrogenaseSequence Analysis DNAPython (programming language)Mixture model[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationVisualization030104 developmental biologyComputingMethodologies_PATTERNRECOGNITIONPlatyhelminths[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Programming LanguagesArtificial intelligence[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businesscomputerComputers in biology and medicine
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Cestode parasites release extracellular vesicles with microRNAs and immunodiagnostic protein cargo.

2017

Intercellular communication is crucial in multiple aspects of cell biology. This interaction can be mediated by several mechanisms including extracellular vesicle (EV) transfer. EV secretion by parasites has been reported in protozoans, trematodes and nematodes. Here we report that this mechanism is present in three different species of cestodes, Taenia crassiceps, Mesocestoides corti and Echinococcus multilocularis. To confirm this we determined, in vitro, the presence of EVs in culture supernatants by transmission electron microscopy. Interestingly, while T. crassiceps and M. corti metacestodes secrete membranous structures into the culture media, similar vesicles were observed in the int…

0301 basic medicineOtras Ciencias Biológicas030231 tropical medicineMesocestoides cortiPlatyhelminthCiencias Biológicas03 medical and health sciencesExtracellular Vesicles0302 clinical medicineTandem Mass SpectrometryAnimalsSecretionSecretionTaenia crassicepsbiologymicroRNATaeniaVesicleRNAExtracellular vesicleHelminth Proteinsbiology.organism_classificationIn vitroCell biologyEchinococcusMicroRNAs030104 developmental biologyInfectious DiseasesImmunologyTaeniaCestodaParasitologyExtracellular vesicleCestodeCIENCIAS NATURALES Y EXACTASIntracellularChromatography LiquidInternational journal for parasitology
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Come rain or come shine: environmental effects on the infective stages of Sparicotyle chrysophrii, a key pathogen in Mediterranean aquaculture

2018

Background Evidence concerning the environmental influence on monogenean transmission and infection processes is widely accepted, although only the effects of a limited number of abiotic factors on particular monogenean species have been explored. The current context of climate change calls for further research both on this subject, and also that concerning monogenean hosts, especially in aquaculture. Methods In this study, four experiments were used to assess the response of the infective stages of Sparicotyle chrysophrii, a pathogenic monogenean from gilthead sea bream (Sparus aurata) cultures in the Mediterranean, to variations of temperature (from 10 °C to 30 °C), pH (7.0 and 7.9), phot…

0301 basic medicineSalinityClimateClimate ChangePhotoperiodZoologyContext (language use)AquacultureBiologylcsh:Infectious and parasitic diseasesFish Diseases03 medical and health sciencesAquacultureSparus aurataAnimalslcsh:RC109-216Abiotic factorsphotoperiodismAbiotic componentLarvapHHatchingbusiness.industryResearchTemperatureAquatic animalSea BreamCircadian RhythmSalinity030104 developmental biologyInfectious DiseasesFree-living stagesParasitologyTrematodaPlatyhelminthesbusinessMonogeneaParasites & Vectors
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Infracommunity level aggregation in the monogenean communities of crucian carp (Carassius carassius).

2005

Aggregation is one of the distinctive features in parasite-host relationships, which has generally been studied at the level of host communities. Parasite aggregation at the infracommunity level may nevertheless be important for intraspecific interactions such as parasite mating success and opportunities for cross-fertilization. In the present paper, we studied the infracommunity aggregation of 3 highly abundantDactylogyrus(Monogenea) species occurring on the gills of crucian carp (Carassius carassius). In line with the previous work on monogenean communities, we observed no competition between the species. At the species level, parasites were distributed unevenly on the gills showing aggre…

DactylogyrusGillsCarpsbiologyEcologymedia_common.quotation_subjectCarassius carassiusInterspecific competitionbiology.organism_classificationIntraspecific competitionCompetition (biology)Host-Parasite InteractionsInfectious DiseasesPlatyhelminthsCrucian carpParasite hostingAnimalsAnimal Science and ZoologyParasitologyMatingmedia_commonParasitology
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Interspecific and intraspecific interactions in the monogenean communities of fish: a question of study scale?

2007

SUMMARYMonogenean communities of fish have generally been considered non-interactive as negative interspecific interactions have rarely been reported. Most of the earlier studies on monogenean communities, however, have been conducted not only in systems with relatively low parasite abundances but, more importantly, at study scales where microhabitat-level interactions between the parasites are easily overlooked. We examined the communities of 3 abundant Dactylogyrus (Monogenea) species on the gills of crucian carp (Carassius carassius) by analysing the interactions at the scale of individual gill filaments, where interactions between the species, if any, should most likely take place. Cont…

Ecological nicheDactylogyrusGillsbiologyEcologyCarassius carassiusmedia_common.quotation_subjectNicheCyprinidaeInterspecific competitionBiodiversitybiology.organism_classificationCompetition (biology)Intraspecific competitionHost-Parasite InteractionsInfectious DiseasesSpecies SpecificityPlatyhelminthsAnimalsAnimal Science and ZoologyParasitologyMonogeneamedia_commonParasitology
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Diclidophora merlangi (Monogenea: Diclidophoridae) on Atlantic cod, Gadus morhua.

2006

Diclidophora merlangi (Kuhn, in Nordmann, 1832), as species specific to whiting, Merlangius merlangus (Linnaeus, 1758), is reported and described for the first time on the gills of Atlantic cod Gadus morhua (Linnaeus, 1758). Of the about 1,200 cod examined in this article, only 2 specimens of D. merlangi occurred on 2 fish, suggesting that they represented accidental infections. The 2 specimens showed specific traits of D. merlangi, but their size was considerably smaller than that of D. merlangi on whiting. Principal-component analyses showed that the morphology of the specimens on cod was more similar to that of D. merlangi than those of other congeneric species from the North Atlantic, a…

GillGillsMalePrincipal Component AnalysisbiologyReproductionZoologyTrematode InfectionsGadidaebiology.organism_classificationWhitingHost-Parasite InteractionsFisheryMerlangius merlangusFish DiseasesGadus morhuaPlatyhelminthsParasite hostingGadusAnimalsParasitologyFemaleAtlantic codEcology Evolution Behavior and SystematicsMonogeneaThe Journal of parasitology
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