Search results for "Porifera"

showing 10 items of 196 documents

Contribution of sponge genes to unravel the genome of the hypothetical ancestor of Metazoa (Urmetazoa)

2001

Recently the term Urmetazoa, as the hypothetical metazoan ancestor, was introduced to highlight the finding that all metazoan phyla including the Porifera (sponges) are derived from one common ancestor. Sponges as the evolutionarily oldest, still extant phylum, are provided with a complex network of structural and functional molecules. Analyses of sponge genomes from Demospongiae (Suberites domuncula and Geodia cydonium), Calcarea (Sycon raphanus) and Hexactinellida (Aphrocallistes vastus) have contributed also to the reconstruction of the evolutionary position of Metazoa with respect to Fungi. Furthermore, these analyses have provided evidence that the characteristic evolutionary novelties…

AnkyrinsMolecular Sequence DataReceptors Cell SurfaceEvolution MolecularGeneticsMelanogasterAnimalsHumansAmino Acid SequenceViridiplantaeSycon raphanusPhylogenyCaenorhabditis elegansGeneticsGenomeSequence Homology Amino AcidbiologyPhylumImmunityGeneral Medicinebiology.organism_classificationPoriferaSuberites domunculaSpongeGenesHomo sapiensGene
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On the role of D-glucuronic acid in the aggregation of cells from the marine sponge Geodia cydonium.

1979

Abstract The aggregation receptor (AR) from the marine sponge GEODIA CYDONIUM was analyzed with respect to its monosaccharide composition. Three major sugars ( D -galactose, D -glucose and D -glucuronic acid) accounted for about 85 % of the total carbohydrate. Negative results with different lectins directed against D -galactosyl, N -acetyl- D -galactosaminyl and N -acetyl- D -glucosaminyl groups, respectively, showed that these sugars are serologically unreactive in AR. Positive serological reactions were obtained with CONCANAVALIN A and LIMULUS POLYPHEMUS agglutinin. AR also reacted strongly with the basic polymer poly- L -lysine. Reaggregation experiments performed on the basis of these …

Binding SitesbiologyImmunologyGalactoseGlucuronatesCarbohydratebiology.organism_classificationGlucuronic acidBinding CompetitiveGalactosidasesPoriferaSpongechemistry.chemical_compoundAgglutininGlucosechemistryBiochemistryConcanavalin ALimulusGalactosebiology.proteinAnimalsGeodiaDevelopmental BiologyCell AggregationDevelopmental and comparative immunology
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Determination of lectin-cell-binding parameters by a new agglutination technique.

1992

We applied a recently described technique which is based on a light transmission/scattering method to determine the association characteristics of the Geodia lectin to sheep erythrocytes. The agglutination assays were performed in a total volume of 3 ml with 5.4 x 10(6) erythrocytes/ml. At a concentration of 360 ng/ml 50% of the lectin molecules were bound to the cells within the first 10 s of incubation. Scatchard analyses revealed an association constant (K(a)) of 0.9 +/- 0.1 x 10(8) M-1 and a number of 3.8 +/- 0.6 x 10(6) lectin binding sites on one erythrocyte. The method was also successfully applied to determine quantitatively the inhibitory potential of sugars competing with cell sur…

BiochemistryAgglutination techniquechemistry.chemical_compoundLectinsmedicineAnimalsLactoseIncubationchemistry.chemical_classificationScatchard plotChromatographySheepbiologyChemistryLectinHemagglutination TestsHemagglutination Inhibition TestsPoriferaRed blood cellAgglutination (biology)Kineticsmedicine.anatomical_structureReceptors MitogenImmunologyCalibrationbiology.proteinGlycoproteinProtein BindingBiological chemistry Hoppe-Seyler
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Porifera a reference phylum for evolution and bioprospecting: the power of marine genomics

2005

The term Urmetazoa, as the hypothetical metazoan ancestor, was introduced to highlight the finding that all metazoan phyla including the Porifera [sponges] derived from one common ancestor. Analyses of sponge genomes, from Demospongiae, Calcarea and Hexactinellida have permitted the reconstruction of the evolutionary trail from Fungi to Metazoa. This has provided evidence that the characteristic evolutionary novelties of Metazoa existing in Porifera share high sequence similarities and in some aspects also functional similarities to related polypeptides found in other metazoan phyla. It is surprising that the genome of Porifera is large and comprises substantially more genes than Protostomi…

BioprospectingEcologyChemistryPhylumZoologyGenomicsGenomicsGeneral MedicineBiologybiology.organism_classificationGenomePoriferaEvolution MolecularSpongeEvolutionary biologyAnimalsTaxonomy (biology)Living fossilAncestorThe Keio Journal of Medicine
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Effects of marine 2-polyprenyl-1,4-hydroquinones on phospholipase A2 activity and some inflammatory responses.

1995

Three 2-polyprenyl-1,4-hydroquinone derivatives (2-heptaprenyl-1,4-hydroquinone: IS1, 2-octaprenyl-1,4-hydroquinone: IS2 and 2-[24-hydroxy]-octaprenyl-1,4-hydroquinone: IS3) isolated from the Mediterranean sponge Ircinia spinosula, were evaluated for effects on phospholipase A2 activity of different origin (Naja naja venom, human recombinant synovial fluid and bee venom), as well as on human neutrophil function and mouse ear oedema induced by 12-O-tetradecanoylphorbol 13-acetate (TPA). IS1 interacted minimally with these responses. In contrast, IS2 and IS3 inhibited human recombinant synovial phospholipase A2 in a concentration-dependent manner, with minor effects on the rest of the enzymes…

Blood PlateletsLeukocyte migrationLeukotriene B4Cell SurvivalNeutrophilsPharmacologyBiologyIn Vitro TechniquesLeukotriene B4Phospholipases Achemistry.chemical_compoundMicePhospholipase A2SuperoxidesMicrosomesSynovial fluidAnimalsEdemaHumansPharmacologyPhospholipase AL-Lactate DehydrogenasePancreatic ElastaseAnti-Inflammatory Agents Non-SteroidalDegranulationBiological activityHydroquinonesPoriferaThromboxane B2Thromboxane B2Phospholipases A2Biochemistrychemistrybiology.proteinTetradecanoylphorbol AcetateEuropean journal of pharmacology
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Matrix-mediated canal formation in primmorphs from the sponge Suberites domuncula involves the expression of a CD36 receptor-ligand system.

2004

Sponges (Porifera), represent the phylogenetically oldest metazoan phylum still extant today. Recently, molecular biological studies provided compelling evidence that these animals share basic receptor/ligand systems, especially those involved in bodyplan formation and in immune recognition, with the higher metazoan phyla. An in vitro cell/organ-like culture system, the primmorphs, has been established that consists of proliferating and differentiating cells, but no canals of the aquiferous system. We show that after the transfer of primmorphs from the demosponge Suberites domuncula to a homologous matrix (galectin), canal-like structures are formed in these 3D-cell aggregates. In parallel …

CD36 AntigensTime FactorsGalectinsRecombinant Fusion ProteinsAmino Acid MotifsMolecular Sequence DataGene ExpressionChick EmbryoLigandsEvolution MolecularDemospongeAllantoisSequence Analysis ProteinAnimalsAmino Acid SequenceCloning MolecularReceptorCells CulturedPhylogenyGalectinCell AggregationGlutathione TransferasebiologyDose-Response Relationship DrugMolecular StructureSequence Homology Amino AcidCell growthCell DifferentiationCell BiologyAnatomyChorionLigand (biochemistry)biology.organism_classificationIn vitroCell biologyExtracellular MatrixPoriferaProtein Structure TertiarySuberites domunculaSpongeThrombospondinsCell DivisionNaphthoquinonesJournal of cell science
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Flexible minerals: self-assembled calcite spicules with extreme bending strength.

2013

Flexi-Fibers Glass or metal fibers can show incredible flexibility. Natalio et al. (p. 1298 ; see the Perspective by Sethmann ) used the protein silicatein-α, which is responsible for the biomineralization of silicates in sponges, to guide the formation of spicules made of calcite. These synthetic spicules could be bent to a high degree because of their inherent elasticity, whilst retaining the ability to guide light.

CalciteSpiculeMultidisciplinaryMaterials scienceCalcareous spongebiologySyconMineralogybiology.organism_classificationCathepsinsAmorphous solidCalcium CarbonatePoriferachemistry.chemical_compoundSponge spiculechemistryFlexural strengthMicroscopy Electron TransmissionSpectroscopy Fourier Transform InfraredAnimalsNanoparticlesStress MechanicalComposite materialBiomineralizationScience (New York, N.Y.)
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The Understanding of the Metazoan Skeletal System, Based on the Initial Discoveries with Siliceous and Calcareous Sponges

2017

Initiated by studies on the mechanism of formation of the skeletons of the evolutionary oldest still extant multicellular animals, the sponges (phylum Porifera) have provided new insights into the mechanism of formation of the Ca-phosphate/hydroxyapatite skeleton of vertebrate bone. Studies on the formation of the biomineral skeleton of sponges revealed that both the formation of the inorganic siliceous skeletons (sponges of the class of Hexactinellida and Demospongiae) and of the calcareous skeletons (class of Calcarea) is mediated by enzymes (silicatein: polymerization of biosilica; and carbonic anhydrase: deposition of Ca-carbonate). Detailed studies of the initial mineralization steps i…

Calcium Phosphates0301 basic medicineenzyme-mediated biomineral formationPolymerscarbonic anhydrasePharmaceutical ScienceMineralogyReviewBiologyMineralization (biology)Calcium Carbonateamorphous nanoparticles03 medical and health scienceschemistry.chemical_compoundPolyphosphatesCarbonic anhydraseDrug DiscoveryAnimalsHumansbone-hydroxyapatitebiosilicaPharmacology Toxicology and Pharmaceutics (miscellaneous)lcsh:QH301-705.5SkeletonCarbonic Anhydraseschemistry.chemical_classificationInorganic polymerPhylum PoriferaPolyphosphatePhosphatePoriferaDurapatite030104 developmental biologyEnzymechemistryBiochemistrylcsh:Biology (General)calcium carbonate bio-seedsbiology.proteinCalcareousalkaline phosphataseinorganic polyphosphateMarine Drugs
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Silicateins, the major biosilica forming enzymes present in demosponges: protein analysis and phylogenetic relationship.

2007

Silicateins are enzymes, which are restricted to sponges (phylum Porifera), that mediate the catalytic formation of biosilica from monomeric silicon compounds. The silicatein protein is compartmented in the sponges in the axial filaments which reside in the axial canals of the siliceous spicules. In the present study silicatein has been isolated from the freshwater sponge Lubomirskia baicalensis where it occurs in isoforms with sizes of 23 kDa, 24 kDa and 26 kDa. Since the larger protein is glycosylated we posit that it is a processed form of one of the smaller size forms. The silicatein isoforms are post-translationally modified by phosphorylation; at least four isoforms exist with pI's of…

Cathepsin LMolecular Sequence DataCathepsin LDemospongeCatalytic triadGeneticsAnimalsAmino Acid SequenceGenePeptide sequencePhylogenyCathepsinbiologySequence Homology Amino AcidGeneral MedicineExonsbiology.organism_classificationSilicon DioxideCathepsinsIntronsPoriferaSuberites domunculaSpongeCysteine EndopeptidasesMicroscopy ElectronBiochemistrybiology.proteinGene
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Purification and characterization of two exopolyphosphatases from the marine sponge Tethya lyncurium

1995

Abstract Two exopolyphosphatases (exopolyphosphatase I and II; EC 3.6.1.11) which release orthophosphate from inorganic polyphosphates have been detected and purified for the first time from a marine sponge, Tethya lyncurium . Exopolyphosphatase I has a molecular mass of 45 kDa, a pH optimum of 5.0 and does not require divalent cations for activity, while exopolyphosphatase II has a molecular mass of 70 kDa, a pH optimum of 7.5 and displays optimal activity in the presence of Mg 2+ ions. Final purification of the enzymes could be achieved by affinity chromatography on polyphosphate-modified zirconia. The mode of action of both enzymes was found to be processive. Orthophosphate is the sole p…

Cations DivalentBiophysicsAdenylate kinaseBiochemistryPyrophosphateDivalentchemistry.chemical_compoundPolyphosphatesProtein purificationAnimalsMolecular BiologyExopolyphosphatasechemistry.chemical_classificationChromatographyMolecular massPolyphosphateTemperatureHydrogen-Ion ConcentrationAcid Anhydride HydrolasesPoriferaMolecular WeightKineticsEnzymechemistryBiochemistryAdenylyl Cyclase InhibitorsBiochimica et Biophysica Acta (BBA) - General Subjects
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