Search results for "Potato"

showing 10 items of 116 documents

Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Variation in Hsp70 Levels after Cold Shock: Signs of Evolutionary Responses to Thermal Selection among Leptinotarsa decemlineata Populations

2012

Individuals of widely spread species are expected to show local adaption in temperature tolerance as they encounter a range of thermal conditions. We tracked thermal adaptations of the Colorado potato beetle (Leptinotarsa decemlineata) that invaded Europe within the last 100 years. It has occupied various conditions although, like the majority of invasive species, it lost a measurable amount of neutral genetic variation due to bottleneck effect when it invaded Europe. We exposed diapausing beetles originated from three different latitudes (54°N, 59°N, 60°N) to cold shock (−5°C, 1.5 hrs) in order to test if beetles from the northern populations express differential levels of cold-induced and…

0106 biological sciencesHeredityRange (biology)AcclimatizationPopulationlcsh:MedicineIntroduced speciesDiapause010603 evolutionary biology01 natural sciencesInvasive species03 medical and health sciencesGeneticsAnimalsHspHSP70 Heat-Shock Proteinslcsh:ScienceeducationBiologyLeptinotarsa030304 developmental biologyEvolutionary Biology0303 health scienceseducation.field_of_studyMultidisciplinaryEcologyPopulation BiologybiologyEcologylcsh:RColorado potato beetlekoloradonkuoriaineninvaasio15. Life on landbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionCold TemperatureColeoptera13. Climate actionta1181lcsh:QlämpötilaAdaptationPopulation GeneticsResearch ArticlePLoS ONE
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Can Indirect Herbicide Exposure Modify the Response of the Colorado Potato Beetle to an Organophosphate Insecticide?

2018

AbstractOrganisms live in complex multivariate environments. In agroecosystems, this complexity is often human-induced as pest individuals can be exposed to many xenobiotics simultaneously. Predicting the effects of multiple stressors can be problematic, as two or more stressors can have interactive effects. Our objective was to investigate whether indirect glyphosate-based herbicide (GBH) exposure of the host plant has interactive effects in combination with an insecticide (azinphos-methyl) on an invasive pest Colorado potato beetle (Leptinotarsa decemlineata Say). We tested the effects of GBH and insecticide on the survival, insecticide target genes expression (acetylcholinesterase genes)…

0106 biological sciencesInsecticidesCarbamateColoradomedicine.medical_treatmentGlutathione reductase010501 environmental sciencesPharmacology010603 evolutionary biology01 natural sciencesSuperoxide dismutasechemistry.chemical_compoundmedicineAnimalsGlutathione TransferaseSolanum tuberosum0105 earth and related environmental scienceschemistry.chemical_classificationEcologybiologyHerbicidesGlutathione peroxidaseOrganophosphateColorado potato beetlefood and beveragesGeneral MedicineGlutathionebiology.organism_classificationOrganophosphatesColeopterachemistryInsect Sciencebiology.proteinAzinphos-methylJournal of Economic Entomology
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Stress for invasion success? Temperature stress of preceding generations modifies the response to insecticide stress in an invasive pest insect

2012

Adaptation to stressful environments is one important factor influencing species invasion success. Tolerance to one stress may be complicated by exposure to other stressors experienced by the preceding generations. We studied whether parental temperature stress affects tolerance to insecticide in the invasive Colorado potato beetle Leptinotarsa decemlineata. Field-collected pyrethroid-resistant beetles were reared under either stressful (17°C) or favourable (23°C) insecticide-free environments for three generations. Then, larvae were exposed to pyrethroid insecticides in common garden conditions (23°C). Beetles were in general tolerant to stress. The parental temperature stress alone affect…

0106 biological sciencesIntegrated pest managementadaptive phenotypic plasticitycarry-overcross-generational effect010603 evolutionary biology01 natural sciencesInvasive speciesinvasive speciesToxicology03 medical and health sciencespyrethroidsGeneticsLeptinotarsaEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesbiologystress toleranceStressorColorado potato beetleHormesisspecies rangeOriginal Articlesbiology.organism_classificationsub-lethal effects13. Climate actionta1181PEST analysisAdaptationGeneral Agricultural and Biological SciencesEvolutionary Applications
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Is a change in juvenile hormone sensitivity involved in range expansion in an invasive beetle?

2015

Introduction: It has been suggested that rapid range expansion could proceed through evolution in the endocrinological machinery controlling life-history switches. Based on this we tested whether the Colorado potato beetle, Leptinotarsa decemlineata, which has rapidly expanded its range across latitudinal regions in Europe, and shows photoperiodic adaptation in overwintering initiation, has different sensitivities to juvenile hormone (JH) manipulation along a latitudinal gradient. Results: A factorial experiment where beetles were reared either under a long or short day photoperiod was performed. Hormone levels were manipulated by topical applications. An allatostatin mimic, H17, was used t…

0106 biological sciencesPopulationZoology010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundjuvenile hormoneseducationLeptinotarsaOverwinteringEcology Evolution Behavior and Systematics030304 developmental biologykovakuoriaiset0303 health scienceseducation.field_of_studybiologyEcologyResearchColorado potato beetleAllatostatinFecunditybiology.organism_classificationchemistryJuvenile hormoneAnimal Science and ZoologyPyriproxyfen
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Validation of ADAM10 metalloprotease as aBacillus thuringiensisCry3Aa toxin functional receptor in Colorado potato beetle (Leptinotarsa decemlineata)

2016

Bacillus thuringiensis parasporal crystal proteins (Cry proteins) are insecticidal pore-forming toxins that bind to specific receptor molecules on the brush border membrane of susceptible insect midgut cells to exert their toxic action. In the Colorado potato beetle (CPB), a coleopteran pest, we previously proposed that interaction of Cry3Aa toxin with a CPB ADAM10 metalloprotease is an essential part of the mode of action of this toxin. Here, we annotated the gene sequence encoding an ADAM10 metalloprotease protein (CPB-ADAM10) in the CPB genome sequencing project, and using RNA interference gene silencing we demonstrated that CPB-ADAM10 is a Cry3Aa toxin functional receptor in CPB. Cry3Aa…

0301 basic medicineBrush bordermedicine.diagnostic_testbiologyToxinProteolysis030106 microbiologyColorado potato beetleMidgutmedicine.disease_causebiology.organism_classificationMicrobiology03 medical and health sciencessurgical procedures operative030104 developmental biologyBiochemistryRNA interferenceInsect ScienceBacillus thuringiensisGeneticsmedicineReceptorMolecular Biologycirculatory and respiratory physiologyInsect Molecular Biology
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High genetic stability of potato yellow mosaic Panama virus infecting tomato in Panama

2018

The relevant regions in Panama involved in commercial tomato production, including the Chiriqui, Veraguas, Herrera, Los Santos and Panama Oeste provinces, were surveyed for the distribution and genetic diversity of potato yellow mosaic Panama virus (PYMPV) in the growing seasons of 2011 and 2012. A total of 28 tomato plots were surveyed and 314 individual tomato plants were sampled. DNA was extracted from each plant for a subsequent rolling circle amplification (RCA) analysis, to confirm the presence of begomovirus infections. The samples displaying a positive RCA reaction were subsequently analysed by PCR with a specific primer pair to identify PYMPV. This virus was detected in samples col…

0301 basic medicineCloningGenetic diversityVeterinary medicinePanamaBegomovirusfood and beveragesBegomovirus . Rolling circle amplification . Single-strand conformation polymorphism . Phylogenetic analysis . Solanum lycopersicumSettore AGR/12 - Patologia VegetaleSingle-strand conformation polymorphismPlant ScienceBiologybiology.organism_classificationVirus03 medical and health sciences030104 developmental biologyRolling circle replicationPotato yellow mosaic Panama virus
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Different rates of spontaneous mutation of chloroplastic and nuclear viroids as determined by high-fidelity ultra-deep sequencing

2017

[EN] Mutation rates vary by orders of magnitude across biological systems, being higher for simpler genomes. The simplest known genomes correspond to viroids, subviral plant replicons constituted by circular non-coding RNAs of few hundred bases. Previous work has revealed an extremely high mutation rate for chrysanthemum chlorotic mottle viroid, a chloroplastreplicating viroid. However, whether this is a general feature of viroids remains unclear. Here, we have used high-fidelity ultra-deep sequencing to determine the mutation rate in a common host (eggplant) of two viroids, each representative of one family: the chloroplastic eggplant latent viroid (ELVd, Avsunviroidae) and the nuclear pot…

0301 basic medicineMutation rateChloroplastsViroidvirusesPospiviroidaeArtificial Gene Amplification and ExtensionPlant ScienceSelf-CleavageVirus ReplicationBiochemistryPolymerase Chain ReactionGenomeDatabase and Informatics MethodsSequencing techniquesRibozymeNucleic AcidsRibozymesBiology (General)GeneticsHigh-Throughput Nucleotide Sequencingfood and beveragesRNA sequencingViroidsEnzymesAvsunviroidaeDeletion MutationVirusesPhysical SciencesRNA ViralIn-VivoSequence AnalysisResearch ArticleSubstitution MutationHammerhead RibozymesQH301-705.5Materials by StructureBioinformaticsEvolutionMaterials ScienceImmunologyPlant PathogensGenerationReplicationBiologyMicrobiology03 medical and health sciencesSequence Motif AnalysisVirologyGeneticsSolanum melongenaRNA-PolymeraseMolecular BiologyPotato spindle tuber viroidPlant DiseasesMatter030102 biochemistry & molecular biologyPoint mutationOrganismsBiology and Life SciencesProteinsRNAReverse Transcriptase-Polymerase Chain ReactionRC581-607Plant Pathologybiology.organism_classificationVirologyResearch and analysis methodsMolecular biology techniques030104 developmental biologyMutagenesisOligomersMutationEnzymologyRNAMotifParasitologyImmunologic diseases. AllergyPLOS Pathogens
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Genetic variation in growth and development time under two selection regimes in Leptinotarsa decemlineata

2008

It is possible to predict the potential range of a species on the basis of its ecological characteristics and those of the invaded ecosystem. The existence of genetic variation indicates a species' potential to respond to new environmental conditions, thus facilitating its success as an invader. Accordingly, evolutionary and ecological approaches are needed to identify the factors explaining both species' range and their potential to invade new areas. We combined these two approaches and studied whether genetic variation in life-history traits under abiotic (temperature) and biotic (host plant) selection pressures contributes to the potential range expansion of Leptinotarsa decemlineata Say…

Abiotic componentbiologyEcologyRange (biology)Insect ScienceGenetic variationColorado potato beetleEcosystemGenetic variabilityHeritabilitybiology.organism_classificationLeptinotarsaEcology Evolution Behavior and SystematicsEntomologia Experimentalis et Applicata
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Innovative non-thermal technologies affecting potato tuber and fried potato quality

2019

Abstract Background Potatoes are important tubers for human consumption, providing an essential source of energy and great nutritional characteristics for human health. However, before consumption, potato tubers need to be stored and processed. As frying is the most common technique used in potato processing, fried potato is the most important processed potato product. Some food characteristics, provided by the frying process, are considered desirable, but others are harmful to human health and, thereby the main challenge is to reduce the formation of the undesirable characteristics, without compromising the sensorial attributes. Scope and approach In this review, the origin, economic impor…

Acrylamide0303 health sciences030309 nutrition & dieteticsbusiness.industrymedia_common.quotation_subject04 agricultural and veterinary sciencesQuality040401 food sciencemergent technologiesBiotechnologyPotato processing03 medical and health sciencesHuman health0404 agricultural biotechnologyFryingEnvironmental scienceQuality (business)Potato tuberbusinessOil uptakeFried potatoesNon-thermal technologiesFood ScienceBiotechnologymedia_commonTrends in Food Science & Technology
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