Search results for "R1"

showing 10 items of 1016 documents

Shedding Light on the Formation and Structure of Kombucha Biofilm Using Two-Photon Fluorescence Microscopy

2021

Kombucha pellicles are often used as inoculum to produce this beverage and have become a signature feature. This cellulosic biofilm produced by acetic acid bacteria (AAB) involves yeasts, which are also part of the kombucha consortia. The role of microbial interactions in thede novoformation and structure of kombucha pellicles was investigated during the 3 days following inoculation, using two-photon microscopy coupled with fluorescent staining. Aggregated yeast cells appear to serve as scaffolding to which bacterial cellulose accumulates. This initial foundation leads to a layered structure characterized by a top cellulose-rich layer and a biomass-rich sublayer. This sublayer is expected t…

0106 biological sciencesMicrobiology (medical)Kombuchatwo-photon fluorescence microscopyinteraction01 natural sciencesMicrobiologybiofilm03 medical and health scienceschemistry.chemical_compound[SPI]Engineering Sciences [physics]010608 biotechnologyMicroscopyCelluloseAcetic acid bacteria030304 developmental biologyOriginal Research0303 health sciencesbiologyBiofilmbiology.organism_classificationTwo photon fluorescenceYeastQR1-502cellulosechemistryBacterial celluloseBiophysicskombucha[SDV.AEN]Life Sciences [q-bio]/Food and NutritionFrontiers in Microbiology
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Influence of Diet, Sex, and Viral Infections on the Gut Microbiota Composition of Spodoptera exigua Caterpillars

2020

The gut microbiota plays essential roles in processes related with metabolism, physiology, and immunity in all organisms, including insects. In the present work, we performed a broad analysis of the Spodoptera exigua gut microbiota, a major agricultural pest. We analyzed the influence of multiple parameters such as diet, geographic location, sex, or viral infections on S. exigua caterpillar gut microbiota composition. Our study revealed a high variability in bacterial composition among individuals, and a major influence of environmental bacteria (including those acquired through diet) on the gut microbiota composition, supporting previous studies that claim resident microbiota are lacking i…

0106 biological sciencesMicrobiology (medical)lcsh:QR1-502ZoologySpodopteraGut flora01 natural sciencesdigestive systemMicrobiologylcsh:MicrobiologyLepidoptera genitalia03 medical and health sciencesImmunitySpodoptera exiguaExiguamicrobiota16S rRNACaterpillarOriginal Research030304 developmental biology0303 health sciencesbiology030306 microbiologyMicrobiotafungiCorrectionbiology.organism_classification3. Good healthLepidoptera010602 entomologyViral infectionComposition (visual arts)lepidopteraviral infectionBacteriaFrontiers in Microbiology
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Rhizosphere Bacterial Networks, but Not Diversity, Are Impacted by Pea-Wheat Intercropping

2021

International audience; Plant-plant associations, notably cereal-legume intercropping, have been proposed in agroecology to better value resources and thus reduce the use of chemical inputs in agriculture. Wheat-pea intercropping allows to decreasing the use of nitrogen fertilization through ecological processes such as niche complementarity and facilitation. Rhizosphere microbial communities may account for these processes, since they play a major role in biogeochemical cycles and impact plant nutrition. Still, knowledge on the effect of intecropping on the rhizosphere microbiota remains scarce. Especially, it is an open question whether rhizosphere microbial communities in cereal-legume i…

0106 biological sciencesMicrobiology (medical)peaBiodiversity01 natural sciencesMicrobiologybacterial communityCrop03 medical and health scienceswheatGammaproteobacteriaOriginal Research030304 developmental biologybiodiversity2. Zero hunger0303 health sciencesRhizospherebiologyAlphaproteobacteriaBacteroidetesfood and beveragesIntercropping15. Life on landbiology.organism_classificationQR1-502Agronomynetworks[SDE]Environmental Sciencesrhizosphereintercropping010606 plant biology & botanyAcidobacteria
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Innovative Alcoholic Drinks Obtained by Co-Fermenting Grape Must and Fruit Juice

2019

In this study, Cabernet Sauvignon and Chardonnay musts, and fruit juices from cherry, kiwi, peach, and strawberry were co-fermented with Saccharomyces cerevisiae EC1118 and Torulaspora delbrueckii UMY196 at two different proportions (80:20 (v/v) and 60:40 (v/v)). The most pleasant fruit-based drink was obtained with Cabernet Sauvignon must and kiwi juice in a proportion of 60:40 and fermented with T. delbrueckii. This beverage was produced in higher volume to simulate a scale-up, and the aromatic profile, sensory description, and consumer acceptability were determined. The most powerful odorants of the kiwi-based drink were ethyl octanoate, phenylethanal, ethyl hexanoate, vinyl-guaiacol, be…

0106 biological sciencesNonanalEndocrinology Diabetes and Metabolismlcsh:QR1-502yeastssecondary metabolite01 natural sciencesBiochemistrySensory analysisfruit wineslcsh:MicrobiologyArticlechemistry.chemical_compound0404 agricultural biotechnologyTorulaspora delbrueckii010608 biotechnologyFood sciencegrape mustMolecular Biologyfruit winebiologysecondary metabolitesEthyl hexanoatefood innovation04 agricultural and veterinary sciencesbiology.organism_classification040401 food sciencechemistryOdorKiwikiwi juiceFermentationFruit juice
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First evidence of underwater sounds emitted by the living fossils Lepidurus lubbocki and Triops cancriformis (Branchiopoda: Notostraca)

2021

Sound is the most effective means of communication in marine and freshwater ecosystems. However, no data about acoustic emissions from non-malacostracan crustaceans are currently available, so their ability to produce sounds is unknown. For the first time, this study investigated the sound produced by 2 tadpole shrimp species,Triops cancriformisandLepidurus lubbocki.L. lubbockiindividuals were collected from a natural temporary pond in Sicily (Italy), whereasT. cancriformisindividuals were obtained from eggs contained in sediment from a rock pool in Sardinia (Italy). In the laboratory, experimental tanks with the animals (one species at a time) were acoustically monitored. Both species prod…

0106 biological sciencesPassive acoustic monitoringQH301-705.5Settore BIO/05 - ZoologiaBranchiopodaZoologyPassive acoustic monitoringAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesMicrobiologyNotostracaBiology (General)Ecology Evolution Behavior and SystematicsLepidurusSoundsEcologybiology010604 marine biology & hydrobiologyNotostracabiology.organism_classificationTemporal patternQR1-502Triops cancriformisLiving fossilAquatic Biology
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Assessment of genetically modified maize Bt11 x MIR162 x 1507 x GA21 and three subcombinations independently of their origin, for food and feed uses …

2018

In this opinion, the GMO Panel assessed the four-event stack maize Btll x MIR162 x 1507 x GA21 and three of its subcombinations, independently of their origin. The GMO Panel previously assessed the four single events and seven of their combinations and did not identify safety concerns. No new data on the single events or the seven subcombinations leading to modification of the original conclusions were identified. Based on the molecular, agronomic, phenotypic and compositional characteristics, the combination of the single events in the four-event stack maize did not give rise to food/feed safety issues. Based on the nutritional assessment of the compositional characteristics of maize Btll …

0106 biological sciencesVeterinary (miscellaneous)[SDV]Life Sciences [q-bio]Context (language use)Plant Science010501 environmental sciencesBiology01 natural sciencesMicrobiologyGA21Plant scienceEnvironmental safetyinsect resistant and herbicide tolerantmaize (Zea mays)15070105 earth and related environmental sciences2. Zero hungerGenetically modified maizebusiness.industryGMOMIR162Bt11BiotechnologyGenetically modified organismScientific OpinionAnimal Science and ZoologyParasitologybusiness010606 plant biology & botanyFood Science
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Consequence of Histoincompatibility beyond GvH-Reaction in Cytomegalovirus Disease Associated with Allogeneic Hematopoietic Cell Transplantation: Cha…

2021

Hematopoietic cell (HC) transplantation (HCT) is the last resort to cure hematopoietic malignancies that are refractory to standard therapies. Hematoablative treatment aims at wiping out tumor cells as completely as possible to avoid leukemia/lymphoma relapse. This treatment inevitably co-depletes cells of hematopoietic cell lineages, including differentiated cells that constitute the immune system. HCT reconstitutes hematopoiesis and thus, eventually, also antiviral effector cells. In cases of an unrelated donor, that is, in allogeneic HCT, HLA-matching is performed to minimize the risk of graft-versus-host reaction and disease (GvHR/D), but a mismatch in minor histocompatibility antigens …

0301 basic medicine030106 microbiologyCytomegalovirusGraft vs Host DiseaseCD8 T cellsReviewHuman leukocyte antigengraft-versus-host disease (GvHD)MicrobiologyMinor Histocompatibility AntigensMice03 medical and health sciencesImmune systemavidityVirologyMinor histocompatibility antigenmedicineAnimalsHumansTransplantation HomologousCytotoxic T cellImmunodeficiencybusiness.industryHematopoietic Stem Cell Transplantationcytomegalovirus diseasehematopoietic reconstitutionhematopoietic cell transplantation (HCT)medicine.diseaseQR1-502Transplantationantigen presentationLeukemia030104 developmental biologyInfectious DiseasesHematologic NeoplasmsCytomegalovirus InfectionsImmunologybusinessCD8Viruses
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Novel Autotrophic Organisms Contribute Significantly to the Internal Carbon Cycling Potential of a Boreal Lake

2018

ABSTRACT Oxygen-stratified lakes are typical for the boreal zone and also a major source of greenhouse gas emissions in the region. Due to shallow light penetration, restricting the growth of phototrophic organisms, and large allochthonous organic carbon inputs from the catchment area, the lake metabolism is expected to be dominated by heterotrophic organisms. In this study, we test this assumption and show that the potential for autotrophic carbon fixation and internal carbon cycling is high throughout the water column. Further, we show that during the summer stratification carbon fixation can exceed respiration in a boreal lake even below the euphotic zone. Metagenome-assembled genomes an…

0301 basic medicine030106 microbiologyHeterotrophDNA RibosomaljärvetMicrobiologyCarbon cycle03 medical and health sciencesWater columnTotal inorganic carbonRNA Ribosomal 16SVirologyCluster AnalysisPhotic zoneAnaerobiosis14. Life underwaterAutotrophFinlandPhylogeny030304 developmental biologyTotal organic carbon0303 health sciencesAutotrophic ProcessesmetagenomicsPhototroph030306 microbiologygreenhouse gas emissionsEcologyhiilen kiertoCarbon fixationSequence Analysis DNAiron oxidizers15. Life on landBiotaCarbonQR1-502Food webLakesMikrobiologi13. Climate actionmikro-organismitredox gradientEnvironmental sciencechemoautotrophyResearch ArticlemBio
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Next‐Generation Sequencing‐Based RiboMethSeq Protocol for Analysis of tRNA 2′‐O‐Methylation

2017

Analysis of RNA modifications by traditional physico‐chemical approaches is labor  intensive,  requires  substantial  amounts  of  input  material  and  only  allows  site‐by‐site  measurements.  The  recent  development  of  qualitative  and  quantitative  approaches  based  on   next‐generation sequencing (NGS) opens new perspectives for the analysis of various cellular RNA  species.  The  Illumina  sequencing‐based  RiboMethSeq  protocol  was  initially  developed  and  successfully applied for mapping of ribosomal RNA (rRNA) 2′‐O‐methylations. This method also  gives excellent results in the quantitative analysis of rRNA modifications in different species and  under varying growth condi…

0301 basic medicine2 -O-methylationSaccharomyces cerevisiaelcsh:QR1-502Biochemistrylcsh:MicrobiologyDNA sequencingdeleted strain03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN] deleted strainTrmH 2′‐O‐methylationMolecular BiologytRNAIllumina dye sequencingRiboMethSeq TRM3Genetics RiboMethSeq030102 biochemistry & molecular biologybiologytRNA; 2′‐O‐methylation; RiboMethSeq; high‐throughput sequencing; deleted strain;  TrmH; TRM32'-O-methylationRNAhigh-throughput sequencing[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyMethylation  TrmHRibosomal RNAbiology.organism_classification030104 developmental biology high‐throughput sequencingTRM3Transfer RNA
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Preliminary evidence of reductive stress in human cytotoxic T cells following exercise.

2018

This study investigated immunophenotypic differences in intracellular thiol redox state of peripheral blood mononuclear cells (PBMCs) isolated from trained [ n = 9, means ± SD: age 28 ± 5 yr; (body mass index) BMI 23.2 ± 2.6 kg/m2; V̇o2max (maximal oxygen intake)56.9 ± 6.1 ml·kg−1·min−1] and recreationally active (RA, n = 11, means ± SD: age 27 ± 6 yr; BMI 24.2 ± 3.7 kg/m2; V̇o2max 45.1 ± 6.4 ml·kg−1·min−1) participants before and after a maximal aerobic exercise tolerance test. Blood samples were taken before (Pre), during (sample acquired at 70% maximum heart rate), immediately after (Post + 0), and 15 min postexercise (Post + 15). PBMCs were isolated, and reduced thiol analysis [fluores…

0301 basic medicineAdultMalemedicine.medical_specialtyPhysiologyLymphocytePopulationPeripheral blood mononuclear cellRC120003 medical and health sciencesLeukocyte Count0302 clinical medicineOxygen ConsumptionStress PhysiologicalPhysiology (medical)Internal medicinemedicineLeukocytesAerobic exerciseCytotoxic T cellHumanseducationExercisechemistry.chemical_classificationeducation.field_of_studyChemistryFlow Cytometry030104 developmental biologyEndocrinologymedicine.anatomical_structureQR180ThiolExercise TestLeukocytes MononuclearFemaleThiol redox030217 neurology & neurosurgeryCD8T-Lymphocytes CytotoxicJournal of applied physiology (Bethesda, Md. : 1985)
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