Search results for "Registration"

showing 10 items of 146 documents

Seawater carbonate chemistry and kelp densities and coral coverages at three study locations and photosynthesis and calcification of corals measured …

2021

Ocean warming is altering the biogeographical distribution of marine organisms. In the tropics, rising sea surface temperatures are restructuring coral reef communities with sensitive species being lost. At the biogeographical divide between temperate and tropical communities, warming is causing macroalgal forest loss and the spread of tropical corals, fishes and other species, termed “tropicalization”. A lack of field research into the combined effects of warming and ocean acidification means there is a gap in our ability to understand and plan for changes in coastal ecosystems. Here, we focus on the tropicalization trajectory of temperate marine ecosystems becoming coral-dominated systems…

Ocean Acidification International Coordination Centre (OA-ICC)Net calcification rate of calcium carbonate lightCommunity composition and diversityAlkalinity total standard deviationunique identificationTemperature waterCarbon inorganic dissolvedNet calcification rate of calcium carbonateCalculated using seacarb after Nisumaa et al 2010Color descriptionRespiration rate oxygenpHRespirationMonthCarbonate ionLaboratory experimentField experimentRespiration rateunique identification URIstandard deviationlightAcropora solitaryensisCalcification/DissolutionCalcite saturation statewaterPartial pressure of carbon dioxideSiteGrowth MorphologyRocky-shore communityAragonite saturation state standard deviationPorites heronensisCarbon inorganic dissolved standard deviationTypeCalculated using seacarb after Nisumaa et al. (2010)Primary production PhotosynthesisSpeciesBottles or small containers/Aquaria (&lt;20 L)fungiEvent labeltechnology industry and agricultureCarbonate system computation flagpH standard deviationbiochemical phenomena metabolism and nutritionFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonPartial pressure of carbon dioxide water at sea surface temperature wet airEntire communitySingle speciesCalcification DissolutionBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoralCoast and continental shelfPhotosynthetic efficiencySpecies unique identification (URI)darkIdentificationRegistration number of speciesSalinityTemperateBottles or small containers/Aquaria (<20 L)inorganicAlkalinityArea localityNet photosynthesis rate oxygenExperimentArea/localityAragonite saturation stateNorth PacificAlkalinity totalBottles or small containers Aquaria 20 LtotalCO2 ventCalcification rate of calcium carbonateTemperaturedissolvedPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Temperature water standard deviationNet photosynthesis rateEarth System ResearchNet calcification rate of calcium carbonate darkField observationgeographic locationsSpecies unique identificationBenthosCnidariaDiameterOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionGrowth ratePartial pressure of carbon dioxide standard deviationPrimary production/PhotosynthesisTreatmentCarbon dioxideGrowth/MorphologyRocky shore communityShootsoxygen
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Insights fromsodium into the impacts of elevated pCO2 and temperature on bivalve shell formation

2017

Ocean acidification and warming are predicted to affect the ability of marine bivalves to build their shells, but little is known about the underlying mechanisms. Shell formation is an extremely complex process requiring a detailed understanding of biomineralization processes. Sodium incorporation into the shells would increase if bivalves rely on the exchange of Na+/H+ to maintain homeostasis for shell formation, thereby shedding new light on the acid-base and ionic regulation at the calcifying front. Here, we investigated the combined effects of seawater pH (8.1, 7.7 and 7.4) and temperature (16 and 22 °C) on the growth and sodium composition of the shells of the blue mussel, Mytilus edul…

Ocean Acidification International Coordination Centre (OA-ICC)Registration number of speciesSalinityTemperateMytilus edulisinorganicAlkalinityGrowth rate standard deviationSodium/Calcium ratioExperimentPatinopecten yessoensisTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateNorth PacificAlkalinity totalSalinity standard errortotalSodium Calcium ratiopHTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorContainers and aquaria 20 1000 L or 1 m 2Earth System ResearchContainers and aquaria (20-1000 L or &lt; 1 m**2)standard deviationUniform resource locator link to referenceCalcification/DissolutionPotentiometric titrationCalcite saturation statewaterGrowth MorphologyContainers and aquaria (20-1000 L or < 1 m**2)Alkalinity total standard errorBenthosUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionTypeTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorGrowth rateCalculated using CO2SYSEvent labelCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaGrowth/MorphologySingle speciesCalcification DissolutionBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelf
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Sodium provides unique insights into transgenerational effects of ocean acidification on bivalve shell formation

2016

Ocean acidification is likely to have profound impacts on marine bivalves, especially on their early life stages. Therefore, it is imperative to know whether and to what extent bivalves will be able to acclimate or adapt to an acidifying ocean over multiple generations. Here, we show that reduced seawater pH projected for the end of this century (i.e., pH 7.7) led to a significant decrease of shell production of newly settled juvenile Manila clams, Ruditapes philippinarum. However, juveniles from parents exposed to low pH grew significantly faster than those from parents grown at ambient pH, exhibiting a rapid transgenerational acclimation to an acidic environment. The sodium composition of…

Ocean Acidification International Coordination Centre (OA-ICC)Registration number of speciesSalinityTemperateinorganicAlkalinitySodium/Calcium ratioExperimentTemperature waterCarbon inorganic dissolvedRuditapes philippinarumCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateNorth PacificAlkalinity totalSalinity standard errortotalSodium Calcium ratiopHTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedAcid base regulationCarbonate ionLaboratory experimentPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorContainers and aquaria 20 1000 L or 1 m 2Earth System ResearchContainers and aquaria (20-1000 L or &lt; 1 m**2)Uniform resource locator link to referenceCalcite saturation statewaterGrowth MorphologyContainers and aquaria (20-1000 L or < 1 m**2)Alkalinity total standard errorBenthosUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCAnimaliaBicarbonate ionTypeTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorGrowth rateCarbonate system computation flagAcid-base regulationFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentAragonite saturation state standard errorPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideSample IDMolluscaGrowth/MorphologySingle speciesBenthic animalsFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelf
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Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum

2018

Ocean acidification may interfere with the calcifying physiology of marine bivalves. Therefore, understanding their capacity for acclimation and adaption to low pH over multiple generations is crucial to make predictions about the fate of this economically and ecologically important fauna in an acidifying ocean. Transgenerational exposure to an acidification scenario projected by the end of the century (i.e., pH 7.7) has been shown to confer resilience to juvenile offspring of the Manila clam, Ruditapes philippinarum. However, whether, and to what extent, this resilience can persist into adulthood are unknown and the mechanisms driving transgenerational acclimation remain poorly understood.…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesCondition indexSalinityBicarbonate ion standard deviationinorganicAlkalinity total standard deviationAlkalinityCalculated using seacarb after Orr et al. (2018)Growth rate standard deviationFugacity of carbon dioxide in seawater standard deviationExperimentTemperature waterCarbon inorganic dissolvedRuditapes philippinarumCalculated using seacarb after Nisumaa et al 2010PercentageAragonite saturation stateNorth PacificAlkalinity totalδ13C dissolved inorganic carbon standard deviationtotalpHRespirationTemperaturedissolvedLaboratory experimentCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Carbon dioxide standard deviationTemperature water standard deviationContainers and aquaria 20 1000 L or 1 m 2δ13C dissolved inorganic carbonEarth System Researchδ13CContainers and aquaria (20-1000 L or &lt; 1 m**2)Metabolic rate of oxygen standard deviationstandard deviationUniform resource locator link to referenceCalcite saturation stateFugacity of carbon dioxide in seawaterwaterPartial pressure of carbon dioxideGrowth MorphologyContainers and aquaria (20-1000 L or < 1 m**2)Aragonite saturation state standard deviationBenthosUniform resource locator/link to referenceOther studied parameter or processSalinity standard deviationOcean Acidification International Coordination Centre OA ICCAnimaliaCarbon inorganic dissolved standard deviationCalcite saturation state standard deviationTypeBicarbonate ionCalculated using seacarb after Nisumaa et al. (2010)SpeciesGrowth rateCondition index standard deviationPartial pressure of carbon dioxide standard deviationMetabolic rate of oxygenCarbonate system computation flagpH standard deviationCarbonate ion standard deviationdissolved inorganic carbonCalculated using seacarb after Orr et al 2018Fugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaGrowth/MorphologySingle speciesFugacity of carbon dioxide water at sea surface temperature wet airBenthic animalsδ13C standard deviationCoast and continental shelf
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Seawater carbonate chemistry and somatic and otolith growth relationship of Symphodus ocellatus

2019

Ocean acidification (OA) may have varied effects on fish eco-physiological responses. Most OA studies have been carried out in laboratory conditions without considering the in situ pCO2/pH variability documented for many marine coastal ecosystems. Using a standard otolith ageing technique, we assessed how in situ ocean acidification (ambient, versus end-of-century CO2 levels) can affect somatic and otolith growth, and their relationship in a coastal fish. Somatic and otolith growth rates of juveniles of the ocellated wrasse Symphodus ocellatus living off a Mediterranean CO2 seep increased at the high-pCO2 site. Also, we detected that slower-growing individuals living at ambient pCO2 levels …

Ocean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesIdentificationSalinityinorganicAlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateChordataAlkalinity totaltotalCO2 ventTime in dayspHPelagosSymphodus ocellatusTemperaturedissolvedLength totalCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Temperature water standard deviationEarth System Researchstandard deviationField observationUniform resource locator link to referencePotentiometric titrationCalcite saturation stateLengthPotentiometricwaterPartial pressure of carbon dioxideSiteGrowth MorphologyAgeUniform resource locator/link to referenceSalinity standard deviationOcean Acidification International Coordination Centre OA ICCMediterranean SeaAnimaliaTypeSampling dateBicarbonate ionNektonCalculated using seacarb after Nisumaa et al. (2010)SpeciesCalculated using CO2SYSPartial pressure of carbon dioxide standard deviationCarbonate system computation flagpH standard deviationFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideGrowth/MorphologySingle speciesFugacity of carbon dioxide water at sea surface temperature wet airsense organs
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Seawater carbonate chemistry and percentage cover of macroalgal species at three locations at Vulcano, Italy

2017

Beneficial effects of CO2 on photosynthetic organisms will be a key driver of ecosystem change under ocean acidification. Predicting the responses of macroalgal species to ocean acidification is complex, but we demonstrate that the response of assemblages to elevated CO2 are correlated with inorganic carbon physiology. We assessed abundance patterns and a proxy for CO2:HCO3- use (delta 13C values) of macroalgae along a gradient of CO2 at a volcanic seep, and examined how shifts in species abundance at other Mediterranean seeps are related to macroalgal inorganic carbon physiology. Five macroalgal species capable of using both HCO3- and CO2 had greater CO2 use as concentrations increased. Th…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesSalinityCaulerpa proliferaCommunity composition and diversityBicarbonate ion standard deviationUdotea petiolatainorganicAlkalinity total standard deviationAlkalinitySargassum muticumDictyota dichotomaHalopteris scopariaYearsCystoseira brachycarpaExperimentTemperature waterCarbon inorganic dissolvedCystoseira foeniculaceaCaulerpa racemosaCalculated using seacarb after Nisumaa et al 2010Cystoseira foeniculataAragonite saturation stateAlkalinity totaltotalCO2 ventpHTemperaturedissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Acetabularia acetabulumJania rubensCarbon dioxide standard deviationEarth System Researchδ13CLipid contentstandard deviationField observationUniform resource locator link to referenceCystoseira crinitaCoverageCalcite saturation stateLocationwaterSiteRocky-shore communityFigureBenthosUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCMediterranean SeaCarbon inorganic dissolved standard deviationTypeBicarbonate ionDictyopteris polypodioidesDilophus fasciolaCalculated using seacarb after Nisumaa et al. (2010)SpeciesCystoseira compressaEvent labelCarbonate system computation flagpH standard deviationCarbonate ion standard deviationMassFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonOxygenPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideRocky shore communityEntire communityFugacity of carbon dioxide water at sea surface temperature wet airPadina pavonicaSeasonδ13C standard deviationCoast and continental shelfCodium bursaTableCystoseira barbarta
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Seawater carbonate chemistry and carbon sources of mussel shell carbonate

2018

Ocean acidification and warming is widely reported to affect the ability of marine bivalves to calcify, but little is known about the underlying mechanisms. In particular, the response of their calcifying fluid carbonate chemistry to changing seawater carbonate chemistry remains poorly understood. The present study deciphers sources of the dissolved inorganic carbon (DIC) in the calcifying fluid of the blue mussel (Mytilus edulis) reared at two pH (8.1 and 7.7) and temperature (16 and 22 °C) levels for five weeks. Stable carbon isotopic ratios of seawater DIC, mussel soft tissues and shells were measured to determine the relative contribution of seawater DIC and metabolically generated carb…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesSalinityMytilus edulisinorganicAlkalinityExperimentTemperature waterCarbon inorganic dissolvedhemic and lymphatic diseasesCalculated using seacarb after Nisumaa et al 2010PercentageAragonite saturation stateNorth Pacificδ13C dissolved inorganic carbon standard deviationAlkalinity totalSalinity standard errortotalpHTemperaturePartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedLaboratory experimentCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorContainers and aquaria 20 1000 L or 1 m 2δ13C dissolved inorganic carbonEarth System Researchδ13CContainers and aquaria (20-1000 L or &lt; 1 m**2)standard deviationUniform resource locator link to referencecirculatory and respiratory physiologyCalcite saturation statewaterContainers and aquaria (20-1000 L or < 1 m**2)BenthosAlkalinity total standard errorUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCAnimaliaTypeBicarbonate ionTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorCalcite saturation state standard errorCarbonate system computation flagdissolved inorganic carbonFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonBiomass/Abundance/Elemental compositionPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airBenthic animalsδ13C standard deviationBiomass Abundance Elemental compositionCoast and continental shelf
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Individual and population-level responses to ocean acidification

2016

Ocean acidification is predicted to have detrimental effects on many marine organisms and ecological processes. Despite growing evidence for direct impacts on specific species, few studies have simultaneously considered the effects of ocean acidification on individuals (e.g. consequences for energy budgets and resource partitioning) and population level demographic processes. Here we show that ocean acidification increases energetic demands on gastropods resulting in altered energy allocation, i.e. reduced shell size but increased body mass. When scaled up to the population level, long-term exposure to ocean acidification altered population demography, with evidence of a reduction in the pr…

Ocean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesSalinityinorganicBottles or small containers/Aquaria (<20 L)AlkalinityExperimentTemperature waterCarbon inorganic dissolvedCalculated using seacarb after Nisumaa et al 2010Aragonite saturation stateRespiration rate oxygenBottles or small containers Aquaria 20 LAlkalinity totalSalinity standard errortotalCO2 ventpHRespirationTemperaturedissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)Field experimentstandard errorCarbon inorganic dissolved standard errorRespiration rateEarth System ResearchSexUniform resource locator link to referencePotentiometric titrationCalcite saturation stateDry masswaterSiteHexaplex trunculusBenthosAlkalinity total standard errorUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCMediterranean SeaAnimaliaTypeBicarbonate ionTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciesWet massBottles or small containers/Aquaria (&lt;20 L)Calculated using CO2SYSCarbonate system computation flagFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonBiomass/Abundance/Elemental compositionTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airCarbon dioxideMolluscaSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airBenthic animalsBiomass Abundance Elemental compositionCoast and continental shelfoxygen
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A fully automated method for accurate measurement of geometrical distortion in magnetic resonance imaging of a 3D-lattice phantom

2019

Abstract This paper describes an automated method for extracting the apparent positions of fiducial points from 2D or 3D images of a phantom. We consider a 3D-lattice phantom for two main reasons: first, ease of manufacture and isotropy of its structure with respect to coordinate projections; second, a connected structure allowing to uniquely assess the adjacency relationship between fiducial points even if geometric distortions arising from main magnet inhomogeneity and gradient fields non-linearity is severe as observed in open-bore systems. In order to validate our proposed method and compare different choices for the parameters of our phantom (i.e. number and distance between grids and …

Offset (computer science)RegistrationImage qualityComputer scienceBiomedical EngineeringBiophysicsImage enhancement/restoration (noise and artifact reduction)Signal-To-Noise RatioImaging phantomPattern Recognition Automated030218 nuclear medicine & medical imaging03 medical and health sciencesImaging Three-Dimensional0302 clinical medicineSoftwareRobustness (computer science)HumansComputer SimulationRadiology Nuclear Medicine and imagingMagnetic resonance imaging (MRI)Fiducial point localizationElectronic Data ProcessingPhantoms ImagingSettore ING-INF/03 - Telecomunicazionibusiness.industryAirSpherical harmonicsModels TheoreticalMagnetic Resonance ImagingPhantom designPersonal computerAdjacency listbusinessAlgorithmSoftware030217 neurology & neurosurgeryMagnetic Resonance Imaging
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Impact of dietary intervention on serum neurofilament light chain in multiple sclerosis

2021

Background and ObjectivesAdapted ketogenic diet (AKD) and caloric restriction (CR) have been suggested as alternative therapeutic strategies for multiple sclerosis (MS), but information on their impact on neuroaxonal damage is lacking. Thus, we explored the impact of diets on serum neurofilament light chain (sNfL) levels in patients with relapsing-remitting MS.MethodsWe retrospectively evaluated a prospective randomized controlled trial of 60 patients with MS who were on a common diet or ketogenic diet or fasting. We examined sNfL levels of 40 participants at baseline and at the end of the study after 6 months using single molecule array assay.ResultssNfL levels were investigated in 9 contr…

OncologyAdultMalemedicine.medical_specialty2041medicine.medical_treatmentNeurofilament lightArticlelaw.inventionMultiple Sclerosis Relapsing-RemittingRandomized controlled triallawNeurofilament ProteinsInternal medicineOutcome Assessment Health CareMedicineHumansProspective StudiesTrial registrationSingle cycleCaloric RestrictionRetrospective Studiesbusiness.industryMultiple sclerosisFastingMiddle Agedmedicine.disease322Clinical trialNeurologyMultiple sclerosis functional compositeFemaleNeurology (clinical)businessDiet KetogenicFunction and Dysfunction of the Nervous SystemKetogenic diet
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