Search results for "Replica"

showing 10 items of 576 documents

Ocean acidification affects fish spawning but not paternity at CO2 seeps

2016

Fish exhibit impaired sensory function and altered behaviour at levels of ocean acidification expected to occur owing to anthropogenic carbon dioxide emissions during this century. We provide the first evidence of the effects of ocean acidification on reproductive behaviour of fish in the wild. Satellite and sneaker male ocellated wrasse (Symphodus ocellatus) compete to fertilize eggs guarded by dominant nesting males. Key mating behaviours such as dominant male courtship and nest defence did not differ between sites with ambient versus elevated CO2 concentrations. Dominant males did, however, experience significantly lower rates of pair spawning at elevated CO2 levels. Despite the higher r…

Eggs standard errorOcean Acidification International Coordination Centre (OA-ICC)TemperateRegistration number of speciesIdentificationSalinityEggsinorganicAlkalinityExperimentNumber standard errorDominant male paternityTemperature waterCarbon inorganic dissolvedNumber of individualsCalculated using seacarb after Nisumaa et al 2010Number of spawning events standard errorAragonite saturation stateFish standard lengthChordataAlkalinity totalSalinity standard errortotalCO2 ventReplicatesCourtship standard errorpHPelagosReproductionSymphodus ocellatusTemperatureNumberPartial pressure of carbon dioxide (water) at sea surface temperature (wet air) standard errordissolvedCarbonate ionPartial pressure of carbon dioxide (water) at sea surface temperature (wet air)standard errorIndividuals standard errorEarth System ResearchField observationFOS: Medical biotechnologyUniform resource locator link to referencePotentiometric titrationCalcite saturation stateLocationPotentiometricwaterNumber of spawning eventsAgeUniform resource locator/link to referenceOcean Acidification International Coordination Centre OA ICCMediterranean SeaAnimaliaEggs areaBehaviourTypeBicarbonate ionNektonEggs area standard errorTemperature water standard errorCalculated using seacarb after Nisumaa et al. (2010)SpeciespH standard errorWet massDominant male paternity standard errorCalculated using CO2SYSEvent labelIndividualsCourtshipCarbonate system computation flagstandard lengthFugacity of carbon dioxide (water) at sea surface temperature (wet air)CarbonTreatmentPartial pressure of carbon dioxide water at sea surface temperature wet airFishCarbon dioxideSingle speciesFugacity of carbon dioxide water at sea surface temperature wet airCoast and continental shelf
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2020

There is an active debate regarding whether the ego depletion effect is real. A recent preregistered experiment with the Stroop task as the depleting task and the antisaccade task as the outcome task found a medium-level effect size. In the current research, we conducted a preregistered multilab replication of that experiment. Data from 12 labs across the globe ( N = 1,775) revealed a small and significant ego depletion effect, d = 0.10. After excluding participants who might have responded randomly during the outcome task, the effect size increased to d = 0.16. By adding an informative, unbiased data point to the literature, our findings contribute to clarifying the existence, size, and g…

Ego depletionGeneralitySocial Psychologymedia_common.quotation_subject05 social sciences050109 social psychologySelf-controlbehavioral disciplines and activities050105 experimental psychologyTask (project management)Clinical PsychologyReplication (statistics)0501 psychology and cognitive sciencesPsychologyAntisaccade taskpsychological phenomena and processesStroop effectCognitive psychologymedia_commonSocial Psychological and Personality Science
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Let There be Variance: Individual Differences in Consecutive Self–Control in A Laboratory Setting and Daily Life

2019

The large body of research used to support ego–depletion effects is currently faced with conceptual and replication issues, leading to doubt over the extent or even existence of the ego–depletion effect. By using within–person designs in a laboratory (Study 1; 187 participants) and an ambulatory assessment study (Study 2; 125 participants), we sought to clarify this ambiguity by investigating whether prominent situational variables (such as motivation and affect) or personality traits can help elucidate when ego depletion can be observed and when not. Although only marginal ego–depletion effects were found in both studies, these effects varied considerably between individuals, indicating t…

Ego depletionSocial Psychologymedia_common.quotation_subjectReplication (statistics)Variance (accounting)Self-controlPsychologyDevelopmental psychologymedia_commonEuropean Journal of Personality
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A Multisite Preregistered Paradigmatic Test of the Ego-Depletion Effect

2021

We conducted a preregistered multilaboratory project ( k = 36; N = 3,531) to assess the size and robustness of ego-depletion effects using a novel replication method, termed the paradigmatic replication approach. Each laboratory implemented one of two procedures that was intended to manipulate self-control and tested performance on a subsequent measure of self-control. Confirmatory tests found a nonsignificant result ( d = 0.06). Confirmatory Bayesian meta-analyses using an informed-prior hypothesis (δ = 0.30, SD = 0.15) found that the data were 4 times more likely under the null than the alternative hypothesis. Hence, preregistered analyses did not find evidence for a depletion effect. Ex…

Ego depletionself-controlväsymysmedia_common.quotation_subjectAlternative hypothesispsykologiset teoriatBayesian probabilityopen data050109 social psychology050105 experimental psychologypreregisteredStatisticsReplication (statistics)/dk/atira/pure/core/keywords/600089002PsychologyHumans0501 psychology and cognitive sciencesGeneral Psychologymedia_commonEgoitsehallintabayesilainen menetelmä05 social sciencesNull (mathematics)Bayes TheoremSelf-controlSDG 10 - Reduced InequalitiesModerationopen materialsResearch Designpsykologiset testit/dk/atira/pure/sustainabledevelopmentgoals/reduced_inequalitiesTraitregistered replicationPsychologyego depletionPsychological Science
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Improvement in Nuclear Entry and Transgene Expression of Baculoviruses by Disintegration of Microtubules in Human Hepatocytes

2005

ABSTRACT Autographa californica multicapsid nucleopolyhedrovirus (AcMNPV), a potent virus for mammalian cell gene delivery, possesses an ability to transduce mammalian cells without viral replication. We examined the role of the cellular cytoskeleton in the cytoplasmic trafficking of viral particles toward the nucleus in human hepatic cells. Microscopic studies showed that capsids were found in the nucleus after either viral inoculation or cytoplasmic microinjection of nucleocapsids. The presence of microtubule (MT) depolymerizing agents caused the amount of nuclear capsids to increase. Overexpression of p50/dynamitin, an inhibitor of dynein-dependent endocytic trafficking from peripheral e…

EndosomeMicrotubule-associated proteinvirusesImmunologyEndocytic cycleGenetic VectorsActive Transport Cell NucleusGene ExpressionBiologyGene deliveryMicrobiologyMicrotubulesCell Linechemistry.chemical_compoundTransduction GeneticVirologyHumansNucleocapsidCytoskeletonDynactin Complexbeta-GalactosidaseMolecular biologyNucleopolyhedrovirusesRecombinant ProteinsVirus-Cell InteractionsNocodazoleMicroscopy ElectronViral replicationchemistryLac OperonCell cultureCytoplasmInsect ScienceHepatocytesMicrotubule-Associated Proteins
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Pathways of Cell Infection by Parvoviruses and Adeno-Associated Viruses

2004

Animal viruses have developed various strategies for infecting cells, and all begin with adsorption to cell surface receptors, penetration into the cytosol, uncoating or release of the viral genome, and targeting the genome and any required accessory proteins toward the correct cellular organelle or compartment for replication (26, 48, 63). Since genome delivery and release require the rearrangement of the viral structures, infection is normally a multistep process involving various viral and cellular components. Viruses that replicate in the nucleus must have mechanisms for transporting the genome and other components to the vicinity of the nuclear pore and into the nucleus (84). The endos…

EndosomevirusesImmunologyDependovirusBiologyMicrobiologyVirologyCell LineCell biologyParvoviridae InfectionsParvovirusMiceDogsViral envelopeViral replicationViral entryCytoplasmVirologyInsect ScienceAnimalsHumansMinireviewNuclear poreViral sheddingNuclear transportJournal of Virology
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A membrane-destabilizing peptide in capsid protein L2 is required for egress of papillomavirus genomes from endosomes

2005

ABSTRACT Papillomaviruses are internalized via clathrin-dependent endocytosis. However, the mechanism by which viral genomes pass endosomal membranes has not been elucidated. In this report we show that the minor capsid protein L2 is required for egress of viral genomes from endosomes but not for initial uptake and uncoating and that a 23-amino-acid peptide at the C terminus of L2 is necessary for this function. Pseudogenomes encapsidated by L1 and L2 lacking this peptide accumulated in vesicular compartments similar to that observed with L1-only viral particles, and these mutant pseudoviruses were noninfectious. This L2 peptide displayed strong membrane-disrupting activity, induced cytolys…

EndosomevirusesImmunologyMutantMolecular Sequence DataPeptideEndosomesGenome ViralBiologyEndocytosisVirus ReplicationMicrobiologyGreen fluorescent proteinCell LineVirologyAnimalsHumansAmino Acid SequencePapillomaviridaechemistry.chemical_classificationC-terminusStructure and AssemblyPapillomavirus InfectionsMolecular biologyCell biologyMembrane proteinchemistryCapsidInsect ScienceMutationCapsid Proteins
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Developing Passenger Car Equivalents for Freeways by Microsimulation

2015

Abstract In this paper a method of estimation of the passenger car equivalents for heavy vehicles on freeway is described. The variation in traffic quality was evaluated basing on a traffic demand characterized by different percentages of heavy vehicles. Aimsun micro-simulator was used to isolate traffic conditions difficult to capture on field, to replicate them to have a number of data as much as possible numerous, and to quantify the fundamental variables of traffic flow, namely the speed, flow, density, for a test freeway segment. Model calibration was accomplished by using traffic data collected at observation sections on the A22 Brenner Freeway, Italy. In order to check to what extent…

Engineeringheavy vehiclesbusiness.industryFlow (psychology)MicrosimulationmicrosimulationReplicateTraffic flowcalibrationAimsunAutomotive engineeringTransport engineeringTraffic conditionsfreewaysSettore ICAR/04 - Strade Ferrovie Ed Aeroportipassenger car equivalentsbusinessTransportation Research Procedia
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Replication of HSV-1 in murine peritoneal macrophages: comparison of various virus strains with different properties.

1984

The in vitro replication of eleven different strains of herpes simplex virus type 1 was studied in resident or thioglycollate-stimulated mouse macrophages. The strains of herpes simplex virus differed in the type of cytopathic effect, induction capacity for herpes simplex virus coded thymidine kinase and pathogenicity in the mouse. Herpes simplex virus replicated better in thioglycollate-stimulated macrophages than in resident macrophages. In vitro ageing of macrophages increased their replicative potency. Herpes simplex virus replicated better in macrophages from homozygous bg/bg C57/BL6J mice than in macrophages from their heterozygous littermates. Separation of macrophages on discontinuo…

ErythrocytesvirusesClone (cell biology)Mice Inbred StrainsBiologymedicine.disease_causeVirus ReplicationThymidine KinaseHerpesviridaeVirusMicrobiologychemistry.chemical_compoundMiceCytopathogenic Effect ViralPhagocytosisVirologymedicineMacrophageAnimalsAscitic FluidSimplexvirusCells CulturedCytopathic effectMacrophagesGeneral MedicineMacrophage ActivationVirologyMice Inbred C57BLHerpes simplex viruschemistryThymidine kinaseEnzyme InductionThymidineArchives of virology
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Why are viral genomes so fragile? The bottleneck hypothesis

2021

If they undergo new mutations at each replication cycle, why are RNA viral genomes so fragile, with most mutations being either strongly deleterious or lethal? Here we provide theoretical and numerical evidence for the hypothesis that genetic fragility is partly an evolutionary response to the multiple population bottlenecks experienced by viral populations at various stages of their life cycles. Modelling within-host viral populations as multi-type branching processes, we show that mutational fragility lowers the rate at which Muller’s ratchet clicks and increases the survival probability through multiple bottlenecks. In the context of a susceptible-exposed-infectious-recovered epidemiolog…

Evolutionary GeneticsRNA virusesMutation rateEpidemiologyExtinct GenomesMedicine and Health SciencesBiology (General)Genetics0303 health sciencesEvolutionary epidemiologyEcologyMicrobial MutationGenomicsDeletion MutationComputational Theory and MathematicsViral genomesGenetic EpidemiologyModeling and SimulationViral evolutionPopulation bottlenecksVirusesRNA ViralResearch ArticleQH301-705.5Genomics[SDV.CAN]Life Sciences [q-bio]/CancerContext (language use)Genome ViralBiologyMicrobiologyGenomic InstabilityViral EvolutionBottleneckEvolution Molecular03 medical and health sciencesCellular and Molecular NeuroscienceSurvival probabilityVirologyGeneticsFragilityMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyEvolutionary BiologyModels Genetic030306 microbiologyOrganismsComputational BiologyBiology and Life SciencesRNAVirus evolutionOrganismal EvolutionGenetic architecture[MATH.MATH-PR]Mathematics [math]/Probability [math.PR]Population bottleneckViral replicationMutationMicrobial Evolution
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