Search results for "Rom"

showing 10 items of 37506 documents

Human-associated migration of Holarctic Saccharomyces uvarum strains to Patagonia

2020

Our results show that the greatest S. uvarum population diversity worldwide is observed in Patagonia, where strains of this species can be isolated from industrial and traditional fermentations as well as from natural environments. This greater Patagonian diversity is due to the presence of strains belonging to two genetically differentiated populations, South America B (SA-B), and Holarctic/South America A (H/SA-A). The H/SA-A population of Patagonia is directly related to apple fermentation environments, mainly from cider fermentations but also, to a lesser extent, from traditional apple chicha. Our data suggest that strains from the Holarctic population colonized Patagonia. This is possi…

0106 biological sciencesPopulationBiodiversityZoologyApple treePlant ScienceBiology010603 evolutionary biology01 natural sciencesSaccharomyces uvarumDomesticationHolarcticPatagoniaColonizationDomesticationeducationEcology Evolution Behavior and SystematicsNatural habitat2. Zero hungerGenetic diversityeducation.field_of_studyEcologyEcological Modelingfungifood and beveragesBiodiversityDispersionequipment and suppliesFermentationbacteriaAdaptation010606 plant biology & botanyFungal Ecology
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Genetic analysis of organoleptic quality in fresh market tomato. 1. Mapping QTLs for physical and chemical traits

2001

Improving organoleptic quality is an important but complex goal for fresh market tomato breeders. A total of 26 traits involved in organoleptic quality variation were evaluated, in order to understand the genetic control of this characteristic. A recombinant inbred line (RIL) population was developed from an intraspecific cross between a cherry tomato line with a good overall aroma intensity and an inbred line with a common taste but with bigger fruits. Physical traits included fruit weight, diameter, color (L,a,b), firmness and elasticity. Chemical traits were dry matter weight, titratable acidity, pH, and the contents of soluble solids, sugars, lycopene, carotene and 12 aroma volatiles. R…

0106 biological sciencesPopulationOrganoleptic[SDV.GEN] Life Sciences [q-bio]/GeneticsQuantitative trait locus01 natural sciencesLycopersicon03 medical and health scienceschemistry.chemical_compoundCherry tomatoBotanyGeneticsDry mattereducationAromaComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hunger0303 health scienceseducation.field_of_study[SDV.GEN]Life Sciences [q-bio]/Geneticsbiologyfood and beveragesGeneral Medicinebiology.organism_classificationLycopeneHorticulturechemistryAgronomy and Crop Science010606 plant biology & botanyBiotechnology
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The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

2013

14 pages; International audience; In corals, biocalcification is a major function that may be drastically affected by ocean acidification (OA). Scleractinian corals grow by building up aragonitic exoskeletons that provide support and protection for soft tissues. Although this process has been extensively studied, the molecular basis of biocalcification is poorly understood. Notably lacking is a comprehensive catalog of the skeleton-occluded proteins-the skeletal organic matrix proteins (SOMPs) that are thought to regulate the mineral deposition. Using a combination of proteomics and transcriptomics, we report the first survey of such proteins in the staghorn coral Acropora millepora. The or…

0106 biological sciencesProteomeCoralMolecular Sequence Datacalcium carbonate skeletonProteomics010603 evolutionary biology01 natural sciencesMass SpectrometryCalcium CarbonateEvolution Molecular03 medical and health sciencesAcropora milleporaCalcification PhysiologicproteomicsPhylogeneticsAnthozoa[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionGeneticsAnimals14. Life underwaterAmino Acid Sequencescleractinian[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveriesPhylogeny030304 developmental biologyStaghorn coral0303 health sciencesbiologySequence Homology Amino AcidEcologyMolecular Sequence Annotationbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsAnthozoabiomineralizationExtracellular MatrixProtein Structure TertiaryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeSequence AlignmentFunction (biology)
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Proteomics as a way to identify extra-radicular fungal proteins from Glomus intraradices - RiT-DNA carrot root mycorrhizas

2004

To identify fungal proteins involved in the arbuscular mycorrhizal symbiosis, root-inducing transferred-DNA transformed roots of carrot (Daucus carota L.) were in vitro inoculated with Glomus intraradices. Proteins extracted from the extra-radical fungus were analysed by two-dimensional gel electrophoresis. A fungal reference map displaying 438 spots was set up. Four proteins, among the 14 selected for tandem mass spectrometry analysis, were identified including a NmrA-like protein, an oxido-reductase, a heat-shock protein and an ATP synthase beta mitochondrial precursor. The possible fungal origin of a MYK15-like protein found in mycorrhizal roots was further discussed. This is the first r…

0106 biological sciencesProteomeFungusProteomicsPlant Roots01 natural sciencesApplied Microbiology and BiotechnologyMicrobiologyMass SpectrometryMicrobiologyFungal Proteins03 medical and health sciencesSymbiosisMycorrhizaeElectrophoresis Gel Two-DimensionalMycorrhizaGlomeromycota[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUSGel electrophoresis0303 health sciencesFungal proteinEcologybiology030306 microbiologyfungibiology.organism_classificationDaucus carotaArbuscular mycorrhiza[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology010606 plant biology & botanyDaucus carota
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Plant proteome analysis

2004

Proteome analysis is becoming a powerful tool in the functional characterization of plants. Due to the availability of vast nucleotide sequence information and based on the progress achieved in sensitive and rapid protein identification by mass spectrometry, proteome approaches open up new perspectives to analyze the complex functions of model plants and crop species at different levels. In this review, an overview is given on proteome studies performed to analyze whole plants or specific tissues with particular emphasis on important physiological processes such as germination. The chapter on subcellular proteome analysis of plants focuses on the progress achieved for plastids and mitochond…

0106 biological sciencesProteomeGerminationComputational biologyBiologyProteomicsCrop species01 natural sciencesBiochemistryMass Spectrometry03 medical and health sciencesBotany[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyElectrophoresis Gel Two-Dimensional[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyPlastidSymbiosisMolecular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant Proteins2. Zero hungerTree physiology0303 health sciencesfungifood and beveragesPlantsProteomeProtein identification010606 plant biology & botany
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Impact of sewage sludges on Medicago truncatula symbiotic proteome

2004

The effects of sewage sludges were investigated on the symbiotic interactions between the model plant Medicago truncatula and the arbuscular mycorrhizal fungus Glomus mosseae or the rhizobial bacteria Sinorhizobium meliloti. By comparison to a control sludge showing positive effects on plant growth and root symbioses, sludges enriched with polycylic aromatic hydrocarbons or heavy metals were deleterious. Symbiosis-related proteins were detected and identified by two-dimensional electrophoresis and matrix-assisted laser desorption ionization mass spectrometry, and image analysis was used to study the effects of sewage sludges on M. truncatula symbiotic proteome.

0106 biological sciencesProteomeSewagePlant ScienceHorticulture01 natural sciencesBiochemistryPeptide Mapping12. Responsible consumption03 medical and health sciencesSymbiosisMycorrhizaeBotanyMedicagoElectrophoresis Gel Two-DimensionalMycorrhizaSymbiosisMolecular BiologyGlomusComputingMilieux_MISCELLANEOUS[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy030304 developmental biologyPlant Proteins0303 health sciencesSinorhizobium melilotibiologySewagebusiness.industryfungifood and beveragesGeneral MedicineHydrogen-Ion Concentrationbiology.organism_classification6. Clean waterMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationProteomebusinessSludge010606 plant biology & botanySinorhizobium meliloti
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Quantitative proteomics reveals a dynamic association of proteins to detergent-resistant membranes upon elicitor signaling in tobacco.

2009

International audience; A large body of evidence from the past decade supports the existence, in membrane from animal and yeast cells, of functional microdomains playing important roles in protein sorting, signal transduction, or infection by pathogens. In plants, as previously observed for animal microdomains, detergent-resistant fractions, enriched in sphingolipids and sterols, were isolated from plasma membrane. A characterization of their proteic content revealed their enrichment in proteins involved in signaling and response to biotic and abiotic stress and cell trafficking suggesting that these domains were likely to be involved in such physiological processes. In the present study, w…

0106 biological sciencesProteomicsGTPase-activating proteinQuantitative proteomicsDetergentsPlasma protein bindingBiologymedicine.disease_causeProteomics01 natural sciencesBiochemistryMass SpectrometryAnalytical ChemistryCell membraneFungal Proteins03 medical and health sciencesProtein targetingTobaccomedicine[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular Biology030304 developmental biologyPlant Proteins0303 health sciencesFungal proteinStaining and LabelingResearchAlgal ProteinsCell MembraneCell biologymedicine.anatomical_structureBiochemistryLuminescent MeasurementsSignal transductionPeptidesReactive Oxygen Species010606 plant biology & botanyProtein BindingSignal TransductionMolecularcellular proteomics : MCP
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A new ursane-type triterpene oxoglucopyranoside from Crossopteryx febrifuga.

2019

Abstract A new saponin, 3-O-β-d-3-oxo-glucopyranosyl-ursa-12,20(30)-diene-27,28-dioic acid (1), was isolated from the methanol extract of stem bark of Crossopteryx febrifuga together with the known 3β-d-glucopyranosyl-ursa-12,20(30)-diene-27,28-dioic acid (2), shanzhiside methyl ester (3), shanzhiside (4), β-sitosterol (5), β-sitosterol-3-O-β-d-glucopyranoside (6), ursa-12,20(30)-diene-27,28-dioic acid (7), hederagenin (8), and oleanolic acid (9). The structures were established by comprehensive interpretation of their spectral data 1D- (1H and 13C), 2D-NMR (1H-1H COSY, HMQC, HMBC), spectroscopic, and electrospray ionisation time-of-flight mass spectrometry analysis. The isolated compounds …

0106 biological sciencesProton Magnetic Resonance SpectroscopySaponinRubiaceaeMicrobial Sensitivity Testsmedicine.disease_cause01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEnterococcus faecalischemistry.chemical_compoundMinimum inhibitory concentrationTriterpeneGlucosidesmedicineCarbohydrate ConformationCarbon-13 Magnetic Resonance SpectroscopyOleanolic acidchemistry.chemical_classificationChromatographybiologyBacteriaChemistrybiology.organism_classificationTriterpenes0104 chemical sciences010404 medicinal & biomolecular chemistryHederageninStaphylococcus aureusAntibacterial activity010606 plant biology & botanyZeitschrift fur Naturforschung. C, Journal of biosciences
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Towards understanding isotope variability in elephant ivory to establish isotopic profiling and source-area determination

2016

Abstract We present here new isotopic data (δ 13 C, δ 15 N, δ 18 O, δ 2 H, and δ 34 S) from pulverised ivory powder, measured by continuous flow isotope ratio mass spectrometry from an unprecedented large dataset of 507 ivory samples, derived from twenty-eight African and six Asian elephant range states. The aim of this study is to assess the accuracy of isotopic fingerprinting and to evaluate its forensic potential and limitations to predict the provenance of ivory of unknown origin. We constructed a nominal assignment framework for the African reference samples, consisting of 208 different sites and applied the weighted k -Nearest Neighbor Classifier with reference site as classifier and …

0106 biological sciencesProvenance010504 meteorology & atmospheric sciencesbiologyEcologyStable isotope ratioIvoryNiche differentiationGeneralist and specialist species010603 evolutionary biology01 natural sciencesAfrican elephantGeographyAsian elephantvisual_artbiology.animalvisual_art.visual_art_mediumIsotope-ratio mass spectrometryEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesNature and Landscape ConservationBiological Conservation
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Purine auxotrophy: Possible applications beyond genetic marker

2019

Exploring new drug candidates or drug targets against many illnesses is necessary as "traditional" treatments lose their effectivity. Cancer and sicknesses caused by protozoan parasites are among these diseases. Cell purine metabolism is an important drug target. Theoretically, inhibiting purine metabolism could stop the proliferation of unwanted cells. Purine metabolism is similar across all eukaryotes. However, some medically important organisms or cell lines rely on their host purine metabolism. Protozoans causing malaria, leishmaniasis, or toxoplasmosis are purine auxotrophs. Some cancer forms have also lost the ability to synthesize purines de novo. Budding yeast can serve as an effect…

0106 biological sciencesPurineAuxotrophySaccharomyces cerevisiaeBioengineeringSaccharomyces cerevisiaeBiology01 natural sciencesApplied Microbiology and BiotechnologyBiochemistry03 medical and health scienceschemistry.chemical_compoundDrug DevelopmentNeoplasms010608 biotechnologyGeneticsHumansPurine metabolism030304 developmental biology0303 health sciencesAdenineEukaryotaCell Cycle CheckpointsMetabolismCell cyclebiology.organism_classificationYeastchemistryBiochemistryPurinesCancer cellBiotechnologyYeast
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