Search results for "Rope"

showing 10 items of 10402 documents

A simple method to estimate the isoelectric point of modified Tomato bushy stunt virus (TBSV) particles

2017

We present a simple method to estimate the isoelectric point (pI) of Tomato Bushy Stunt particles. We demonstrate that the combination of agarose gels with different pH buffers can be used to electrophorese the virus particles and their migration patterns can be compared. This method allows us to estimate the pI of the virus particles (wild type, wt, and genetically modified particles) and to monitor the effect of the pI of modified peptide side chains of the viral capsid subunit on the pI of the whole virus particle.

0301 basic medicineTombusvirusSurface PropertiesvirusesClinical BiochemistryBuffersBiologyBiochemistryVirusAnalytical ChemistryDiffusionTombusvirus03 medical and health sciencesIsoelectric PointElectrophoresis Agar GelIsoelectric focusingVirionfood and beveragesHydrogen-Ion Concentrationbiology.organism_classificationMolecular biologyElectrophoresis030104 developmental biologyIsoelectric pointCapsidBiophysicsParticleCapsid ProteinsPeptidesTomato bushy stunt virusELECTROPHORESIS
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Multicenter validation study for the certification of a CFTR gene scanning method using next generation sequencing technology.

2018

AbstractBackground:Many European laboratories offer molecular genetic analysis of theCFTRgene using a wide range of methods to identify mutations causative of cystic fibrosis (CF) and CFTR-related disorders (CFTR-RDs). Next-generation sequencing (NGS) strategies are widely used in diagnostic practice, and CE marking is now required for most in vitro diagnostic (IVD) tests in Europe. The aim of this multicenter study, which involved three European laboratories specialized in CF molecular analysis, was to evaluate the performance of Multiplicom’s CFTR MASTR Dx kit to obtain CE-IVD certification.Methods:A total of 164 samples, previously analyzed with well-established “reference” methods for t…

0301 basic medicineValidation studycongenital hereditary and neonatal diseases and abnormalitiesCertification[SDV]Life Sciences [q-bio]Clinical BiochemistrySequencing dataCFTR molecular diagnosiCystic Fibrosis Transmembrane Conductance RegulatorComputational biology030105 genetics & heredityBiologyCFTR molecular diagnosisDNA sequencingIn vitro diagnosticCftr genecystic fibrosis03 medical and health sciencesHumanscystic fibrosiCE-IVD certificationBiochemistry (medical)Reproducibility of ResultsIllumina miseqSequence Analysis DNAGeneral MedicineMolecular analysisEurope030104 developmental biologyMulticenter studycomparative sequencing analysicomparative sequencing analysisMutationnext-generation sequencingMultiplex Polymerase Chain Reaction
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Seroprevalence of Toxoplasma gondii in domestic pigs, sheep, cattle, wild boars, and moose in the Nordic-Baltic region: A systematic review and meta-…

2019

Background: Toxoplasma gondii is an important foodborne zoonotic parasite. Meat of infected animals is presumed to constitute a major source of human infection and may be a driver of geographical variation in the prevalence of anti-T. gondii antibodies in humans, which is substantial in the Nordic-Baltic region in northern Europe. However, data on seroprevalence of T. gondii in different animal species used for human consumption are scattered. Methods: We conducted a systematic review of seroprevalence studies and meta-analysis to estimate the seroprevalence of T. gondii in five animal species that are raised or hunted for human consumption in the Nordic-Baltic region: domestic pigs (Sus sc…

0301 basic medicineVeterinary medicineEpidemiology030231 tropical medicineved/biology.organism_classification_rank.speciesFood-borneBiologyArticleSerologylcsh:Infectious and parasitic diseases03 medical and health sciencesZoonosis0302 clinical medicinemedicineSeroprevalencelcsh:RC109-216OvisSeroepidemiology2. Zero hungerved/biologyTaurine cattleZoonosisToxoplasma gondii030108 mycology & parasitologymedicine.diseasebiology.organism_classificationToxoplasmosis3. Good healthEuropeDomestic pigInfectious DiseasesParasitologyMeat-borneToxoplasmosis
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Hepatitis E virus in lettuce and water samples: A method-comparison study

2017

The hepatitis E virus (HEV), which is an increasing cause of acute viral hepatitis in Europe, is a zoonotic virus that is mainly transmitted through contaminated water, consumption of raw or undercooked meat from pigs or wild boar, blood transfusion, and organ transplantation. Although the role of HEV transmission through contaminated produce has not been confirmed, the presence of HEV has been reported in irrigation waters and in vegetables. The present study used a World Health Organization (WHO) international standard and clinical samples to evaluate the performance characteristics of three RT-qPCR assays for detection and quantification of HEV. Two of the evaluated assays provided good …

0301 basic medicineVeterinary medicineIrrigationMeatSwine030106 microbiologySewageReal-Time Polymerase Chain Reactionmedicine.disease_causeMicrobiology03 medical and health sciencesWild boarHepatitis E virusSpinacia oleraceabiology.animalPepperVegetablesHepatitis E virusmedicineAnimalsHumansDetection limitbiologySewagebusiness.industryWater PollutionRT-qPCRGeneral MedicineLettuceContaminationIrrigation watermedicine.diseaseHepatitis EEuropeHEVRNA ViralCapsicumViral hepatitisbusinessFoodborne virusFood Science
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Vitamin D3 affects innate immune status of European sea bass (Dicentrarchus labrax L.)

2017

The effects of vitamin D3 dietary administration on certain innate immune parameters on the expression of immune-related genes in head-kidney (HK) and gut were investigated in European sea bass Dicentrarchus labrax. Vitamin D3 (vD3) was orally administered to fish in a commercial pellet food supplemented with 0 (control); 3750; 18,750; or 37,500 U kg−1. Furthermore, gut histology was considered. This study showed a modulation in the activities examined in fish fed with the addition of vD3. After just 2 weeks of administration, diet supplementation with the vitamin resulted in increased phagocytic ability, while serum peroxidase content was increased in fish fed with all experimental diets a…

0301 basic medicineVitaminmedicine.medical_specialtyfood.ingredient3PhysiologyTeleostFish farmingAquatic ScienceBiochemistry)03 medical and health scienceschemistry.chemical_compoundBass (fish)foodAquacultureInternal medicinemedicineSea bassInnate immunityInnate immune systembiologybusiness.industryGeneral Medicinebiology.organism_classificationEuropean sea bass (Dicentrarchus labrax L.)030104 developmental biologyEndocrinologychemistryImmunologyDicentrarchusCholecalciferolbusinessCholecalciferol (vitamin DFish Physiology and Biochemistry
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Primjena ekstrakta proteina sirutke u proizvodnji smrznutog mliječnog deserta

2018

The aim of this work was to substantiate the use of whey protein extract (WPE), a by-product of dairy industry, combined with different berry purees in the formulation of a whipped frozen dairy dessert (WFDD). After freezing, the swelling ability of WPE decreased significantly while at higher temperatures of the dispersion medium, the degree of swelling increased. A mixture containing 55±2 % WPE and 45±2 % milk presented a homogeneous consistency while the further processing did not improve the structure of the mixture. Final formulations of WFDD containing different berry purees (i.e. 10 % black¬currant puree, 25 % cherry puree, or 30 % strawberry puree) were proposed for which the nutriti…

0301 basic medicineWhey protein030109 nutrition & dieteticsbusiness.industryChemistryorganoleptic propertiesswelling degreeOrganolepticekstrakt proteina sirutke; smrznuti mliječni desert; pire bobičastog voća; organoleptička svojstva; stupanj bubrenjaFood composition datalcsh:SF221-250whey protein extract; whipped frozen dairy dessert; berry puree; organoleptic properties; swelling degreewhey protein extract ; whipped frozen dairy dessert ; berry puree ; organoleptic properties ; swelling degreeberry puree03 medical and health scienceslcsh:DairyingMilk productsFood processingFood scienceFood qualitybusinesswhipped frozen dairy dessertwhey protein extractMljekarstvo
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Phase separations induced by a trapping potential in one-dimensional fermionic systems as a source of core-shell structures

2018

Ultracold fermionic gases in optical lattices give a great opportunity for creating different types of novel states. One of them is phase separation induced by a trapping potential between different types of superfluid phases. The core-shell structures, occurring in systems with a trapping potential, are a good example of such separations. The types and the sequences of phases which emerge in such structures can depend on spin-imbalance, shape of the trap and on-site interaction strength. In this work, we investigate the properties of such structures within an attractive Fermi gas loaded in the optical lattice, in the presence of the trapping potential and their relations to the phase diagr…

0301 basic medicineWork (thermodynamics)lcsh:MedicineFOS: Physical sciencesTrappingMolecular physicsArticleSuperconducting properties and materialsTrap (computing)Superfluidity03 medical and health sciences0302 clinical medicinePhase (matter)lcsh:ScienceUltracold gasesPhase diagramPhysicsCondensed Matter::Quantum GasesOptical latticeMultidisciplinarylcsh:R030104 developmental biologyQuantum Gases (cond-mat.quant-gas)lcsh:QCondensed Matter - Quantum GasesFermi gas030217 neurology & neurosurgery
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A systems-wide understanding of photosynthetic acclimation in algae and higher plants

2017

The ability of phototrophs to colonise different environments relies on robust protection against oxidative stress, a critical requirement for the successful evolutionary transition from water to land. Photosynthetic organisms have developed numerous strategies to adapt their photosynthetic apparatus to changing light conditions in order to optimise their photosynthetic yield, which is crucial for life on Earth to exist. Photosynthetic acclimation is an excellent example of the complexity of biological systems, where highly diverse processes, ranging from electron excitation over protein protonation to enzymatic processes coupling ion gradients with biosynthetic activity, interact on drasti…

0301 basic medicine[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyAcclimatizationContext (language use)PhD traininginterdisciplinary trainingPlant Science: Biochemistry biophysics & molecular biology [F05] [Life sciences]BiologyacclimationPhotosynthesisAcclimatizationModels Biologicalmodelling03 medical and health sciencesAlgaeChlorophytaapplication industrielle[SDV.BV]Life Sciences [q-bio]/Vegetal Biologymathematical modellingPhotosynthesis: Biochimie biophysique & biologie moléculaire [F05] [Sciences du vivant]biodiversitymodélisationmicro-alguePhototrophphotosynthetic systemEcologyNon-photochemical quenchingSystems Biologyacclimatation photosynthétiquephotosynthetic optimisationPlanktonPlantsanalyse rétrospectivebiology.organism_classificationindustrial applicationEuropean Training Network030104 developmental biologyAcclimation; European Training Network; PhD training; biodiversity; interdisciplinary training; mathematical modelling; microalgal cultivation; non-photochemical quenching; photosynthetic optimisationPhotosynthetic acclimationadaptation à la lumièremicroalgal cultivationappareil photosynthétiqueBiochemical engineeringnon-photochemical quenching
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Engineering of Human Skeletal Muscle With an Autologous Deposited Extracellular Matrix

2018

Adult skeletal muscle progenitor cells can be embedded in an extracellular matrix (ECM) and tissue-engineered to form bio-artificial muscles (BAMs), composed of aligned post-mitotic myofibers. The ECM proteins which have been used most commonly are collagen type I and fibrin. Fibrin allows for in vitro vasculogenesis, however, high concentrations of fibrinolysis inhibitors are needed to inhibit degradation of the ECM and subsequent loss of BAM tissue structure. For in vivo implantation, fibrinolysis inhibition may prove difficult or even harmful to the host. Therefore, we adapted in vitro culture conditions to enhance the deposition of de novo synthesized collagen type I gradually replacing…

0301 basic medicinecollagenPhysiologyextracellular matrix02 engineering and technologyFibrinlcsh:PhysiologyExtracellular matrix03 medical and health sciencesHydroxyprolinechemistry.chemical_compoundTissue cultureVasculogenesisTissue engineeringPhysiology (medical)medicinefibrinskeletal muscleOriginal Researchbiologylcsh:QP1-981ChemistrySkeletal muscleviscoelastic propertiesfood and beveragesAnatomy021001 nanoscience & nanotechnologyAscorbic acidCell biology030104 developmental biologymedicine.anatomical_structuretissue engineeringbiology.protein0210 nano-technology
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Mortality in COVID-19 disease patients: Correlating Association of Major histocompatibility complex (MHC) with severe acute respiratory syndrome 2 (S…

2020

Highlights • In addition to ethnicity, socio-economic factors, prior vaccinations and exposure to other coronaviruses, other factors need to be considered to explain geographical and regional variations in susceptibility, severity of clinical expression of COVID-19 disease and outcomes. • Differences in peptide binding of SARS-CoV-2 variants to MHC class II, but not to MHC class I alleles frequent in individuals with African, Asian or Caucasian descent could be identified. • Single mutations in the wildtype of SARS-CoV-2, the so called B strain or L strain impact on MHC presentation • Most likely there is selective pressure from MHC class II alleles in regard to binding of the ORF8 (L84S) v…

0301 basic medicinecross-reactivityMHC bindingPeptide bindingmedicine.disease_causeAutoimmunity0302 clinical medicine030212 general & internal medicineMutationepitopeautoimmunityGeneral MedicineHLAEuropeviral variantsInfectious DiseasesCoronavirus InfectionsPeptides ; COVID-19 ; Disease association ; Cross-reactivity ; MHC ; T-cells ; Autoimmunity ; Epitope ; Cytokines ; Viral variants ; HLA ; SARS ; SARS-CoV-2 ; MHC bindingMicrobiology (medical)Asia030106 microbiologyPneumonia ViralHuman leukocyte antigenBiologyMajor histocompatibility complexArticlelcsh:Infectious and parasitic diseases03 medical and health sciencesBetacoronavirusMHC class ImedicineHumanslcsh:RC109-216AllelePandemicsAllelesSARSMHC class IISARS-CoV-2T-cellsdisease associationHistocompatibility Antigens Class IHistocompatibility Antigens Class IICOVID-19cytokinesImmunologyAfricabiology.proteinpeptidesMHCInternational Journal of Infectious Diseases
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