Search results for "SCAN"

showing 10 items of 2467 documents

Effects of cooking on mollusk shell structure and chemistry: Implications for archeology and paleoenvironmental reconstruction

2016

Mollusk shells excavated from archeological sites have been used to reconstruct paleoenvironment, human foraging, and migratory patterns. To retrieve information on past environment or human behavior, chemical signatures such as oxygen stable isotopes (δ18Oshell) are analyzed. Shell archeological remains usually represent food waste. Thermal treatments such as boiling and roasting may influence shell structure and biochemical composition. However, little is known about the relationship between changes at macro-, microstructural and chemical levels. This work is a calibration study on modern Phorcus (Osilinus) turbinatus shells. A simulation of two different cooking methods (boiling and roas…

010506 paleontologyArcheologybiologyStable isotope ratioScanning electron microscopechemistry.chemical_elementMineralogy010502 geochemistry & geophysicsbiology.organism_classification01 natural sciencesArchaeologyOxygenIridescencesymbols.namesakechemistryPhorcusBoilingsymbolsRaman spectroscopy0105 earth and related environmental sciencesRoastingJournal of Archaeological Science: Reports
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Causes and consequences of past and projected Scandinavian summer temperatures, 500-2100 AD

2011

Tree rings dominate millennium-long temperature reconstructions and many records originate from Scandinavia, an area for which the relative roles of external forcing and internal variation on climatic changes are, however, not yet fully understood. Here we compile 1,179 series of maximum latewood density measurements from 25 conifer sites in northern Scandinavia, establish a suite of 36 subset chronologies, and analyse their climate signal. A new reconstruction for the 1483–2006 period correlates at 0.80 with June–August temperatures back to 1860. Summer cooling during the early 17th century and peak warming in the 1930s translate into a decadal amplitude of 2.9°C, which agrees with existin…

010506 paleontologyAtmospheric Science010504 meteorology & atmospheric sciencesAtmospheric circulationClimate ChangeClimate changelcsh:MedicineForcing (mathematics)Scandinavian and Nordic Countries01 natural sciencesAtmospheric CirculationBiospherePaleoclimatologyEnvironmental GeographyAtmospheric DynamicsPaleoclimatologylcsh:Science0105 earth and related environmental sciencesClimatologySeries (stratigraphy)MultidisciplinaryGeographyAtmospherelcsh:RTemperature/dk/atira/pure/core/subjects/geography15. Life on landSea surface temperatureGeographyPhysical Geography13. Climate actionClimate RecordClimatologyPeriod (geology)Earth SciencesClimate modellcsh:QSeasonsEnvironmental SciencesResearch ArticleClimate ModelingPLOS One
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A little walk between Early Jurassic sponges and corals: a confusing morphological convergence.

2019

24 pages; International audience; Hispaniastraea Turnšek et Geyer, 1975 is a unique coral genus from the Early Jurassic Epoch (Liassic). Corals of this genus are characterised by a highly dominant major septum and a set of eleven minor septa that are very short or even abortive. Initially discovered in Spain, new samples of this genus were depicted from Morocco by Beauvais in 1980; however, this genus was interpreted as a synonym of Pseudoseptifer Fischer, 1970, a chaetetid sponge (i.e., a sponge with siliceous spicules embedded in a calcareous skeleton). The skeleton of Pseudoseptifer is composed of adjacent tubules that increase by fissiparity by means of a pseudoseptum. Based on the stud…

010506 paleontologySynonymPhylumEvolutionary convergenceCoralChaetetidsPaleontologyCT-scanBiology010502 geochemistry & geophysicsbiology.organism_classification01 natural sciencesHexanthiniariaLiassicPaleontologySpongeSponge spiculeSpace and Planetary ScienceGenusddc:550Key (lock)14. Life underwater[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental sciencesTaxonomy
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Biochemical characterization of the skeletal matrix of the massive coral, Porites australiensis - The saccharide moieties and their localization.

2018

11 pages; International audience; To construct calcium carbonate skeletons of sophisticated architecture, scleractinian corals secrete an extracellular skeletal organic matrix (SOM) from aboral ectodermal cells. The SOM, which is composed of proteins, saccharides, and lipids, performs functions critical for skeleton formation. Even though polysaccharides constitute the major component of the SOM, its contribution to coral skeleton formation is poorly understood. To this end, we analyzed the SOM of the massive colonial coral, Porites australiensis, the skeleton of which has drawn great research interest because it records environmental conditions throughout the life of the colony. The coral …

0106 biological sciences0301 basic medicineBiomineralizationGlycanCoralMatrix (biology)Polysaccharide010603 evolutionary biology01 natural sciencesCalcium Carbonate03 medical and health sciencesCalcification PhysiologicSaccharideStructural BiologyMonosaccharideAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsSkeletonchemistry.chemical_classificationbiologySkeletal organic matrixLectinProteinsAnthozoaSkeleton (computer programming)Porites australiensisExtracellular Matrix030104 developmental biologyBiochemistrychemistrybiology.proteinMicroscopy Electron ScanningCoralCrystallizationBiomineralization
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Gibberellin reactivates and maintains ovary-wall cell division causing fruit set in parthenocarpic Citrus species

2016

[EN] Citrus is a wide genus in which most of the cultivated species and cultivars are natural parthenocarpic mutants or hybrids (i.e. orange, mandarin, tangerine, grapefruit). The autonomous increase in GA(1) ovary concentration during anthesis was suggested as being the stimulus responsible for parthenocarpy in Citrus regardless of the species. To determine the exact GA-role in parthenocarpic fruit set, the following hypothesis was tested: GA triggers and maintains cell division in ovary walls causing fruit set. Obligate and facultative parthenocarpic Citrus species were used as a model system because obligate parthenocarpic Citrus sp (i.e. Citrus unshiu) have higher GA levels and better n…

0106 biological sciences0301 basic medicineCitrusCell divisionFruit setCitruFlowersPlant ScienceOrange (colour)BiologyParthenocarpy01 natural sciencesPaclobutrazol03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsGeneticAnthesisCell WallGene Expression Regulation PlantBotanyPRODUCCION VEGETALGeneticsGibberellinPhylogenyFruit treePlant Growth Regulatorfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationGibberellinsUp-RegulationCitrus unshiu030104 developmental biologychemistryFlowerFruitMicroscopy Electron ScanningParthenocarpyGibberellinAgronomy and Crop ScienceCell DivisionFruit tree010606 plant biology & botanyPlant Science
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Northern European Salmo trutta (L.) populations are genetically divergent across geographical regions and environmental gradients

2020

The salmonid fish Brown trout is iconic as a model for the application of conservation genetics to understand and manage local interspecific variation. However, there is still scant information about relationships between local and large-scale population structure, and to what extent geographical and environmental variables are associated with barriers to gene flow. We used information from 3,782 mapped SNPs developed for the present study and conducted outlier tests and gene–environment association (GEA) analyses in order to examine drivers of population structure. Analyses comprised >2,600 fish from 72 riverine populations spanning a central part of the species' distribution in norther…

0106 biological sciences0301 basic medicineConservation geneticsSELECTIONPopulationsalmonidCONSERVATIONlcsh:Evolutiongenotype‐environment association010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesbrown troutLOCAL ADAPTATIONSampling designlcsh:QH359-425GeneticsGENOME SCANS14. Life underwaterSalmoeducationEcology Evolution Behavior and SystematicsLocal adaptationGenotype‐environment associationeducation.field_of_studyCLIMATE-CHANGEbiologyBROWN TROUTSTRUCTURED POPULATIONSR-PACKAGESampling (statistics)genotype-environment associationVDP::Matematikk og Naturvitenskap: 400biology.organism_classification030104 developmental biologyEvolutionary biologyoutlier testTEMPORAL-CHANGESOutlierGeneral Agricultural and Biological SciencesASCERTAINMENT BIASlocal adaptation
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From the roots to the stem: unveiling pear root colonization and infection pathways by Erwinia amylovora

2020

ABSTRACT Fire blight caused by Erwinia amylovora affects pome fruit worldwide, generating serious economic losses. Despite the abundant literature on E. amylovora infection mechanisms of aerial plant organs, root infection routes remain virtually unexplored. Assessing these infection pathways is necessary for a full understanding of the pathogen's ecology. Using the pathosystem Pyrus communis–E. amylovora and different experimental approaches including a green fluorescent protein transformant (GFP1) and epifluorescence microscopy (EFM) and laser confocal scanning microscopy (LCSM), we demonstrated the pathogen's ability to infect, colonize and invade pear roots and cause characteristic fire…

0106 biological sciences0301 basic medicineErwiniaConfocal scanning microscopy01 natural sciencesApplied Microbiology and BiotechnologyMicrobiologyPyrus03 medical and health sciencesPathosystemBotanyErwinia amylovoraPlant DiseasesPEAREcologybiologyfungiLateral rootfood and beveragesXylembiology.organism_classification030104 developmental biologyFruitMalusFire blight010606 plant biology & botanyPyrus communisFEMS Microbiology Ecology
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The exceptionality of stress response in Magnaporthe oryzae: a set of “salt stress-induced” genes unique to the rice blast fungus

2017

The ability of pathogens to signal perception and adaptation to environmental changes is an important prerequisite for successful colonization of the host organism. Filamentous phytopathogenic fungi, for example, have to cope with rapid changes in the environment during invasive growth in planta. Consequently, they have evolved a range of specific factors contributing to environmental adaptation facilitating host invasion. In addition to conserved pathways, including genes participating in stress response, unique/individual genes within the pathogens might represent determinants of pathogenicity. Therefore, identification of unique genes could provide a set of excellent candidates for novel…

0106 biological sciences0301 basic medicineGeneticsOsmotic shockPlant physiologyFungusPlant ScienceBiologyHorticulturebiology.organism_classification01 natural sciencesYeast03 medical and health sciences030104 developmental biologyOsmolyteBotanyOsmoregulationGeneAgronomy and Crop Science010606 plant biology & botanyInterProScanJournal of Plant Diseases and Protection
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Structural and transcriptional evidence of mechanotransduction in the Drosophila suzukii ovipositor

2020

Drosophila suzukii is an invasive pest that prefers to lay eggs in ripening fruits, whereas most closely related Drosophila species exclusively use rotten fruit as oviposition site. This behaviour is allowed by an enlarged and serrated ovipositor that can pierce intact fruit skin, and by multiple contact sensory systems (mechanosensation and taste) that detect the optimal egg-laying substrates. Here, we tested the hypothesis that bristles present in the D. suzukii ovipositor tip contribute to these sensory modalities. Analysis of the bristle ultrastructure revealed that four different types of cuticular elements (conical pegs type 1 and 2, chaetic and trichoid sensilla) are present on the t…

0106 biological sciences0301 basic medicineMechanotransductionPhysiologyOvipositionSensory receptorBristleMechanotransduction CellularElectron01 natural sciences03 medical and health sciencesMicroscopy Electron TransmissionSpecies Specificitycomparative RNA-seqMelanogasterAnimalsTransmissionScanningSensillaDrosophila suzukiiDrosophilaMicroscopybiologyMechanosensationfungiTaste Perceptionbiology.organism_classificationultrastructureCell biology010602 entomology030104 developmental biologySettore AGR/11 - ENTOMOLOGIA GENERALE E APPLICATAmechanosensitive bristlesInsect ScienceMicroscopy Electron ScanningOvipositorspotted wing drosophilaDrosophilaFemaleMechanosensitive channelsCellularJournal of Insect Physiology
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The Nonbilayer Lipid MGDG and the Major Light-Harvesting Complex (LHCII) Promote Membrane Stacking in Supported Lipid Bilayers.

2018

The thylakoid membrane of algae and land plants is characterized by its intricate architecture, comprising tightly appressed membrane stacks termed grana. The contributions of individual components to grana stack formation are not yet fully elucidated. As an in vitro model, we use supported lipid bilayers made of thylakoid lipid mixtures to study the effect of major light-harvesting complex (LHCII), different lipids, and ions on membrane stacking, seen as elevated structures forming on top of the planar membrane surface in the presence of LHCII protein. These structures were examined by confocal laser scanning microscopy, atomic force microscopy, and fluorescence recovery after photobleachi…

0106 biological sciences0301 basic medicineMicroscopy ConfocalChemistryLipid BilayersStackingLight-Harvesting Protein ComplexesPeasfood and beveragesFluorescence recovery after photobleachingMicroscopy Atomic Force01 natural sciencesBiochemistryLight-harvesting complexDiglycerides03 medical and health sciences030104 developmental biologyGlycolipidMembraneThylakoidConfocal laser scanning microscopyBiophysicslipids (amino acids peptides and proteins)Lipid bilayer010606 plant biology & botanyBiochemistry
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