Search results for "SD"

showing 10 items of 20459 documents

New national and regional bryophyte records, 48

2016

Andreaea rothii has been recorded for the first time in Croatia. It is a boreo-temperate suboceanic species (Hill et al., 2007) relatively rare in SE Europe, since it is known only from Romania (Ellis et al., 2014d), Slovenia and Serbia (Sabovljevic´ et al., 2008 ; Hodgetts, 2015). The species was found in the Papuk Mountains, situated in the mainly lowland area of NE Croatia. In this region Papuk is the largest and highest mountain range, with peaks between 800 and 900 m a.s.l. They are characterized by high geological diversity dominated by metamorphic rocks, such as different types of schists, as well as granites. The climate is temperate, moderately warm without an explicit dry period. …

0106 biological sciences0301 basic medicineDicranum scopariumAntarctic Iles-KerguelenPopulationSouth-Shetland-islandsPlant Science01 natural sciencesAndreaea rothii F.Weber & D.Mohr subsp. rothii03 medical and health sciencesFagus sylvaticaBotanyScreeeducationBeechComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics[SDV.EE]Life Sciences [q-bio]/Ecology environmenteducation.field_of_studyannotated checklistbiologygrimmiaceae15. Life on land030108 mycology & parasitologybiology.organism_classificationMosstaxonomic revisionmoss genusGeographyheard IslandQuercus petraeaBryophytesp-novNew-Zealandred-list010606 plant biology & botanyJournal of Bryology
researchProduct

Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

2017

Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute…

0106 biological sciences0301 basic medicineEPIGENOMIC DIVERSITY[SDV]Life Sciences [q-bio]Species distributionINDIVIDUAL VARIATIONPhenotypic plasticity01 natural sciencesGenomephenotypic plasticityEpigenesis GeneticDNA METHYLATION VARIATIONComputingMilieux_MISCELLANEOUS0303 health sciencesEcologyEcologybioinformatiikkagenomiikkaGenomicsPlantsBioinformatics; ecological epigenetics; genomics; phenotypic plasticity; response to environment; Ecology Evolution Behavior and Systematics[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]HabitatepigenetiikkainternationalPHYSCOMITRELLA-PATENSresponse to environmentPERENNIAL HERBkasviekologiaEcological epigeneticsSEQUENCING DATAEvolutionBioinformaticsEcology (disciplines)GenomicsBiology010603 evolutionary biology[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesPolyploidBehavior and SystematicskasvitEpigeneticsEcosystemEcology Evolution Behavior and Systematics030304 developmental biologyHERB HELLEBORUS-FOETIDUSPhenotypic plasticityBioinformatics ; Ecological Epigenetics ; Genomics ; Phenotypic Plasticity ; Response To EnvironmentAmbientaleResponse to environmentDNA Methylation15. Life on landEcological realismPlant ecology030104 developmental biologyARABIDOPSIS-THALIANABioinformatics ecological epigenetics genomics phenotypic plasticity response to environmentAdaptation[SDE.BE]Environmental Sciences/Biodiversity and EcologyNATURAL-POPULATIONS
researchProduct

Morphological and genetic analyses reveal a cryptic species complex in the echinoid Echinocardium cordatum and rule out a stabilizing selection expla…

2014

14 pages; International audience; Preliminary analyses revealed the presence of at least five mitochondrial clades within the widespread sea urchin Echinocardium cordatum (Spatangoida). In this study, we analyzed the genetic (two mitochondrial and two nuclear sequence loci) and morphological characteristics (20 indices) from worldwide samples of this taxon to establish the species limits, morphological diversity and differentiation. Co-occurring spatangoid species were also analyzed with mitochondrial DNA. The nuclear sequences confirm that mitochondrial lineages correspond to true genetic entities and reveal that two clades (named A and B1) hybridize in their sympatry area, although a more…

0106 biological sciences0301 basic medicineEchinocardium cordatumMorphologyMitochondrial DNASpecies complexZoologyBiology[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyDNA Mitochondrial010603 evolutionary biology01 natural sciences03 medical and health sciencesEffective population sizeGenetic variationGeneticsAnimals14. Life underwaterSelection GeneticStabilizing selectionCladeMolecular BiologyEcology Evolution Behavior and SystematicsCell NucleusModels Genetic[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Genetic Variationbiology.organism_classificationMitochondriaMitochondrialEurope030104 developmental biologyTaxonCryptic-species[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Sea UrchinsEPIC[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy
researchProduct

Surrounding pathogens shape maternal egg care but not egg production in the European earwig

2017

Earwig mothers increase egg care when pathogens are present in the nest, but do not adapt the quantity and quality of their eggs accordingly. Our results confirm that parents can both detect the presence of microbial pathogens in their nesting area and develop pre-hatching behavioral strategies to reduce the associated risk of pathogen infection. These findings overall emphasize the central importance of pathogens in the evolution of parental care in animals.Twitter: @JMeunierEarwig

0106 biological sciences0301 basic medicineEcology[SDV]Life Sciences [q-bio][SDV.BA]Life Sciences [q-bio]/Animal biologyZoologyBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesHerd immunity[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology03 medical and health sciences030104 developmental biologyNestEarwigAnimal Science and ZoologyPaternal careComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsBehavioral Ecology
researchProduct

Social immunity: why we should study its nature, evolution and functions across all social systems.

2018

Mounting defences against pathogens is a necessity for all animals. Although these defences have long been known to rely on individual processes such as the immune system, recent studies have emphasized the importance of social defences for group-living hosts. These defences, called social immunity, have been mostly studied in eusocial insects such as bees, termites and ants, and include, for instance, mutual cleaning and waste management. Over the last few years, however, a growing number of works called for a broader exploration of social immunity in non-eusocial species. In this review, we summarize the rationales of this call and examine why it may provide major insights into our curren…

0106 biological sciences0301 basic medicineEvolution of eusocialityInsecta[SDV]Life Sciences [q-bio]Biology010603 evolutionary biology01 natural sciencesHerd immunitySocial life03 medical and health sciencesAnimalsSocial BehaviorComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsCognitive scienceBehavior Animal[SDV.BA]Life Sciences [q-bio]/Animal biologyEusocialityBiological Evolution[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology030104 developmental biologyConceptual frameworkSocial systemInsect ScienceHost-Pathogen InteractionsSocial evolutionCurrent opinion in insect science
researchProduct

A self-inducible heterologous protein expression system in Escherichia coli

2016

AbstractEscherichia coli is an important experimental, medical and industrial cell factory for recombinant protein production. The inducible lac promoter is one of the most commonly used promoters for heterologous protein expression in E. coli. Isopropyl-β-D-thiogalactoside (IPTG) is currently the most efficient molecular inducer for regulating this promoter’s transcriptional activity. However, limitations have been observed in large-scale and microplate production, including toxicity, cost and culture monitoring. Here, we report the novel SILEX (Self-InducibLe Expression) system, which is a convenient, cost-effective alternative that does not require cell density monitoring or IPTG inducti…

0106 biological sciences0301 basic medicineExpression systemslac operonHeterologousGene ExpressionmechanismLac repressorBiology[ SDV.MP.BAC ] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologymedicine.disease_cause01 natural sciencesArticlelaw.inventionApplied microbiologylactose03 medical and health scienceslawlac repressor010608 biotechnologyt1r3 taste receptor[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Gene expressionmedicineEscherichia coliFood and NutritionInducerstationary-phaserecombinant geneinducerEscherichia coliMultidisciplinaryhsp70PromoterMolecular biology[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyRecombinant Proteins030104 developmental biologycloned genesBiochemistry[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Alimentation et NutritionRecombinant DNA[SDV.BBM.GTP] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]bacteriophage-t7 rna-polymerase[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
researchProduct

Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos.

2017

WOS: 000397335400001

0106 biological sciences0301 basic medicineGene FlowGenotypeLocal adaptationPopulationGenes MHC Class II010603 evolutionary biology01 natural sciencesIntraspecific competitionGene flowMHC GenesBirds03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[ SDV.IMM ] Life Sciences [q-bio]/Immunology14. Life underwaterSelection GeneticeducationEcology Evolution Behavior and SystematicsAllelic diversity ; Local adaptation ; MHC genes ; Pathogen-mediated balancing selection ; Greater flamingosAllelesLocal adaptationeducation.field_of_studyGenetic diversitybiologyHistocompatibility Antigens Class IIGenetic VariationAllelic diversityMHC genesExonsbiology.organism_classificationPathogen-mediated balancing selection030104 developmental biologyEvolutionary biologyGreater flamingosBiological dispersal[SDV.IMM]Life Sciences [q-bio]/ImmunologyGreater flamingoAdaptation[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisResearch Article
researchProduct

The legacy of a vanished sea: a high level of diversification within a European freshwater amphipod species complex driven by 15 My of Paratethys reg…

2016

16 pages; International audience; The formation of continental Europe in the Neogene was due to the regression of the Tethys Ocean and of the Paratethys Sea. The dynamic geology of the area and repetitious transitions between marine and freshwater conditions presented opportunities for the colonization of newly emerging hydrological networks and diversification of aquatic biota. Implementing mitochondrial and nuclear markers in conjunction with a large-scale sampling strategy, we investigated the impact of this spatiotemporal framework on the evolutionary history of a freshwater crustacean morphospecies. The Gammarus balcanicus species complex is widely distributed in the area previously oc…

0106 biological sciences0301 basic medicineGenetic MarkersSpecies complexPleistoceneMolecular Sequence DataFresh WaterBiologyphylogeographyNeogene[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA Mitochondrial03 medical and health sciencesPaleontologyancestral state reconstructionPolyphylyGeneticsAnimalsAmphipoda14. Life underwaterEndemismEcology Evolution Behavior and Systematicsmolecular phylogenyPhylogenyInvertebrate[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologycryptic diversitySpatial AnalysisEcologycrustaceansorigin of freshwater faunaBayes TheoremSequence Analysis DNA15. Life on landTethys OceanBiological EvolutionEuropePhylogeography030104 developmental biology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyMolecular ecology
researchProduct

Single-Spore Extraction for Genetic Analyses of Arbuscular Mycorrhizal Fungi

2020

International audience; Biomass of arbuscular mycorrhizal fungi (AMF, Glomeromycota) is often only available in small quantities as these fungi are obligate biotrophs and many species are difficult to cultivate under controlled conditions. Here, I describe a simple, efficient approach to produce crude extracts from single or a small number of spores that can be used for genotyping AMF.

0106 biological sciences0301 basic medicineGenotypingbiologyObligatefungiExtraction (chemistry)Single-spore extractionBiomassArbuscular mycorrhizal fungibiology.organism_classification01 natural sciencesSporeGlomeromycota03 medical and health sciences030104 developmental biology[SDE]Environmental SciencesBotanyGlomeromycota010606 plant biology & botany
researchProduct

Genetic Distinctiveness Highlights the Conservation Value of a Sicilian Manna Ash Germplasm Collection Assigned to Fraxinus angustifolia (Oleaceae)

2020

The cosmopolitan genus Fraxinus comprises about 40 species occupying several habitats in the Northern Hemisphere. With some species hybridizing and sharing genetic variants, questions remain on the species assignment of germplasm within the genus Fraxinus despite numerous species-specific assessments. A multidisciplinary approach was employed to provide a definitive insight into the genetics of an endangered Fraxinus &ldquo

0106 biological sciences0301 basic medicineGermplasmFraxinus ornusEndangered speciesBiodiversity<i>Fraxinus</i> spp.nSSRPlant ScienceFraxinus angustifoliaFraxinus010603 evolutionary biology01 natural sciencesLocal varieties03 medical and health scienceslcsh:BotanyBotanyMannaEcology Evolution Behavior and SystematicsGenetic diversityEcologybiologyFraxinus spp.food and beveragescpSSR15. Life on landMorphological traitsEx situ conservationbiology.organism_classificationlcsh:QK1-989030104 developmental biologylocal varieties nSSR[SDE]Environmental SciencesCytometryPlants
researchProduct