Search results for "SETS"

showing 10 items of 592 documents

Lightweight LCP construction for next-generation sequencing datasets

2012

The advent of "next-generation" DNA sequencing (NGS) technologies has meant that collections of hundreds of millions of DNA sequences are now commonplace in bioinformatics. Knowing the longest common prefix array (LCP) of such a collection would facilitate the rapid computation of maximal exact matches, shortest unique substrings and shortest absent words. CPU-efficient algorithms for computing the LCP of a string have been described in the literature, but require the presence in RAM of large data structures. This prevents such methods from being feasible for NGS datasets. In this paper we propose the first lightweight method that simultaneously computes, via sequential scans, the LCP and B…

Whole genome sequencingGenomics (q-bio.GN)FOS: Computer and information sciencesSequenceBWT; LCP; next-generation sequencing datasetsBWT LCP text indexes next-generation sequencing datasets massive datasetsSettore INF/01 - InformaticaComputer scienceComputationString (computer science)LCP arrayParallel computingData structureDNA sequencingSubstringBWTLCPFOS: Biological sciencesComputer Science - Data Structures and AlgorithmsQuantitative Biology - GenomicsData Structures and Algorithms (cs.DS)next-generation sequencing datasets
researchProduct

ARTIFICIAL INTELLIGENCE VS DESIGNER: THE IMPACT OF ARTIFICIAL INTELLIGENCE ON DESIGN PRACTICE

2021

Technological advances, including the use of possibilities offered by artificial intelligence (AI), have become an area of strategic importance and a key driver of economic development. AI today has been integrated into a variety of economies, the design industry is no exception: AI is being increasingly applied in the development of design products and services. However, as technological breakthroughs rapidly shift the borders between the work tasks performed by humans and those performed by machines and algorithms, global labor markets are undergoing major transformations. This raises the question: how are these changes affecting and will continue to affect designers’ work in the future? …

Work (electrical)business.industryComputer scienceInternet resourcesartificial intelligence designer future case studyKey (cryptography)Artificial intelligencebusinessProfessional activityVariety (cybernetics)Skill setsTest (assessment)SOCIETY. INTEGRATION. EDUCATION. Proceedings of the International Scientific Conference
researchProduct

Extending CSG with projections: Towards formally certified geometric modeling

2015

We extend traditional Constructive Solid Geometry (CSG) trees to support the projection operator. Existing algorithms in the literature prove various topological properties of CSG sets. Our extension readily allows these algorithms to work on a greater variety of sets, in particular parametric sets, which are extensively used in CAD/CAM systems. Constructive Solid Geometry allows for algebraic representation which makes it easy for certification tools to apply. A geometric primitive may be defined in terms of a characteristic function, which can be seen as the zero-set of a corresponding system along with inequality constraints. To handle projections, we exploit the Disjunctive Normal Form,…

[ INFO ] Computer Science [cs]Disjoint setsDisjunctive normal formIndustrial and Manufacturing EngineeringProjection (linear algebra)Interval arithmeticConstructive solid geometryConstructive solid geometry[INFO.INFO-NI]Computer Science [cs]/Networking and Internet Architecture [cs.NI][INFO.INFO-RB]Computer Science [cs]/Robotics [cs.RO]Homotopy equivalenceGeometric primitiveBinary expression tree[INFO]Computer Science [cs]ProjectionComputingMilieux_MISCELLANEOUSMathematicsDiscrete mathematics[INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB]HomotopyFormal methodsDisjunctive normal formComputer Graphics and Computer-Aided Design[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]Computer Science ApplicationsAlgebra[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV][INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]
researchProduct

Towards A Twitter Observatory: A Multi-Paradigm Framework For Collecting, Storing And Analysing Tweets

2016

International audience; In this article we show how a multi-paradigm framework can fulfil the requirements of tweets analysis and reduce the waiting time for researchers that use computational resources and storage systems to support large-scale data analysis. The originality of our approach is to combine concerns about data harvesting, data storage, data analysis and data visualisation into a framework that supports inductive reasoning in multidisciplinary scientific research. Our main contribution is a polyglot storage system with a generic data model to support logical data independence and a set of tools that can provide a suitable solution for mixing different types of algorithms in or…

[ INFO.INFO-IR ] Computer Science [cs]/Information Retrieval [cs.IR][ INFO ] Computer Science [cs]Computer scienceknowledge discovery02 engineering and technology[INFO] Computer Science [cs][INFO.INFO-SI]Computer Science [cs]/Social and Information Networks [cs.SI]Data modelingmassive datasetsopen source softwareData visualization[ INFO.INFO-IT ] Computer Science [cs]/Information Theory [cs.IT]polyglot storage020204 information systems0202 electrical engineering electronic engineering information engineering[INFO]Computer Science [cs]Twitter analysis . SystemsComputingMilieux_MISCELLANEOUS[INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB]business.industryPolyglotInductive reasoningData science[SPI.TRON] Engineering Sciences [physics]/ElectronicsData independence[ SPI.TRON ] Engineering Sciences [physics]/Electronics[SPI.TRON]Engineering Sciences [physics]/ElectronicsData model[INFO.INFO-IT]Computer Science [cs]/Information Theory [cs.IT][INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR]020201 artificial intelligence & image processing[INFO.INFO-IR] Computer Science [cs]/Information Retrieval [cs.IR][INFO.INFO-IT] Computer Science [cs]/Information Theory [cs.IT]Data architecturebusinessSoftware architecture
researchProduct

Sobolev and bounded variation functions on metric measure spaces

2014

International audience

[ MATH ] Mathematics [math]DifferentiabilityEquationsSets010102 general mathematicsTransport[MATH] Mathematics [math]01 natural sciencesDerivationsFine PropertiesFinite Perimeter010104 statistics & probabilityRicci Curvature BoundsLipschitz Functions0101 mathematics[MATH]Mathematics [math]InequalitiesComputingMilieux_MISCELLANEOUS
researchProduct

ÉQUATIONS DIFFÉRENTIELLES À COEFFICIENTS DANS DES CORPS DE SÉRIES GÉNÉRALISÉES.

2007

We express the connection between the support of some equations and those of generalized series solutions. On the one hand we prove that any real power series solution of a sub-analytic differential equation belong to a lattice (i.e. an additive sub semi-group of positive reals). On the other hand we consider the field Mr of series with well-ordered support included in the Hahn product Hr with finite rank r (i.e. the lexicographic product of r copies of the reals). We equip Mr with a "Hardy type" derivation and define some well-ordered sets T1, ..., Tr such that : for all equation F(y,...,y(n))=0 with F in Mr[[Y0,...,Yn]] and whose support Supp F is a well-ordered subset of Hr, and for all …

[ MATH ] Mathematics [math]corps valué[MATH] Mathematics [math]well-ordered sets.Generalized (power) seriesensembles bien ordonnésfonction sous-analytiqueensembles bien ordonnés.valued fields[MATH]Mathematics [math]Séries généraliséesdéveloppement asymp-<br />totiquevaluationsub-analytic functionsasymptotic<br />development
researchProduct

Characterization of the Clarke regularity of subanalytic sets

2017

International audience; In this note, we will show that for a closed subanalytic subset $A \subset \mathbb{R}^n$, the Clarke tangential regularity of $A$ at $x_0 \in A$ is equivalent to the coincidence of the Clarke's tangent cone to $A$ at $x_0$ with the set \\$$\mathcal{L}(A, x_0):= \bigg\{\dot{c}_+(0) \in \mathbb{R}^n: \, c:[0,1]\longrightarrow A\;\;\mbox{\it is Lipschitz}, \, c(0)=x_0\bigg\}.$$Where $\dot{c}_+(0)$ denotes the right-strict derivative of $c$ at $0$. The results obtained are used to show that the Clarke regularity of the epigraph of a function may be characterized by a new formula of the Clarke subdifferential of that function.

[ MATH.MATH-OC ] Mathematics [math]/Optimization and Control [math.OC][ MATH ] Mathematics [math]Computer Science::Computer Science and Game Theory021103 operations researchSubanalytic setTangent coneApplied MathematicsGeneral Mathematics010102 general mathematicsTangent coneMathematical analysis0211 other engineering and technologiesSubanalytic sets02 engineering and technologyCharacterization (mathematics)16. Peace & justice01 natural sciencesMSC: Primary 49J52 46N10 58C20; Secondary 34A60Clarke regularity[MATH.MATH-OC]Mathematics [math]/Optimization and Control [math.OC]0101 mathematics[MATH]Mathematics [math]Mathematics
researchProduct

Differential inclusions involving normal cones of nonregular sets in Hilbert spaces

2017

This thesis is dedicated to the study of differential inclusions involving normal cones of nonregular sets in Hilbert spaces. In particular, we are interested in the sweeping process and its variants. The sweeping process is a constrained differential inclusion involving normal cones which appears naturally in several applications such as elastoplasticity, electrical circuits, hysteresis, crowd motion, etc.This work is divided conceptually in three parts: Study of positively alpha-far sets, existence results for differential inclusions involving normal cones and characterizations of Lyapunov pairs for the sweeping process. In the first part (Chapter 2), we investigate the class of positivel…

[ MATH.MATH-OC ] Mathematics [math]/Optimization and Control [math.OC]cône normalMoreau-Yosida regularizationcono normalmétodo de tipo Galerkinfonction distanceGalerkin-like methodMSC: 34A60 49J52 34G25 49J53 34B10 93D30subdiferencial de Clarkeprocessus de rafleInclusión diferencialensembles positivement alpha-far'sweeping processfonctions de Lyapunovsous-différentiel de Clarkeprocesos de arrastrefunción distanciaLyapunov functionsconjuntos positivamente alpha-farFunciones de Lyapunovméthode de type Galerkinrégularisation de Moreau-YosidaDifferential inclusions[MATH.MATH-OC] Mathematics [math]/Optimization and Control [math.OC]Clarke subdifferentialregularización de Moreau-YosidaDistance functionInclusion différentielle[MATH.MATH-OC]Mathematics [math]/Optimization and Control [math.OC]Normal conepositively alpha-far sets
researchProduct

Gelled Electrolyte Containing Phosphonium Ionic Liquids for Lithium-Ion Batteries

2018

In this work, new gelled electrolytes were prepared based on a mixture containing phosphonium ionic liquid (IL) composed of trihexyl(tetradecyl)phosphonium cation combined with bis(trifluoromethane)sulfonimide [TFSI] counter anions and lithium salt, confined in a host network made from an epoxy prepolymer and amine hardener. We have demonstrated that the addition of electrolyte plays a key role on the kinetics of polymerization but also on the final properties of epoxy networks, especially thermal, thermo-mechanical, transport, and electrochemical properties. Thus, polymer electrolytes with excellent thermal stability (&gt

[CHIM.POLY] Chemical Sciences/PolymersMaterials scienceGeneral Chemical Engineeringchemistry.chemical_elementelectrolytes02 engineering and technologyElectrolyte010402 general chemistryElectrochemistry01 natural sciences7. Clean energyArticlelcsh:Chemistryionic liquidschemistry.chemical_compoundIonic conductivityGeneral Materials ScienceThermal stabilityPhosphoniumComputingMilieux_MISCELLANEOUS[CHIM.MATE] Chemical Sciences/Material chemistrythermosets[CHIM.MATE]Chemical Sciences/Material chemistry021001 nanoscience & nanotechnology0104 chemical sciences[CHIM.POLY]Chemical Sciences/Polymerslcsh:QD1-999Lithium saltschemistryChemical engineeringPolymerizationIonic liquidLithium0210 nano-technology
researchProduct

Single-cell RNA sequencing unveils the shared and the distinct cytotoxic hallmarks of human TCRVδ1 and TCRVδ2 γδ T lymphocytes

2019

γδ T lymphocytes represent ∼1% of human peripheral blood mononuclear cells and even more cells in most tissues of vertebrates. Although they have important anticancer functions, most current single-cell RNA sequencing (scRNA-seq) studies do not identify γδ T lymphocytes because their transcriptomes at the single-cell level are unknown. Here we show that high-resolution clustering of large scRNA-seq datasets and a combination of gene signatures allow the specific detection of human γδ T lymphocytes and identification of their T cell receptor (TCR)Vδ1 and TCRVδ2 subsets in large datasets from complex cell mixtures. In t -distributed stochastic neighbor embedding plots from blood and tumor sa…

[SDV.BIO]Life Sciences [q-bio]/BiotechnologyLymphocyte[SDV]Life Sciences [q-bio]CD8-Positive T-Lymphocytes[SDV.IMM.II]Life Sciences [q-bio]/Immunology/Innate immunityTranscriptome0302 clinical medicineT-Lymphocyte Subsets[SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]Cytotoxic T cellsingle-cell RNA-sequencingCells CulturedT-lymphocytesComputingMilieux_MISCELLANEOUSCancer0303 health sciences[SDV.MHEP] Life Sciences [q-bio]/Human health and pathologyMultidisciplinarygamma delta T lymphocyteReceptors Antigen T-Cell gamma-deltaCell biologyKiller Cells Naturalmedicine.anatomical_structurePNAS Plus030220 oncology & carcinogenesis[SDV.IMM]Life Sciences [q-bio]/Immunologyγδ T lymphocyteexpression des gènesAdultT cellBiologylymphocytePeripheral blood mononuclear cell03 medical and health sciencesAntigenséquençage arnr 16smedicineHumansCell Proliferation030304 developmental biologyhuman immunologyBase SequenceSequence Analysis RNAT-cell receptor[SDV.BIO] Life Sciences [q-bio]/BiotechnologyLeukocytes MononuclearImmunologic MemorytranscriptomeCD8[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
researchProduct