Search results for "SOIL MICROBIOLOGY"

showing 3 items of 213 documents

Changes in gene expression during adaptation of Listeria monocytogenes to the soil environment

2011

project SEST 009; International audience; Listeria monocytogenes is a ubiquitous opportunistic pathogen responsible for listeriosis. In order to study the processes underlying its ability to adapt to the soil environment, whole-genome arrays were used to analyse transcriptome modifications 15 minutes, 30 minutes and 18 h after inoculation of L. monocytogenes EGD-e in soil extracts. Growth was observed within the first day of incubation and large numbers were still detected in soil extract and soil microcosms one year after the start of the experiment. Major transcriptional reprofiling was observed. Nutrient acquisition mechanisms (phosphoenolpyruvate-dependent phosphotransferase systems and…

listeriaTime Factorslisteria monocytogenes[SDV]Life Sciences [q-bio]Gene ExpressionATP-binding cassette transporterSoil Chemistrymedicine.disease_causemicroorganisme du solPhosphotransferaseTranscriptomeSoilMolecular Cell BiologySoil MicrobiologyOligonucleotide Array Sequence Analysisbactérie2. Zero hungerRegulation of gene expression0303 health sciencesMultidisciplinaryReverse Transcriptase Polymerase Chain ReactionQRGene Expression Regulation DevelopmentalAdaptation PhysiologicalBacterial PathogensChemistry[SDE]Environmental SciencesMedicinelisteria monocytogenes ;relation sol microorganismeSoil microbiologyResearch ArticleScienceEnvironmentBiologyMicrobiologyMicrobial EcologyMicrobiology03 medical and health sciencesbiologie du solListeria monocytogenesmedicineEnvironmental ChemistrylistérioseBiologyEcosystem030304 developmental biologyrelation sol microorganismeGram Positiveécologie microbienne030306 microbiologyCatabolismGene Expression ProfilingGene Expression Regulation BacterialRegulonTranscriptome
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Global diversity and geography of soil fungi

2014

Fungi play integral roles in soil nutrient cycling, but the determinants of fungal diversity and biogeographic patterns of key functional groups remain poorly understood. By using pyrosequencing data from hundreds of globally distributed soil samples, we demonstrated fungal diversity that expands upon the taxonomic and molecular diversity recorded so far. Except for ectomycorrhizal symbionts, fungal functional group richness was unrelated to plant diversity and plant-to-fungus richness ratio declined exponentially towards the poles. Climatic factors, followed by edaphic and spatial variables, constituted the best predictors of fungal richness and community composition at the global scale. F…

media_common.quotation_subjectBiodiversityDIVERSITYfungi diversityBiologyPHYLOGEOGRAPHYCiencias BiológicasMETABARCODINGEcosystemMacroecologymedia_commonMultidisciplinaryEcologySettore BIO/02 - Botanica SistematicafungiFUNGIGlobal changeEdaphicEcologíaSpecies richnessMicologíaSoil microbiologyhuman activitiesCIENCIAS NATURALES Y EXACTASDiversity (politics)
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Microbial technologies for the discovery of novel bioactive metabolites

2002

Soil microbes represent an important source of biologically active compounds. These molecules present original and unexpected structure and are selective inhibitors of their molecular targets. At Biosearch Italia, discovery of new bioactive molecules is mostly carried out through the exploitation of a proprietary strain collection of over 50000 strains, mostly unusual genera of actinomycetes and uncommon filamentous fungi. A critical element in a drug discovery based on microbial extracts is the isolation of unexploited groups of microorganisms that are at the same time good producers of secondary metabolites. Molecular genetics can assist in these efforts. We will review the development an…

medicine.medical_specialtyGenetic VectorsBioengineeringComputational biologyBiologySettore BIO/19 - Microbiologia Generalemedicine.disease_causeApplied Microbiology and BiotechnologyStreptomycesGenomePolymerase Chain ReactionMicrobiologySpecies SpecificityMolecular geneticsmedicineGeneEscherichia coliSoil MicrobiologyDrug discoveryGeneral MedicineGene Expression Regulation Bacterialbiology.organism_classificationIsolation (microbiology)ActinobacteriaGenetic VectorDirected Molecular EvolutionSoil microbiologyActinobacteria; Directed Molecular Evolution; Genetic Vectors; Polymerase Chain Reaction; Soil Microbiology; Species Specificity; Gene Expression Regulation BacterialBiotechnology
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