Search results for "SOLID-PHASE"

showing 10 items of 178 documents

Fluorenylmethoxycarbonyl-ProtectedO-Glycosyl-N-methyl Amino Acids: Building Blocks for the Synthesis of Conformationally Tuned Glycopeptide Antigens

2015

Peptide antibiotics often contain N-methylated amino acids. These N-methylamino components enhance the metabolic stability and strongly influence the conformational behavior of these peptide drugs. N-Methyl-O-glycosyl amino acids, in particular, threonine and serine derivatives, are unknown so far. Fmoc-protected N-methyl-O-glycosyl-threonine and -serine building blocks, including sialyl TN antigens, have been synthesized for the first time by converting the Fmoc-protected O-glycosyl amino acids or their tert-butyl esters into the corresponding oxazolidinones followed by reductive ring-opening. These new components are considered interesting for the construction of modified mucin glycopepti…

chemistry.chemical_classificationChemistryOrganic ChemistryMucinPeptideCombinatorial chemistryGlycopeptideAmino acidSerinechemistry.chemical_compoundSolid-phase synthesisGlycosylPhysical and Theoretical ChemistryThreonineEuropean Journal of Organic Chemistry
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Synthesis, structural aspects and bioactivity of the marine cyclopeptide hymenamide C

2001

Abstract Head-to-tail proline containing cyclopeptide hymenamide C [cyclo(Leu-Trp-Pro 3 -Phe-Gly-Pro 6 -Glu); 1 ], isolated from a marine sponge and for which a preliminary immunomodulating activity was reported, was efficiently synthesized by a three-dimensional orthogonal solid-phase strategy (Fmoc/tBu/Allyl) via anchoring the ω -carboxyl function of the glutamic acid to the solid support (PAC–PEG–PS). The linear precursor was entirely assembled and subsequently cyclized on resin, yielding a major product identical to the natural hymenamide C and a minor one, a geometric isomer of hymenamide C ( 2 ), differing for the geometry of peptide linkages at Pro residues. Both the ‘proline-rich’ c…

chemistry.chemical_classificationChemistryStereochemistryOrganic ChemistryElastaseDegranulationPeptideBiological activityGlutamic acidBiochemistryIn vitroSolid-phase synthesisDrug DiscoveryProlineTetrahedron
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Chemoenzymatic-Chemical Synthesis of a (2-3)-Sialyl T Threonine Building Block and Its Application to the Synthesis of the N-Terminal Sequence of Leu…

2001

Protection of all functional groups of the carbohydrate portion of the chemoenzymatically synthesized sialyl T threonine ester 1 (R=R1 =H, R2 =tBu, Fmoc=9-fluorenylmethoxycarbonyl) and subsequent acidolysis of the tert-butyl ester afforded the building block 2 (R=Ac, R1 =Me, R2 =H). The latter is a useful tool in the solid-phase synthesis of the N-terminal sequence 3 of the leukemia-associated leukosialin.

chemistry.chemical_classificationChemistryStereochemistrySequence (biology)General ChemistryCarbohydratemedicine.diseaseChemical synthesisCombinatorial chemistryCatalysisAmino acidLeukemiaSolid-phase synthesismedicineLeukosialinThreonineAngewandte Chemie (International ed. in English)
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Direct Solid Phase Microextraction for the Determination of BTEX in Water and Wastewater

1996

chemistry.chemical_classificationChromatographychemistryWastewaterGeneral Chemical EngineeringOrganic matterSolid phase extractionBTEXWater pollutionSolid-phase microextraction
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In-tube solid-phase microextraction coupled by in valve mode to capillary LC-DAD: Improving detectability to multiresidue organic pollutants analysis…

2009

Abstract A simple and fast capillary chromatographic method has been developed to identify and quantify organic pollutants at sub-ppb levels in real water samples. The major groups of pesticides (organic halogens, organic phosphorous, and organic nitrogen compounds), some hydrocarbons (polycyclic aromatic hydrocarbons), phthalates and some phenols such as phenol and bisphenol A (endocrine disruptors) were included in this study. The procedure was based on coupling, in-tube solid-phase microextraction (IT-SPME) by using a conventional GC capillary column (95% methyl–5% phenyl substituted backbone, 80 cm × 0.32 mm i.d., 3 μm film thickness) in the injection valve to capillary liquid chromatog…

chemistry.chemical_classificationDetection limitChromatographyChemistryCapillary actionOrganic ChemistryAnalytical chemistryGeneral MedicineReversed-phase chromatographySolid-phase microextractionSensitivity and SpecificityBiochemistryHigh-performance liquid chromatographyAnalytical ChemistryHydrocarbonSeawaterSample preparationPolycyclic HydrocarbonsLasers SemiconductorOrganic ChemicalsSolid Phase MicroextractionWater Pollutants ChemicalChromatography LiquidJournal of Chromatography A
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Indirect analysis of urea herbicides from environmental water using solid-phase microextraction.

2000

We described here a solid-phase microextraction procedure used to extract six urea pesticides-- chlorsulfuron, fluometuron, isoproturon, linuron, metobromuron and monuron--from environmental samples. Two polydimethylsiloxanes and a polyacrylate fiber (PA) are compared. The extraction time, pH control, addition of NaCl to the water and the influence of organic matter such as humic acid on extraction efficiency were examined to achieve a sensitive method. Determination was carried out by gas chromatography with nitrogen-phosphorus detection. The proposed method requires the extraction of 2 ml of sample (pH 4, 14.3%, w/v, NaCl) for 60 min with the PA fiber. The limits of detection range from 0…

chemistry.chemical_classificationDetection limitChromatographyFluometuronHerbicidesPhenylurea CompoundsOrganic ChemistryReproducibility of ResultsGeneral MedicineSolid-phase microextractionBiochemistrySensitivity and SpecificityAnalytical Chemistrychemistry.chemical_compoundchemistryHumic acidOrganic matterSample preparationSolid phase extractionGas chromatographyWater Pollutants ChemicalJournal of chromatography. A
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C-Glycosyl amino acids through hydroboration-cross-coupling of exo-glycals and their application in automated solid-phase synthesis.

2013

O-Glycosylation is one of the most important post-translational modifications of proteins. The attachment of carbohydrates to the peptide backbone influences the conformation as well as the solubility of the conjugates and can even be essential for binding to specific ligands in cell-cell interactions or for active transport over membranes. This makes glycopeptides an interesting class of compounds for medical applications. To enhance the long-term availability of these molecules in vivo, the stabilization of the glycosidic bond between the amino acid residue and the carbohydrate is of interest. The described modular approach affords β-linked C-glycosyl amino acids by a sequence of Petasis …

chemistry.chemical_classificationGlycosylationStereochemistryOrganic ChemistryMucin-1CarbohydratesGlycopeptidesGlycosidic bondGeneral ChemistryCatalysisCoupling reactionGlycopeptideAmino acidHydroborationchemistry.chemical_compoundSolid-phase synthesischemistrySuzuki reactionHumansGlycosylAmino AcidsProtein Processing Post-TranslationalSolid-Phase Synthesis TechniquesChemistry (Weinheim an der Bergstrasse, Germany)
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Synthesis of glycosylated β3-homo-threonine conjugates for mucin-like glycopeptide antigen analogues

2010

Glycopeptides from the mucin family decorated with tumour-associated carbohydrate antigens (TACA) have proven to be important target structures for the development of molecularly defined anti-cancer vaccines. The strategic incorporation of β-amino acid building blocks into such mucin-type sequences offers the potential to create pseudo-glycopeptide antigens with improved bioavailability for tumour immunotherapy. Towards this end, TN and TF antigen conjugates O-glycosidically linked to Fmoc-β3-homo-threonine were prepared in good yield via Arndt–Eistert homologation of the corresponding glycosyl α-amino acid derivative. By incorporation of TN-Fmoc-β3hThr conjugate into the 20 amino acid tand…

chemistry.chemical_classificationMUC1 antigenssolid-phase synthesisChemistryGlycoconjugateOrganic Chemistryglycosylamino acidsβ3-homo-threonineCombinatorial chemistryGlycopeptideAmino acidlcsh:QD241-441chemistry.chemical_compoundglycopeptideSolid-phase synthesisBiochemistryAntigenlcsh:Organic chemistryGlycosyllcsh:QThreoninelcsh:ScienceMUC1Beilstein Journal of Organic Chemistry
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Synthetic Tumor-Associated Glycopeptide Antigens from the Tandem Repeat Sequence of the Epithelial Mucin MUC4

2004

In cancer research, the development of vaccines against tumor-associated antigens is of particular interest. Epithelial cells express mucin type glycoproteins, which are extensively O-glycosylated. In case of cancer, the expression of these mucins is increased, and their carbohydrate side chains show an aberrant glycosylation pattern. A set of single and double glycosylated hexadecapeptides representing the tandem repeat sequence of the epithelial mucin MUC4 carrying different tumor-associated carbohydrate antigens was prepared by sequential solid-phase glycopeptide synthesis. The crucial glycosyl amino acid building blocks containing the T N , T, sialyl-T N and (2,6)-sialyl-T antigens were…

chemistry.chemical_classificationOrganic ChemistryMucinGeneral MedicineMolecular biologyCatalysisGlycopeptideAmino acidcarbohydrates (lipids)chemistry.chemical_compoundSolid-phase synthesisAntigenchemistryBiochemistryGalactosamineGlycosylThreonineGlycoproteinSynthesis
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Combinatorial synthesis of amino acid- and peptide-carbohydrate conjugates on solid phase

2004

Carbohydrates are useful polyfunctional scaffold molecules which allow the selective attachment of a number of different side chains. The combinatorial solid phase synthesis of diverse amino acid or peptide conjugates of a polyfunctional glucose scaffold based on a set of selectively removable and orthogonally stable protecting groups is described. The resulting carbohydrate-peptide hybrids constitute potential turn mimetics.

chemistry.chemical_classificationPeptidomimeticOrganic ChemistryPeptideCarbohydrateBiochemistryCombinatorial chemistryAmino acidTurn (biochemistry)Solid-phase synthesischemistryDrug DiscoverySide chainConjugateTetrahedron
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